RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 HSPB11Q9Y547 144 aa10.08□□□□□ -0.8
CTSA-216ENST00000607212 IGLV5-52A0A0A0MRZ9 124 aa10.07□□□□□ -0.8
CTSA-216ENST00000607212 TRBV7-9A0A0J9YWB2 115 aa10.07□□□□□ -0.8
CTSA-216ENST00000607212 RBAKDNA6NC62 111 aa10.07□□□□□ -0.8
CTSA-216ENST00000607212 G3V3Q6 166 aa10.07□□□□□ -0.8
CTSA-216ENST00000607212 K7EP13 123 aa10.07□□□□□ -0.8
CTSA-216ENST00000607212 SIX6O95475 246 aa10.07□□□□□ -0.8
CTSA-216ENST00000607212 HAMPP81172 84 aa10.07□□□□□ -0.8
CTSA-216ENST00000607212 WDR61Q9GZS3 305 aaKnown RBP10.07□□□□□ -0.8
CTSA-216ENST00000607212 TRAV4A0A0B4J268 109 aa10.06□□□□□ -0.8
CTSA-216ENST00000607212 IGHV3-16A0A0C4DH30 117 aa10.06□□□□□ -0.8
CTSA-216ENST00000607212 FAM229AH3BQW9 127 aa10.06□□□□□ -0.8
CTSA-216ENST00000607212 IL15RAQ13261 267 aa10.06□□□□□ -0.8
CTSA-216ENST00000607212 KHDC3LQ587J8 217 aa10.06□□□□□ -0.8
CTSA-216ENST00000607212 FFAR4Q5NUL3 377 aa10.06□□□□□ -0.8
CTSA-216ENST00000607212 OR5AC2Q9NZP5 309 aa10.06□□□□□ -0.8
CTSA-216ENST00000607212 LOC100131303A0A0U1RQF7 123 aa10.05□□□□□ -0.8
CTSA-216ENST00000607212 DIRC3C9JPN6 131 aa10.05□□□□□ -0.8
CTSA-216ENST00000607212 TAS2R45P59539 299 aa10.05□□□□□ -0.8
CTSA-216ENST00000607212 FAM74A1Q5RGS3 127 aa10.05□□□□□ -0.8
CTSA-216ENST00000607212 Q6AWC8 147 aa10.05□□□□□ -0.8
CTSA-216ENST00000607212 IQCF2Q8IXL9 164 aa10.05□□□□□ -0.8
CTSA-216ENST00000607212 SCGB1C1Q8TD33 95 aa10.05□□□□□ -0.8
CTSA-216ENST00000607212 RASL10AQ92737 203 aa10.05□□□□□ -0.8
CTSA-216ENST00000607212 NMES1Q9C002 83 aa10.05□□□□□ -0.8
CTSA-216ENST00000607212 Q9HAA7 133 aa10.05□□□□□ -0.8
CTSA-216ENST00000607212 M0R2P5 195 aa10.04□□□□□ -0.8
CTSA-216ENST00000607212 GNRH2O43555 120 aa10.04□□□□□ -0.8
CTSA-216ENST00000607212 GIPP09681 153 aaPredicted RBP10.04□□□□□ -0.8
CTSA-216ENST00000607212 LGALSLQ3ZCW2 172 aaPredicted RBP10.04□□□□□ -0.8
CTSA-216ENST00000607212 OR10J3Q5JRS4 329 aa10.04□□□□□ -0.8
CTSA-216ENST00000607212 SH2D6Q7Z4S9 175 aa10.04□□□□□ -0.8
CTSA-216ENST00000607212 ATP5SQ99766 215 aa10.04□□□□□ -0.8
CTSA-216ENST00000607212 SDF2L1Q9HCN8 221 aa10.04□□□□□ -0.8
CTSA-216ENST00000607212 TRAV8-6A0A0B4J262 113 aa10.03□□□□□ -0.8
CTSA-216ENST00000607212 IGHV3-38A0A0C4DH36 116 aa10.03□□□□□ -0.8
CTSA-216ENST00000607212 PGPA6NDG6 321 aa10.03□□□□□ -0.8
CTSA-216ENST00000607212 F6UZH7 168 aa10.03□□□□□ -0.8
CTSA-216ENST00000607212 SMIM3Q9BZL3 60 aa10.03□□□□□ -0.8
CTSA-216ENST00000607212 LENEPQ9Y5L5 61 aa10.03□□□□□ -0.8
CTSA-216ENST00000607212 TRAV21A0A0B4J279 112 aa10.02□□□□□ -0.81
CTSA-216ENST00000607212 EIF3GO75821 320 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTSA-216ENST00000607212 Q6ZSN1 163 aa10.02□□□□□ -0.81
CTSA-216ENST00000607212 GOLT1AQ6ZVE7 132 aa10.02□□□□□ -0.81
CTSA-216ENST00000607212 OR2T35Q8NGX2 323 aa10.02□□□□□ -0.81
CTSA-216ENST00000607212 OTORQ9NRC9 128 aa10.02□□□□□ -0.81
CTSA-216ENST00000607212 FBLL1A6NHQ2 334 aaKnown RBP10.01□□□□□ -0.81
CTSA-216ENST00000607212 IGHV3-30P01768 117 aa10.01□□□□□ -0.81
CTSA-216ENST00000607212 IGHV3-33P01772 117 aa10.01□□□□□ -0.81
CTSA-216ENST00000607212 TYMSP04818 313 aa10.01□□□□□ -0.81
CTSA-216ENST00000607212 IGHV3-30-3P0DP02 117 aa10.01□□□□□ -0.81
CTSA-216ENST00000607212 IGHV3-30-5P0DP03 117 aa10.01□□□□□ -0.81
CTSA-216ENST00000607212 CYCSP99999 105 aaKnown RBP10.01□□□□□ -0.81
CTSA-216ENST00000607212 PRADC1Q9BSG0 188 aa10.01□□□□□ -0.81
CTSA-216ENST00000607212 TREM1Q9NP99 234 aa10.01□□□□□ -0.81
CTSA-216ENST00000607212 MBD2Q9UBB5 411 aa10.01□□□□□ -0.81
CTSA-216ENST00000607212 IGHV3-73A0A0B4J1V6 119 aa10□□□□□ -0.81
CTSA-216ENST00000607212 A0A1W2PPV4 95 aa10□□□□□ -0.81
CTSA-216ENST00000607212 MPC2O95563 127 aa10□□□□□ -0.81
CTSA-216ENST00000607212 PFN1P07737 140 aaKnown RBP10□□□□□ -0.81
CTSA-216ENST00000607212 NTN5Q8WTR8 489 aaPredicted RBP10□□□□□ -0.81
CTSA-216ENST00000607212 ASB13Q8WXK3 278 aa10□□□□□ -0.81
CTSA-216ENST00000607212 KCNS1Q96KK3 526 aa10□□□□□ -0.81
CTSA-216ENST00000607212 NDFIP1Q9BT67 221 aa10□□□□□ -0.81
CTSA-216ENST00000607212 DMBT1Q9UGM3 2413 aaPredicted RBP9.99□□□□□ -0.81
CTSA-216ENST00000607212 H0YIZ8 118 aa9.99□□□□□ -0.81
CTSA-216ENST00000607212 J3QL48 77 aa9.99□□□□□ -0.81
CTSA-216ENST00000607212 PET100P0DJ07 73 aa9.99□□□□□ -0.81
CTSA-216ENST00000607212 GATA1P15976 413 aaPredicted RBP9.99□□□□□ -0.81
CTSA-216ENST00000607212 GNG5P63218 68 aa9.99□□□□□ -0.81
CTSA-216ENST00000607212 ACOT6Q3I5F7 207 aaPredicted RBP9.99□□□□□ -0.81
CTSA-216ENST00000607212 TEX261Q6UWH6 196 aa9.99□□□□□ -0.81
CTSA-216ENST00000607212 TMED6Q8WW62 240 aa9.99□□□□□ -0.81
CTSA-216ENST00000607212 TRAV8-1A0A0A6YYK1 113 aa9.98□□□□□ -0.81
CTSA-216ENST00000607212 RHOHQ15669 191 aa9.98□□□□□ -0.81
CTSA-216ENST00000607212 TDRG1Q3Y452 100 aa9.98□□□□□ -0.81
CTSA-216ENST00000607212 LINC01556Q5JQF7 62 aa9.98□□□□□ -0.81
CTSA-216ENST00000607212 Q8N814 137 aa9.98□□□□□ -0.81
CTSA-216ENST00000607212 PPP1R1CQ8WVI7 109 aa9.98□□□□□ -0.81
CTSA-216ENST00000607212 SGK494Q96LW2 274 aa9.98□□□□□ -0.81
CTSA-216ENST00000607212 TMEM70Q9BUB7 260 aa9.98□□□□□ -0.81
CTSA-216ENST00000607212 LINC00862A6NCI5 91 aa9.97□□□□□ -0.81
CTSA-216ENST00000607212 IBA57-AS1B1ANH7 110 aa9.97□□□□□ -0.81
CTSA-216ENST00000607212 HMGB3O15347 200 aaKnown RBP9.97□□□□□ -0.81
CTSA-216ENST00000607212 H2BFSP57053 126 aa9.97□□□□□ -0.81
CTSA-216ENST00000607212 TIRAPP58753 221 aa9.97□□□□□ -0.81
CTSA-216ENST00000607212 ZNF876PQ49A33 203 aa9.97□□□□□ -0.81
CTSA-216ENST00000607212 HERC1Q15751 4861 aa9.97□□□□□ -0.81
CTSA-216ENST00000607212 LRCOL1A6NCL2 159 aa9.96□□□□□ -0.82
CTSA-216ENST00000607212 RPL12P30050 165 aaKnown RBP9.96□□□□□ -0.82
CTSA-216ENST00000607212 PQLC2Q6ZP29 291 aa9.96□□□□□ -0.82
CTSA-216ENST00000607212 SLC25A29Q8N8R3 303 aa9.96□□□□□ -0.82
CTSA-216ENST00000607212 TM2D2Q9BX73 214 aa9.96□□□□□ -0.82
CTSA-216ENST00000607212 FLG2Q5D862 2391 aaPredicted RBP9.95□□□□□ -0.82
CTSA-216ENST00000607212 HMSDA8MTL9 139 aa9.95□□□□□ -0.82
CTSA-216ENST00000607212 K7EQM0 130 aa9.95□□□□□ -0.82
CTSA-216ENST00000607212 LELP1Q5T871 98 aa9.95□□□□□ -0.82
CTSA-216ENST00000607212 ATP6V0E2Q8NHE4 81 aa9.95□□□□□ -0.82
CTSA-216ENST00000607212 VPS13BQ7Z7G8 4022 aa9.95□□□□□ -0.82
CTSA-216ENST00000607212 RS1O15537 224 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms