RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 FSHBP01225 129 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 IGHV4-59P01825 116 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 S100A4P26447 101 aaKnown RBP7.88□□□□□ -1.15
PABPC1-224ENST00000610907 SRSF1Q07955 248 aaKnown RBP eCLIP7.88□□□□□ -1.15
PABPC1-224ENST00000610907 LAGE3Q14657 143 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 MPV17L2Q567V2 206 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 ODF3Q96PU9 254 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 C20orf78Q9BR46 151 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 COX11Q9Y6N1 276 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.88□□□□□ -1.159e-7■■■■□ 25.6
PABPC1-224ENST00000610907 CFAP46Q8IYW2 2715 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 M0R381 172 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 GAS8-AS1O95177 125 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 TGFAP01135 160 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 ELANEP08246 267 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 KIR3DS1Q14943 382 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 BVES-AS1Q5T3Y7 98 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 BOD1L2Q8IYS8 172 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 OR9G4Q8NGQ1 327 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 DCANP1Q8TF63 244 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 DPH3P1Q9H4G8 78 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 ZMAT4Q9H898 229 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 BEX4Q9NWD9 120 aaPredicted RBP7.88□□□□□ -1.15
PABPC1-224ENST00000610907 PHLDA3Q9Y5J5 127 aa7.88□□□□□ -1.15
PABPC1-224ENST00000610907 ASH1LQ9NR48 2969 aaKnown RBP7.88□□□□□ -1.15
PABPC1-224ENST00000610907 KLLNB2CW77 178 aa7.87□□□□□ -1.15
PABPC1-224ENST00000610907 LGALS9O00182 355 aa7.87□□□□□ -1.15
PABPC1-224ENST00000610907 GATA1P15976 413 aaPredicted RBP7.87□□□□□ -1.15
PABPC1-224ENST00000610907 RNASE4P34096 147 aaKnown RBP7.87□□□□□ -1.15
PABPC1-224ENST00000610907 ZNF124Q15973 351 aa7.87□□□□□ -1.15
PABPC1-224ENST00000610907 ANXA2RQ3ZCQ2 193 aa7.87□□□□□ -1.15
PABPC1-224ENST00000610907 LCNL1Q6ZST4 164 aa7.87□□□□□ -1.15
PABPC1-224ENST00000610907 LRRC75A-AS1Q8N1F1 130 aa7.87□□□□□ -1.15
PABPC1-224ENST00000610907 MYOZ3Q8TDC0 251 aa7.87□□□□□ -1.15
PABPC1-224ENST00000610907 TMEM158Q8WZ71 300 aa7.87□□□□□ -1.15
PABPC1-224ENST00000610907 NRGNQ92686 78 aa7.87□□□□□ -1.15
PABPC1-224ENST00000610907 VPREB3Q9UKI3 123 aa7.87□□□□□ -1.15
PABPC1-224ENST00000610907 SPG11Q96JI7 2443 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 CD5LO43866 347 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 NXPH4O95158 308 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 PRSS1P07477 247 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 SMIM17P0DL12 118 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 FGF6P10767 208 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 FXYD7P58549 80 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 ORMDL2Q53FV1 153 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 ANKRD39Q53RE8 183 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 Q6YL49 198 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 Q6ZQT7 251 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 ZNF843Q8N446 348 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 POM121L12Q8N7R1 296 aa7.86□□□□□ -1.15
PABPC1-224ENST00000610907 LGALS1P09382 135 aaKnown RBP7.85□□□□□ -1.15
PABPC1-224ENST00000610907 SNRPD3P62318 126 aaKnown RBP7.85□□□□□ -1.15
PABPC1-224ENST00000610907 SEC11AP67812 179 aa7.85□□□□□ -1.15
PABPC1-224ENST00000610907 ODF1Q14990 250 aa7.85□□□□□ -1.15
PABPC1-224ENST00000610907 C2orf91Q6ZV80 131 aa7.85□□□□□ -1.15
PABPC1-224ENST00000610907 RNF152Q8N8N0 203 aa7.85□□□□□ -1.15
PABPC1-224ENST00000610907 UBE2E2Q96LR5 201 aa7.85□□□□□ -1.15
PABPC1-224ENST00000610907 AP1S3Q96PC3 154 aa7.85□□□□□ -1.15
PABPC1-224ENST00000610907 SMIM2Q9BVW6 85 aa7.85□□□□□ -1.15
PABPC1-224ENST00000610907 USP9XQ93008 2570 aaPredicted RBP7.85□□□□□ -1.15
PABPC1-224ENST00000610907 CSMD1Q96PZ7 3565 aa7.85□□□□□ -1.15
PABPC1-224ENST00000610907 F6UB75 175 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 NPSP0C0P6 89 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 IGHV4-31P0DP07 118 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 FAM159AQ6UWV7 190 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 C18orf15Q96N68 181 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 DKK2Q9UBU2 259 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 IGKV3-7A0A075B6H7 116 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 TRAV26-2A0A0B4J265 109 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 A1L4Q6 167 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 LINC01549A6NIU2 74 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 J3KRW8 73 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 DPM2O94777 84 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 IGKCP01834 107 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 RNASE3P12724 160 aaKnown RBP7.84□□□□□ -1.15
PABPC1-224ENST00000610907 HLA-DRB4P13762 266 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 SUMO2P61956 95 aaKnown RBP7.84□□□□□ -1.15
PABPC1-224ENST00000610907 RPL32P62910 135 aaKnown RBP7.84□□□□□ -1.15
PABPC1-224ENST00000610907 UBE2V1Q13404 147 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 TMEM95Q3KNT9 176 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 TMEM97Q5BJF2 176 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 HLA-DRB4X5D2U9 266 aa7.84□□□□□ -1.15
PABPC1-224ENST00000610907 IGHV4OR15-8A0A075B7B6 117 aa7.83□□□□□ -1.16
PABPC1-224ENST00000610907 A0A087WW49 117 aa7.83□□□□□ -1.16
PABPC1-224ENST00000610907 TRAV12-1A0A0B4J245 112 aa7.83□□□□□ -1.16
PABPC1-224ENST00000610907 RNF223E7ERA6 249 aa7.83□□□□□ -1.16
PABPC1-224ENST00000610907 K7EQG2 157 aa7.83□□□□□ -1.16
PABPC1-224ENST00000610907 GNRH2O43555 120 aa7.83□□□□□ -1.16
PABPC1-224ENST00000610907 DUSP14O95147 198 aaKnown RBP7.83□□□□□ -1.16
PABPC1-224ENST00000610907 HSD52Q0P140 79 aa7.83□□□□□ -1.16
PABPC1-224ENST00000610907 DEFB113Q30KQ7 82 aa7.83□□□□□ -1.16
PABPC1-224ENST00000610907 RASL10AQ92737 203 aa7.83□□□□□ -1.16
PABPC1-224ENST00000610907 HHLA3Q9XRX5 114 aa7.83□□□□□ -1.16
PABPC1-224ENST00000610907 FLNCQ14315 2725 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 A0A087WX48 190 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 A0A0J9YX75 114 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 C7orf71A4D174 169 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.82□□□□□ -1.16
PABPC1-224ENST00000610907 TAX1BP3O14907 124 aa7.82□□□□□ -1.16
PABPC1-224ENST00000610907 SRD5A1P18405 259 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms