RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 SDF2L1Q9HCN8 221 aa13.47□□□□□ -0.25
SRSF4-206ENST00000605204 NAGKQ9UJ70 344 aa13.47□□□□□ -0.25
SRSF4-206ENST00000605204 DNAH2Q9P225 4427 aa13.47□□□□□ -0.25
SRSF4-206ENST00000605204 PKHD1P08F94 4074 aa13.47□□□□□ -0.25
SRSF4-206ENST00000605204 PEX7O00628 323 aa13.46□□□□□ -0.25
SRSF4-206ENST00000605204 UBE2G2P60604 165 aa13.46□□□□□ -0.25
SRSF4-206ENST00000605204 SLAQ13239 276 aa13.46□□□□□ -0.25
SRSF4-206ENST00000605204 TMEM183BQ1AE95 376 aa13.46□□□□□ -0.25
SRSF4-206ENST00000605204 LGALSLQ3ZCW2 172 aaPredicted RBP13.46□□□□□ -0.25
SRSF4-206ENST00000605204 Q6ZQT7 251 aa13.46□□□□□ -0.25
SRSF4-206ENST00000605204 TMEM183AQ8IXX5 376 aa13.46□□□□□ -0.25
SRSF4-206ENST00000605204 FAM213BQ8TBF2 198 aa13.46□□□□□ -0.25
SRSF4-206ENST00000605204 MBD3L1Q8WWY6 194 aa13.46□□□□□ -0.25
SRSF4-206ENST00000605204 TRAV26-1A0A087WT03 109 aa13.45□□□□□ -0.26
SRSF4-206ENST00000605204 NUDT3O95989 172 aa13.45□□□□□ -0.26
SRSF4-206ENST00000605204 C1QBP02746 253 aa13.45□□□□□ -0.26
SRSF4-206ENST00000605204 PFN1P07737 140 aaKnown RBP13.45□□□□□ -0.26
SRSF4-206ENST00000605204 RAB5CP51148 216 aa13.45□□□□□ -0.26
SRSF4-206ENST00000605204 PRNTQ86SH4 94 aa13.45□□□□□ -0.26
SRSF4-206ENST00000605204 HOXA5P20719 270 aa13.45□□□□□ -0.26
SRSF4-206ENST00000605204 CCL18P55774 89 aa13.45□□□□□ -0.26
SRSF4-206ENST00000605204 SFT2D1Q8WV19 159 aa13.45□□□□□ -0.26
SRSF4-206ENST00000605204 RASL10AQ92737 203 aa13.45□□□□□ -0.26
SRSF4-206ENST00000605204 SGK494Q96LW2 274 aa13.45□□□□□ -0.26
SRSF4-206ENST00000605204 MDFICQ9P1T7 246 aa13.45□□□□□ -0.26
SRSF4-206ENST00000605204 DYNC1H1Q14204 4646 aaKnown RBP13.44□□□□□ -0.26
SRSF4-206ENST00000605204 RYR1P21817 5038 aa13.44□□□□□ -0.26
SRSF4-206ENST00000605204 GCGP01275 180 aa13.44□□□□□ -0.26
SRSF4-206ENST00000605204 AKAP14Q86UN6 197 aa13.44□□□□□ -0.26
SRSF4-206ENST00000605204 MRPL16Q9NX20 251 aaKnown RBP13.44□□□□□ -0.26
SRSF4-206ENST00000605204 IGHV3-16A0A0C4DH30 117 aa13.43□□□□□ -0.26
SRSF4-206ENST00000605204 H2AFB1P0C5Y9 115 aa13.43□□□□□ -0.26
SRSF4-206ENST00000605204 FMC1Q96HJ9 113 aa13.43□□□□□ -0.26
SRSF4-206ENST00000605204 ZFP30Q9Y2G7 519 aa13.43□□□□□ -0.26
SRSF4-206ENST00000605204 M0R2P5 195 aa13.42□□□□□ -0.26
SRSF4-206ENST00000605204 CST9LP1Q5W188 147 aa13.42□□□□□ -0.26
SRSF4-206ENST00000605204 Q86TA4 180 aa13.42□□□□□ -0.26
SRSF4-206ENST00000605204 DNAH17Q9UFH2 4485 aa13.41□□□□□ -0.26
SRSF4-206ENST00000605204 TRBV6-1A0A0K0K1D8 114 aa13.41□□□□□ -0.26
SRSF4-206ENST00000605204 TEX46H3BTG2 121 aa13.41□□□□□ -0.26
SRSF4-206ENST00000605204 TYMSP04818 313 aa13.41□□□□□ -0.26
SRSF4-206ENST00000605204 UBE2G1P62253 170 aa13.41□□□□□ -0.26
SRSF4-206ENST00000605204 C8orf49Q96NF6 230 aa13.41□□□□□ -0.26
SRSF4-206ENST00000605204 PRO0255Q9UI72 69 aa13.41□□□□□ -0.26
SRSF4-206ENST00000605204 S100A9P06702 114 aaKnown RBP13.4□□□□□ -0.26
SRSF4-206ENST00000605204 COX8CQ7Z4L0 72 aa13.4□□□□□ -0.26
SRSF4-206ENST00000605204 SLC51BQ86UW2 128 aa13.4□□□□□ -0.26
SRSF4-206ENST00000605204 LINC00479Q96M42 142 aa13.4□□□□□ -0.26
SRSF4-206ENST00000605204 TRAV1-1A0A0B4J248 108 aa13.39□□□□□ -0.27
SRSF4-206ENST00000605204 A0A0J9YY99 117 aa13.39□□□□□ -0.27
SRSF4-206ENST00000605204 ZNF80P51504 273 aaPredicted RBP13.39□□□□□ -0.27
SRSF4-206ENST00000605204 TRAV34A0A0B4J273 112 aa13.38□□□□□ -0.27
SRSF4-206ENST00000605204 FABP5P3A8MUU1 101 aa13.38□□□□□ -0.27
SRSF4-206ENST00000605204 GNRH2O43555 120 aa13.38□□□□□ -0.27
SRSF4-206ENST00000605204 PAGE4O60829 102 aa13.38□□□□□ -0.27
SRSF4-206ENST00000605204 LINC00336Q6ZUF6 198 aa13.38□□□□□ -0.27
SRSF4-206ENST00000605204 MANBALQ9NQG1 85 aa13.38□□□□□ -0.27
SRSF4-206ENST00000605204 TRAV4A0A0B4J268 109 aa13.37□□□□□ -0.27
SRSF4-206ENST00000605204 PAX4O43316 350 aa13.37□□□□□ -0.27
SRSF4-206ENST00000605204 CIDEAO60543 219 aa13.37□□□□□ -0.27
SRSF4-206ENST00000605204 AKR1C3P42330 323 aa13.37□□□□□ -0.27
SRSF4-206ENST00000605204 DNAH11Q96DT5 4516 aa13.37□□□□□ -0.27
SRSF4-206ENST00000605204 TRGV4A0A0C4DH28 118 aa13.36□□□□□ -0.27
SRSF4-206ENST00000605204 SULT1A2P50226 295 aa13.36□□□□□ -0.27
SRSF4-206ENST00000605204 PTH2Q96A98 100 aa13.36□□□□□ -0.27
SRSF4-206ENST00000605204 VSIG2Q96IQ7 327 aa13.36□□□□□ -0.27
SRSF4-206ENST00000605204 TXNDC17Q9BRA2 123 aa13.36□□□□□ -0.27
SRSF4-206ENST00000605204 HHLA3Q9XRX5 114 aa13.36□□□□□ -0.27
SRSF4-206ENST00000605204 ICOSQ9Y6W8 199 aa13.36□□□□□ -0.27
SRSF4-206ENST00000605204 LTAP01374 205 aa13.35□□□□□ -0.27
SRSF4-206ENST00000605204 IGHV3-53P01767 116 aa13.35□□□□□ -0.27
SRSF4-206ENST00000605204 CRYBA4P53673 196 aa13.35□□□□□ -0.27
SRSF4-206ENST00000605204 FHL2Q14192 279 aa13.35□□□□□ -0.27
SRSF4-206ENST00000605204 SOHLH1Q5JUK2 328 aa13.35□□□□□ -0.27
SRSF4-206ENST00000605204 ZNRF2Q8NHG8 242 aa13.35□□□□□ -0.27
SRSF4-206ENST00000605204 UPK3BQ9BT76 320 aa13.35□□□□□ -0.27
SRSF4-206ENST00000605204 C11orf21Q9P2W6 132 aa13.35□□□□□ -0.27
SRSF4-206ENST00000605204 LINC00588Q9Y4M8 146 aa13.35□□□□□ -0.27
SRSF4-206ENST00000605204 ZNF876PQ49A33 203 aa13.34□□□□□ -0.27
SRSF4-206ENST00000605204 PIK3CD-AS1Q5SR53 167 aa13.34□□□□□ -0.27
SRSF4-206ENST00000605204 FAM162BQ5T6X4 162 aa13.34□□□□□ -0.27
SRSF4-206ENST00000605204 Q6ZR54 194 aa13.34□□□□□ -0.27
SRSF4-206ENST00000605204 OR4C5Q8NGB2 326 aa13.34□□□□□ -0.27
SRSF4-206ENST00000605204 C9orf85Q96MD7 179 aa13.34□□□□□ -0.27
SRSF4-206ENST00000605204 hCG_2014768A0A024R1R8 64 aa13.33□□□□□ -0.27
SRSF4-206ENST00000605204 A0A096LPF7 62 aa13.33□□□□□ -0.27
SRSF4-206ENST00000605204 A0A1B0GV50 99 aa13.33□□□□□ -0.27
SRSF4-206ENST00000605204 ORM1P02763 201 aa13.33□□□□□ -0.27
SRSF4-206ENST00000605204 MRPL23Q16540 153 aaKnown RBP13.33□□□□□ -0.27
SRSF4-206ENST00000605204 PCNPQ8WW12 178 aaKnown RBP13.33□□□□□ -0.27
SRSF4-206ENST00000605204 ABCA13Q86UQ4 5058 aa13.33□□□□□ -0.28
SRSF4-206ENST00000605204 IGLV2-18A0A075B6J9 118 aa13.32□□□□□ -0.28
SRSF4-206ENST00000605204 S100A4P26447 101 aaKnown RBP13.32□□□□□ -0.28
SRSF4-206ENST00000605204 ASIPP42127 132 aa13.32□□□□□ -0.28
SRSF4-206ENST00000605204 ZNF479Q96JC4 524 aa13.32□□□□□ -0.28
SRSF4-206ENST00000605204 MRPS16Q9Y3D3 137 aaKnown RBP13.32□□□□□ -0.28
SRSF4-206ENST00000605204 IGKV3D-20A0A0C4DH25 116 aa13.32□□□□□ -0.28
SRSF4-206ENST00000605204 C9JCJ5 164 aa13.32□□□□□ -0.28
SRSF4-206ENST00000605204 IFNA1P01562 189 aa13.32□□□□□ -0.28
SRSF4-206ENST00000605204 TTC32Q5I0X7 151 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms