RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 GAGE12IP0CL82 117 aa11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 ZNF80P51504 273 aaPredicted RBP11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 MEF2BQ02080 365 aaPredicted RBP11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 FAM210BQ96KR6 192 aa11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 VAX2Q9UIW0 290 aa11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 STARD9Q9P2P6 4700 aa11.37□□□□□ -0.59
PPFIA3-213ENST00000602905 TRGV2A0A075B6R0 118 aa11.36□□□□□ -0.59
PPFIA3-213ENST00000602905 IGHV4-4A0A075B6R2 117 aa11.36□□□□□ -0.59
PPFIA3-213ENST00000602905 LTAP01374 205 aa11.36□□□□□ -0.59
PPFIA3-213ENST00000602905 BCL2P10415 239 aa11.36□□□□□ -0.59
PPFIA3-213ENST00000602905 LGALS9BQ3B8N2 356 aa11.36□□□□□ -0.59
PPFIA3-213ENST00000602905 SPXQ9BT56 116 aa11.36□□□□□ -0.59
PPFIA3-213ENST00000602905 NDUFAF3Q9BU61 184 aa11.36□□□□□ -0.59
PPFIA3-213ENST00000602905 F5H768 121 aa11.35□□□□□ -0.59
PPFIA3-213ENST00000602905 SPINK4O60575 86 aa11.35□□□□□ -0.59
PPFIA3-213ENST00000602905 Q6ZTI0 123 aa11.35□□□□□ -0.59
PPFIA3-213ENST00000602905 BAGE2Q86Y30 109 aa11.35□□□□□ -0.59
PPFIA3-213ENST00000602905 LINC00612Q8N6U2 182 aa11.35□□□□□ -0.59
PPFIA3-213ENST00000602905 MDFICQ9P1T7 246 aa11.35□□□□□ -0.59
PPFIA3-213ENST00000602905 LCE6AA0A183 80 aa11.34□□□□□ -0.59
PPFIA3-213ENST00000602905 GNRH2O43555 120 aa11.34□□□□□ -0.59
PPFIA3-213ENST00000602905 TYMSP04818 313 aa11.34□□□□□ -0.59
PPFIA3-213ENST00000602905 FAM162BQ5T6X4 162 aa11.34□□□□□ -0.59
PPFIA3-213ENST00000602905 COX8CQ7Z4L0 72 aa11.34□□□□□ -0.59
PPFIA3-213ENST00000602905 C11orf52Q96A22 123 aa11.34□□□□□ -0.59
PPFIA3-213ENST00000602905 ZC2HC1AQ96GY0 325 aa11.34□□□□□ -0.59
PPFIA3-213ENST00000602905 MED9Q9NWA0 146 aa11.34□□□□□ -0.59
PPFIA3-213ENST00000602905 IGHV3-16A0A0C4DH30 117 aa11.33□□□□□ -0.6
PPFIA3-213ENST00000602905 ORM1P02763 201 aa11.33□□□□□ -0.6
PPFIA3-213ENST00000602905 RPL35P42766 123 aaKnown RBP11.33□□□□□ -0.6
PPFIA3-213ENST00000602905 APLNQ9ULZ1 77 aa11.33□□□□□ -0.6
PPFIA3-213ENST00000602905 M0R2P5 195 aa11.32□□□□□ -0.6
PPFIA3-213ENST00000602905 S100A4P26447 101 aaKnown RBP11.32□□□□□ -0.6
PPFIA3-213ENST00000602905 TEX261Q6UWH6 196 aa11.32□□□□□ -0.6
PPFIA3-213ENST00000602905 NHLRC2Q8NBF2 726 aa11.32□□□□□ -0.6
PPFIA3-213ENST00000602905 LYPD6BQ8NI32 183 aa11.32□□□□□ -0.6
PPFIA3-213ENST00000602905 MRPL16Q9NX20 251 aaKnown RBP11.32□□□□□ -0.6
PPFIA3-213ENST00000602905 MUC4Q99102 2169 aa11.31□□□□□ -0.6
PPFIA3-213ENST00000602905 RBFOX3A6NFN3 312 aa11.31□□□□□ -0.6
PPFIA3-213ENST00000602905 B4DEV8 164 aa11.31□□□□□ -0.6
PPFIA3-213ENST00000602905 SH2D1AO60880 128 aa11.31□□□□□ -0.6
PPFIA3-213ENST00000602905 LY6G6CO95867 125 aa11.31□□□□□ -0.6
PPFIA3-213ENST00000602905 OR5I1Q13606 314 aa11.31□□□□□ -0.6
PPFIA3-213ENST00000602905 ZNF674Q2M3X9 581 aa11.31□□□□□ -0.6
PPFIA3-213ENST00000602905 TMEM88Q6PEY1 159 aa11.31□□□□□ -0.6
PPFIA3-213ENST00000602905 C15orf53Q8NAA6 179 aa11.31□□□□□ -0.6
PPFIA3-213ENST00000602905 C18orf15Q96N68 181 aa11.31□□□□□ -0.6
PPFIA3-213ENST00000602905 C11orf21Q9P2W6 132 aa11.31□□□□□ -0.6
PPFIA3-213ENST00000602905 ASIPP42127 132 aa11.3□□□□□ -0.6
PPFIA3-213ENST00000602905 LINC00476Q8WZB0 136 aa11.3□□□□□ -0.6
PPFIA3-213ENST00000602905 M0R036 132 aa11.29□□□□□ -0.6
PPFIA3-213ENST00000602905 GNG4P50150 75 aa11.29□□□□□ -0.6
PPFIA3-213ENST00000602905 CRIP1P50238 77 aa11.29□□□□□ -0.6
PPFIA3-213ENST00000602905 CENPWQ5EE01 88 aa11.29□□□□□ -0.6
PPFIA3-213ENST00000602905 LGALS9CQ6DKI2 356 aa11.29□□□□□ -0.6
PPFIA3-213ENST00000602905 RASL10AQ92737 203 aa11.29□□□□□ -0.6
PPFIA3-213ENST00000602905 DERL1Q9BUN8 251 aa11.29□□□□□ -0.6
PPFIA3-213ENST00000602905 EIF5A2Q9GZV4 153 aaKnown RBP11.29□□□□□ -0.6
PPFIA3-213ENST00000602905 NACAE9PAV3 2078 aa11.28□□□□□ -0.6
PPFIA3-213ENST00000602905 IGKV3D-20A0A0C4DH25 116 aa11.28□□□□□ -0.6
PPFIA3-213ENST00000602905 MGST1P10620 155 aaKnown RBP11.28□□□□□ -0.6
PPFIA3-213ENST00000602905 ZNF506Q5JVG8 444 aa11.28□□□□□ -0.6
PPFIA3-213ENST00000602905 PRR27Q6MZM9 219 aa11.28□□□□□ -0.6
PPFIA3-213ENST00000602905 DAZAP1Q96EP5 407 aaKnown RBP11.28□□□□□ -0.6
PPFIA3-213ENST00000602905 SMIM12Q96EX1 92 aa11.28□□□□□ -0.6
PPFIA3-213ENST00000602905 MLST8Q9BVC4 326 aa11.28□□□□□ -0.6
PPFIA3-213ENST00000602905 BIN3Q9NQY0 253 aa11.28□□□□□ -0.6
PPFIA3-213ENST00000602905 DYNC2H1Q8NCM8 4307 aaKnown RBP11.28□□□□□ -0.6
PPFIA3-213ENST00000602905 KRBOX1C9JBD0 128 aa11.27□□□□□ -0.61
PPFIA3-213ENST00000602905 TMEM250H0YL14 139 aa11.27□□□□□ -0.61
PPFIA3-213ENST00000602905 SLAQ13239 276 aa11.27□□□□□ -0.61
PPFIA3-213ENST00000602905 LINC01559Q495D7 138 aa11.27□□□□□ -0.61
PPFIA3-213ENST00000602905 TOR2AQ5JU69 321 aa11.27□□□□□ -0.61
PPFIA3-213ENST00000602905 TRGV4A0A0C4DH28 118 aa11.26□□□□□ -0.61
PPFIA3-213ENST00000602905 RAB19A4D1S5 217 aa11.26□□□□□ -0.61
PPFIA3-213ENST00000602905 C9JCJ5 164 aa11.26□□□□□ -0.61
PPFIA3-213ENST00000602905 NUDT3O95989 172 aa11.26□□□□□ -0.61
PPFIA3-213ENST00000602905 IGHV3-53P01767 116 aa11.26□□□□□ -0.61
PPFIA3-213ENST00000602905 P0DMU3 169 aa11.26□□□□□ -0.61
PPFIA3-213ENST00000602905 FAM231AP0DMU4 169 aa11.26□□□□□ -0.61
PPFIA3-213ENST00000602905 FAM231CP0DMU5 169 aa11.26□□□□□ -0.61
PPFIA3-213ENST00000602905 OR4C5Q8NGB2 326 aa11.26□□□□□ -0.61
PPFIA3-213ENST00000602905 C9orf85Q96MD7 179 aa11.26□□□□□ -0.61
PPFIA3-213ENST00000602905 FAM210AQ96ND0 272 aa11.26□□□□□ -0.61
PPFIA3-213ENST00000602905 TRAV26-1A0A087WT03 109 aa11.25□□□□□ -0.61
PPFIA3-213ENST00000602905 TMSB15BA0A087X1C1 80 aa11.25□□□□□ -0.61
PPFIA3-213ENST00000602905 TRAV4A0A0B4J268 109 aa11.25□□□□□ -0.61
PPFIA3-213ENST00000602905 GRIFINA4D1Z8 144 aa11.25□□□□□ -0.61
PPFIA3-213ENST00000602905 RNASE3P12724 160 aaKnown RBP11.25□□□□□ -0.61
PPFIA3-213ENST00000602905 HOXA5P20719 270 aa11.25□□□□□ -0.61
PPFIA3-213ENST00000602905 ZNF876PQ49A33 203 aa11.25□□□□□ -0.61
PPFIA3-213ENST00000602905 DNLZQ5SXM8 178 aa11.25□□□□□ -0.61
PPFIA3-213ENST00000602905 IL36BQ9NZH7 164 aa11.25□□□□□ -0.61
PPFIA3-213ENST00000602905 PLECQ15149 4684 aaKnown RBP11.24□□□□□ -0.61
PPFIA3-213ENST00000602905 A0A0J9YY99 117 aa11.24□□□□□ -0.61
PPFIA3-213ENST00000602905 H3BVH4 76 aa11.24□□□□□ -0.61
PPFIA3-213ENST00000602905 NDUFS6O75380 124 aaKnown RBP11.24□□□□□ -0.61
PPFIA3-213ENST00000602905 CEBPGP53567 150 aa11.24□□□□□ -0.61
PPFIA3-213ENST00000602905 UBE2DNLQ8IWF7 75 aa11.24□□□□□ -0.61
PPFIA3-213ENST00000602905 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms