RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 P01737 135 aa8.36□□□□□ -1.07
LINC00539-204ENST00000608957 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
LINC00539-204ENST00000608957 ACTL10Q5JWF8 245 aa8.36□□□□□ -1.07
LINC00539-204ENST00000608957 FAM162BQ5T6X4 162 aa8.36□□□□□ -1.07
LINC00539-204ENST00000608957 NUDT10Q8NFP7 164 aa8.36□□□□□ -1.07
LINC00539-204ENST00000608957 OR4B1Q8NGF8 309 aa8.36□□□□□ -1.07
LINC00539-204ENST00000608957 NUDT11Q96G61 164 aa8.36□□□□□ -1.07
LINC00539-204ENST00000608957 IMMP2LQ96T52 175 aa8.36□□□□□ -1.07
LINC00539-204ENST00000608957 RPP21Q9H633 154 aaKnown RBP8.36□□□□□ -1.07
LINC00539-204ENST00000608957 IL36BQ9NZH7 164 aa8.36□□□□□ -1.07
LINC00539-204ENST00000608957 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
LINC00539-204ENST00000608957 DEFB4AO15263 64 aa8.35□□□□□ -1.07
LINC00539-204ENST00000608957 CRISP2P16562 243 aa8.35□□□□□ -1.07
LINC00539-204ENST00000608957 S100PP25815 95 aa8.35□□□□□ -1.07
LINC00539-204ENST00000608957 CRIP1P50238 77 aa8.35□□□□□ -1.07
LINC00539-204ENST00000608957 ZNF80P51504 273 aaPredicted RBP8.35□□□□□ -1.07
LINC00539-204ENST00000608957 CT83Q5H943 113 aa8.35□□□□□ -1.07
LINC00539-204ENST00000608957 KCNIP4Q6PIL6 250 aa8.35□□□□□ -1.07
LINC00539-204ENST00000608957 ZFAND2AQ8N6M9 145 aa8.35□□□□□ -1.07
LINC00539-204ENST00000608957 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.35□□□□□ -1.07
LINC00539-204ENST00000608957 Q8NAQ8 132 aa8.35□□□□□ -1.07
LINC00539-204ENST00000608957 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
LINC00539-204ENST00000608957 YPEL4Q96NS1 127 aa8.35□□□□□ -1.07
LINC00539-204ENST00000608957 C11orf68Q9H3H3 251 aaKnown RBP8.35□□□□□ -1.07
LINC00539-204ENST00000608957 URGCP-MRPS24S4R325 110 aa8.35□□□□□ -1.07
LINC00539-204ENST00000608957 RBMY1A1P0DJD3 496 aaKnown RBP8.34□□□□□ -1.07
LINC00539-204ENST00000608957 RBMY1CP0DJD4 496 aa8.34□□□□□ -1.07
LINC00539-204ENST00000608957 LEPP41159 167 aa8.34□□□□□ -1.07
LINC00539-204ENST00000608957 NANOS2P60321 138 aaKnown RBP8.34□□□□□ -1.07
LINC00539-204ENST00000608957 ELOBQ15370 118 aa8.34□□□□□ -1.07
LINC00539-204ENST00000608957 RBMY1FQ15415 496 aaKnown RBP8.34□□□□□ -1.07
LINC00539-204ENST00000608957 PRR9Q5T870 116 aa8.34□□□□□ -1.07
LINC00539-204ENST00000608957 CEMP1Q6PRD7 247 aaPredicted RBP8.34□□□□□ -1.07
LINC00539-204ENST00000608957 X6R8D5 127 aa8.34□□□□□ -1.07
LINC00539-204ENST00000608957 A8MTW9 85 aa8.33□□□□□ -1.08
LINC00539-204ENST00000608957 H3BMM0 161 aa8.33□□□□□ -1.08
LINC00539-204ENST00000608957 IGKV3-20P01619 116 aa8.33□□□□□ -1.08
LINC00539-204ENST00000608957 PFN1P07737 140 aaKnown RBP8.33□□□□□ -1.08
LINC00539-204ENST00000608957 KMT2AQ03164 3969 aa8.33□□□□□ -1.08
LINC00539-204ENST00000608957 MORN3Q6PF18 240 aaPredicted RBP8.33□□□□□ -1.08
LINC00539-204ENST00000608957 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
LINC00539-204ENST00000608957 TRAV21A0A0B4J279 112 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 IGHV4-28A0A0C4DH34 117 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 A0A1W2PPQ1 181 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 NUPR2A6NF83 97 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 COLCA2A8K830 154 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 FABP5P3A8MUU1 101 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 KLLNB2CW77 178 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 J3KRW8 73 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 GPX1P07203 203 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 TSPOP30536 169 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 RPL19P84098 196 aaKnown RBP8.32□□□□□ -1.08
LINC00539-204ENST00000608957 AMTNQ6UX39 209 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 TSKUQ8WUA8 353 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 PHLDA1Q8WV24 401 aaPredicted RBP8.32□□□□□ -1.08
LINC00539-204ENST00000608957 LINC00476Q8WZB0 136 aa8.32□□□□□ -1.08
LINC00539-204ENST00000608957 TRBV24-1A0A075B6N3 115 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 TRAV9-1A0A075B6T8 112 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 TGIF2-C20orf24A0A0A6YYL0 155 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 SMIM27A0A1W2PRY6 76 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 TMEM189A5PLL7 270 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 A8MWL6 223 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 CXCL1P09341 107 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 CDKN1BP46527 198 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 TCL1AP56279 114 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 FAM3BP58499 235 aaPredicted RBP8.31□□□□□ -1.08
LINC00539-204ENST00000608957 RPS20P60866 119 aaKnown RBP8.31□□□□□ -1.08
LINC00539-204ENST00000608957 SPINK13Q1W4C9 94 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 LINC01559Q495D7 138 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 Q6AWC8 147 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 BTF3L4Q96K17 158 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 NEU1Q99519 415 aa8.31□□□□□ -1.08
LINC00539-204ENST00000608957 XKRY2A2RUG3 117 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 C7orf71A4D174 169 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 M0R2Z0 102 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 ORM1P02763 201 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 RNASE4P34096 147 aaKnown RBP8.3□□□□□ -1.08
LINC00539-204ENST00000608957 FXYD7P58549 80 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 KIR3DS1Q14943 382 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 GFI1BQ5VTD9 330 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 C11orf45Q8TAV5 145 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 FAM210BQ96KR6 192 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 CLUHP3Q96NS8 147 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 PYGO2Q9BRQ0 406 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 GFRA4Q9GZZ7 299 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 XCL2Q9UBD3 114 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 NAT8BQ9UHF3 227 aa8.3□□□□□ -1.08
LINC00539-204ENST00000608957 TMSB15BA0A087X1C1 80 aa8.29□□□□□ -1.08
LINC00539-204ENST00000608957 FAM231BA6NCW3 169 aa8.29□□□□□ -1.08
LINC00539-204ENST00000608957 HIGD1CA8MV81 97 aa8.29□□□□□ -1.08
LINC00539-204ENST00000608957 GZMBP10144 247 aa8.29□□□□□ -1.08
LINC00539-204ENST00000608957 NUP35Q8NFH5 326 aa8.29□□□□□ -1.08
LINC00539-204ENST00000608957 GTSF1Q8WW33 167 aa8.29□□□□□ -1.08
LINC00539-204ENST00000608957 C11orf21Q9P2W6 132 aa8.29□□□□□ -1.08
LINC00539-204ENST00000608957 NAGKQ9UJ70 344 aa8.29□□□□□ -1.08
LINC00539-204ENST00000608957 CELA1Q9UNI1 258 aa8.29□□□□□ -1.08
LINC00539-204ENST00000608957 TRAV12-2A0A075B6T6 113 aa8.28□□□□□ -1.08
LINC00539-204ENST00000608957 IGKV3D-20A0A0C4DH25 116 aa8.28□□□□□ -1.08
LINC00539-204ENST00000608957 MIFP14174 115 aa8.28□□□□□ -1.08
LINC00539-204ENST00000608957 RAB5AP20339 215 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms