RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 TPT1P13693 172 aaKnown RBP8.64□□□□□ -1.03
CBWD3-208ENST00000612050 FGF8P55075 233 aaPredicted RBP8.64□□□□□ -1.03
CBWD3-208ENST00000612050 UBE2G1P62253 170 aa8.64□□□□□ -1.03
CBWD3-208ENST00000612050 PLECQ15149 4684 aaKnown RBP8.64□□□□□ -1.03
CBWD3-208ENST00000612050 TDRG1Q3Y452 100 aa8.64□□□□□ -1.03
CBWD3-208ENST00000612050 DPPA3Q6W0C5 159 aa8.64□□□□□ -1.03
CBWD3-208ENST00000612050 PCNPQ8WW12 178 aaKnown RBP8.64□□□□□ -1.03
CBWD3-208ENST00000612050 SGK494Q96LW2 274 aa8.64□□□□□ -1.03
CBWD3-208ENST00000612050 PRO0255Q9UI72 69 aa8.64□□□□□ -1.03
CBWD3-208ENST00000612050 M0R2P5 195 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 GCGP01275 180 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 PFN1P07737 140 aaKnown RBP8.63□□□□□ -1.03
CBWD3-208ENST00000612050 CST9LP1Q5W188 147 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 CYTL1Q9NRR1 136 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 ICOSQ9Y6W8 199 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 DNAH1Q9P2D7 4330 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 A6NJY4 79 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 PEX7O00628 323 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 IGHV3-53P01767 116 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 HOXA5P20719 270 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 ZNF726P1Q15940 193 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 TTC32Q5I0X7 151 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 FAM213BQ8TBF2 198 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 SFT2D1Q8WV19 159 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 MDFICQ9P1T7 246 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 HHLA3Q9XRX5 114 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 ARL2-SNX15V9GYD0 113 aa8.63□□□□□ -1.03
CBWD3-208ENST00000612050 FAM74A7A6NL05 159 aa8.62□□□□□ -1.03
CBWD3-208ENST00000612050 S100A4P26447 101 aaKnown RBP8.62□□□□□ -1.03
CBWD3-208ENST00000612050 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
CBWD3-208ENST00000612050 TMUB2Q71RG4 321 aa8.62□□□□□ -1.03
CBWD3-208ENST00000612050 OR4C5Q8NGB2 326 aa8.62□□□□□ -1.03
CBWD3-208ENST00000612050 RASL10AQ92737 203 aa8.62□□□□□ -1.03
CBWD3-208ENST00000612050 FMC1Q96HJ9 113 aa8.62□□□□□ -1.03
CBWD3-208ENST00000612050 HYDINQ4G0P3 5121 aa8.61□□□□□ -1.03
CBWD3-208ENST00000612050 FABP5P3A8MUU1 101 aa8.61□□□□□ -1.03
CBWD3-208ENST00000612050 CIDEAO60543 219 aa8.61□□□□□ -1.03
CBWD3-208ENST00000612050 ORM1P02763 201 aa8.61□□□□□ -1.03
CBWD3-208ENST00000612050 TYMSP04818 313 aa8.61□□□□□ -1.03
CBWD3-208ENST00000612050 FHITP49789 147 aa8.61□□□□□ -1.03
CBWD3-208ENST00000612050 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
CBWD3-208ENST00000612050 LGALSLQ3ZCW2 172 aaPredicted RBP8.61□□□□□ -1.03
CBWD3-208ENST00000612050 C1orf134Q5TEV5 83 aa8.61□□□□□ -1.03
CBWD3-208ENST00000612050 Q6ZQT7 251 aa8.61□□□□□ -1.03
CBWD3-208ENST00000612050 C8orf49Q96NF6 230 aa8.61□□□□□ -1.03
CBWD3-208ENST00000612050 ZFP30Q9Y2G7 519 aa8.61□□□□□ -1.03
CBWD3-208ENST00000612050 TRAV4A0A0B4J268 109 aa8.6□□□□□ -1.03
CBWD3-208ENST00000612050 IGHV3-16A0A0C4DH30 117 aa8.6□□□□□ -1.03
CBWD3-208ENST00000612050 C9JCJ5 164 aa8.6□□□□□ -1.03
CBWD3-208ENST00000612050 GNRH2O43555 120 aa8.6□□□□□ -1.03
CBWD3-208ENST00000612050 S100A9P06702 114 aaKnown RBP8.6□□□□□ -1.03
CBWD3-208ENST00000612050 H2AFB1P0C5Y9 115 aa8.6□□□□□ -1.03
CBWD3-208ENST00000612050 AKR1C3P42330 323 aa8.6□□□□□ -1.03
CBWD3-208ENST00000612050 RAB5CP51148 216 aa8.6□□□□□ -1.03
CBWD3-208ENST00000612050 LCE2AQ5TA79 106 aaPredicted RBP8.6□□□□□ -1.03
CBWD3-208ENST00000612050 OR11H4Q8NGC9 324 aa8.6□□□□□ -1.03
CBWD3-208ENST00000612050 TVP23CQ96ET8 276 aa8.6□□□□□ -1.03
CBWD3-208ENST00000612050 LINC00588Q9Y4M8 146 aa8.6□□□□□ -1.03
CBWD3-208ENST00000612050 TRAV34A0A0B4J273 112 aa8.59□□□□□ -1.03
CBWD3-208ENST00000612050 SRIP30626 198 aa8.59□□□□□ -1.03
CBWD3-208ENST00000612050 Q86TA4 180 aa8.59□□□□□ -1.03
CBWD3-208ENST00000612050 TCTE3Q8IZS6 198 aa8.59□□□□□ -1.03
CBWD3-208ENST00000612050 TXNDC17Q9BRA2 123 aa8.59□□□□□ -1.03
CBWD3-208ENST00000612050 Q9H8V8 135 aa8.59□□□□□ -1.03
CBWD3-208ENST00000612050 NBDYA0A0U1RRE5 68 aa8.58□□□□□ -1.04
CBWD3-208ENST00000612050 PRSS29PA6NIE9 313 aa8.58□□□□□ -1.04
CBWD3-208ENST00000612050 IGLV2-11P01706 119 aa8.58□□□□□ -1.04
CBWD3-208ENST00000612050 ASIPP42127 132 aa8.58□□□□□ -1.04
CBWD3-208ENST00000612050 CRYBA4P53673 196 aa8.58□□□□□ -1.04
CBWD3-208ENST00000612050 ZNF876PQ49A33 203 aa8.58□□□□□ -1.04
CBWD3-208ENST00000612050 NEGR1Q7Z3B1 354 aa8.58□□□□□ -1.04
CBWD3-208ENST00000612050 SH2D6Q7Z4S9 175 aa8.58□□□□□ -1.04
CBWD3-208ENST00000612050 ZNRF2Q8NHG8 242 aa8.58□□□□□ -1.04
CBWD3-208ENST00000612050 MBD3L1Q8WWY6 194 aa8.58□□□□□ -1.04
CBWD3-208ENST00000612050 MRPS16Q9Y3D3 137 aaKnown RBP8.58□□□□□ -1.04
CBWD3-208ENST00000612050 NACAE9PAV3 2078 aa8.58□□□□□ -1.04
CBWD3-208ENST00000612050 A0A096LPF7 62 aa8.57□□□□□ -1.04
CBWD3-208ENST00000612050 A0A1B0GV50 99 aa8.57□□□□□ -1.04
CBWD3-208ENST00000612050 PAGE4O60829 102 aa8.57□□□□□ -1.04
CBWD3-208ENST00000612050 FHL2Q14192 279 aa8.57□□□□□ -1.04
CBWD3-208ENST00000612050 FAM162BQ5T6X4 162 aa8.57□□□□□ -1.04
CBWD3-208ENST00000612050 AKAP14Q86UN6 197 aa8.57□□□□□ -1.04
CBWD3-208ENST00000612050 SYT8Q8NBV8 401 aa8.57□□□□□ -1.04
CBWD3-208ENST00000612050 VSIG2Q96IQ7 327 aa8.57□□□□□ -1.04
CBWD3-208ENST00000612050 LINC00479Q96M42 142 aa8.57□□□□□ -1.04
CBWD3-208ENST00000612050 UPK3BQ9BT76 320 aa8.57□□□□□ -1.04
CBWD3-208ENST00000612050 MANBALQ9NQG1 85 aa8.57□□□□□ -1.04
CBWD3-208ENST00000612050 B4DEV8 164 aa8.56□□□□□ -1.04
CBWD3-208ENST00000612050 IFNA1P01562 189 aa8.56□□□□□ -1.04
CBWD3-208ENST00000612050 SFTA3P0C7M3 94 aa8.56□□□□□ -1.04
CBWD3-208ENST00000612050 ZNF80P51504 273 aaPredicted RBP8.56□□□□□ -1.04
CBWD3-208ENST00000612050 ESRGQ1W209 222 aa8.56□□□□□ -1.04
CBWD3-208ENST00000612050 Q6ZR54 194 aa8.56□□□□□ -1.04
CBWD3-208ENST00000612050 ZNF479Q96JC4 524 aa8.56□□□□□ -1.04
CBWD3-208ENST00000612050 PRADC1Q9BSG0 188 aa8.56□□□□□ -1.04
CBWD3-208ENST00000612050 MUC4Q99102 2169 aa8.55□□□□□ -1.04
CBWD3-208ENST00000612050 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
CBWD3-208ENST00000612050 TRBV6-1A0A0K0K1D8 114 aa8.55□□□□□ -1.04
CBWD3-208ENST00000612050 A0A1W2PPQ1 181 aa8.55□□□□□ -1.04
CBWD3-208ENST00000612050 C1QBP02746 253 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms