RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 FRYQ5TBA9 3013 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 TRAV8-4A0A0B4J246 113 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 CCDC179H3BU77 68 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 ATP1A1-AS1Q5TC04 95 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 C10orf126Q8N4M7 172 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 CCL17Q92583 94 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 TOMM6Q96B49 74 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 PLEKHB2Q96CS7 222 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 SLC50A1Q9BRV3 221 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 SPRY4Q9C004 299 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 HIF1ANQ9NWT6 349 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 VPS13AQ96RL7 3174 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 J3KRW8 73 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 M0QXV9 152 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 TNFRSF13BO14836 293 aaPredicted RBP4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 CD59P13987 128 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 HLA-DMBP28068 263 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 Q1RN00 199 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 TMEM155Q4W5P6 130 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 PAPPA-AS1Q5QFB9 102 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 IGFL4Q6B9Z1 124 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 Q6Q795 121 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 ZNF474Q6S9Z5 364 aaPredicted RBP4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 GFRALQ6UXV0 394 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 NEXN-AS1Q8NBZ9 246 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 BAALCQ8WXS3 180 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 CFHR4Q92496 578 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 TIMD4Q96H15 378 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 PRO1854Q9UHT4 67 aa4.96□□□□□ -1.62
SRGAP2-211ENST00000604423 AHCTF1Q8WYP5 2266 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 CEP290O15078 2479 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 CELSR3Q9NYQ7 3312 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 CENPVL3A0A0U1RRI6 287 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 LINC01548A6NM66 108 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 C17orf100A8MU93 164 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 TMEM178BH3BS89 294 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 CD7P09564 240 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 NHLRC4P0CG21 123 aaPredicted RBP4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 LOXP28300 417 aaPredicted RBP4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 ERCC8Q13216 396 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 ANXA2RQ3ZCQ2 193 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 LYPD2Q6UXB3 125 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 OR10J6PQ8NGY7 276 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 MALRD1Q5VYJ5 2156 aa4.95□□□□□ -1.62
SRGAP2-211ENST00000604423 CADP27708 2225 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 TRAV4A0A0B4J268 109 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 BUB1B-PAK6H3BSN5 160 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 COX7A1P24310 79 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 DLX6P56179 175 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 SUMO2P61956 95 aaKnown RBP4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 ATXN8Q156A1 80 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 C2orf66Q6UXQ4 117 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 DYNAPQ8N1N2 210 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 AJUBAQ96IF1 538 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 RNF5Q99942 180 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 C21orf62Q9NYP8 219 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 TRAV17A0A0B4J275 112 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 IGKV3D-20A0A0C4DH25 116 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 A0A0J9YY99 117 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 RBAKDNA6NC62 111 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 MBD3L4A6NDZ8 208 aaPredicted RBP4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 MBD3L3A6NE82 208 aaPredicted RBP4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 MBD3L5A6NJ08 208 aaPredicted RBP4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 H3BMM0 161 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 MGPP08493 103 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 CFC1BP0CG36 223 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 CFC1P0CG37 223 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 COX6B1P14854 86 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 FAM159AQ6UWV7 190 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 NUP37Q8NFH4 326 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 MBD3L2Q8NHZ7 208 aaPredicted RBP4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 NTN5Q8WTR8 489 aaPredicted RBP4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 UBE2WQ96B02 151 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 CTSZQ9UBR2 303 aa4.94□□□□□ -1.62
SRGAP2-211ENST00000604423 ICE1Q9Y2F5 2266 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 IGHV7-4-1A0A0J9YVY3 117 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 H7C2G1 150 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 NBR2O15453 112 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 IGHV3-23P01764 117 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 IGHV3-30P01768 117 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 IGHV3-30-5P0DP03 117 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 LGALS3P17931 250 aaKnown RBP4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 PRB3Q04118 309 aaPredicted RBP4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 MEIG1Q5JSS6 88 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 C15orf53Q8NAA6 179 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 KLHL30-AS1Q8NEE0 82 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 PRSS33Q8NF86 280 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 RASL10AQ92737 203 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 NBEAQ8NFP9 2946 aa4.93□□□□□ -1.62
SRGAP2-211ENST00000604423 TRAV2A0A0B4J234 112 aa4.92□□□□□ -1.62
SRGAP2-211ENST00000604423 M0R381 172 aa4.92□□□□□ -1.62
SRGAP2-211ENST00000604423 CRLF1O75462 422 aa4.92□□□□□ -1.62
SRGAP2-211ENST00000604423 HES1Q14469 280 aa4.92□□□□□ -1.62
SRGAP2-211ENST00000604423 LPAL2Q16609 132 aa4.92□□□□□ -1.62
SRGAP2-211ENST00000604423 ZNF672Q499Z4 452 aaPredicted RBP4.92□□□□□ -1.62
SRGAP2-211ENST00000604423 PRR30Q53SZ7 412 aaPredicted RBP4.92□□□□□ -1.62
SRGAP2-211ENST00000604423 TMEM170BQ5T4T1 132 aa4.92□□□□□ -1.62
SRGAP2-211ENST00000604423 TRPT1Q86TN4 253 aaKnown RBP4.92□□□□□ -1.62
SRGAP2-211ENST00000604423 RNF182Q8N6D2 247 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms