RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 C20orf173Q96LM9 149 aa13.05□□□□□ -0.32
PPFIA3-207ENST00000602716 ASCL2Q99929 193 aa13.05□□□□□ -0.32
PPFIA3-207ENST00000602716 FOXA3P55318 350 aaPredicted RBP13.05□□□□□ -0.32
PPFIA3-207ENST00000602716 MAJINQ3KP22 176 aa13.05□□□□□ -0.32
PPFIA3-207ENST00000602716 TMEM75Q8N9X5 138 aa13.05□□□□□ -0.32
PPFIA3-207ENST00000602716 CITED1Q99966 193 aa13.05□□□□□ -0.32
PPFIA3-207ENST00000602716 LOC102724200A0A096LPH7 203 aaPredicted RBP13.04□□□□□ -0.32
PPFIA3-207ENST00000602716 PRAC2D3DTV9 90 aa13.04□□□□□ -0.32
PPFIA3-207ENST00000602716 DEFB1P60022 68 aa13.04□□□□□ -0.32
PPFIA3-207ENST00000602716 Q6ZN92 141 aa13.04□□□□□ -0.32
PPFIA3-207ENST00000602716 CHCHD1Q96BP2 118 aaKnown RBP13.04□□□□□ -0.32
PPFIA3-207ENST00000602716 TMEM208Q9BTX3 173 aa13.04□□□□□ -0.32
PPFIA3-207ENST00000602716 TRAV9-2A0A087WT02 112 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 IGKV2-40A0A087WW87 121 aaPredicted RBP13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 IGKV2D-40P01614 121 aaPredicted RBP13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 TFPI2P48307 235 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 COL5A1-AS1Q5SY13 56 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 LYPD1Q8N2G4 141 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 ZC2HC1AQ96GY0 325 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 NDFIP1Q9BT67 221 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 PEMTQ9UBM1 199 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 M0QZ24 198 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 OVOL1O14753 267 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 HNRNPA3P51991 378 aaKnown RBP13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 PSG9Q00887 426 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 SPATA12Q7Z6I5 190 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 AAMDCQ9H7C9 122 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 CLEC5AQ9NY25 188 aa13.03□□□□□ -0.32
PPFIA3-207ENST00000602716 C20orf202A1L168 122 aa13.02□□□□□ -0.33
PPFIA3-207ENST00000602716 DLEU1O43261 78 aa13.02□□□□□ -0.33
PPFIA3-207ENST00000602716 GAGE1Q13065 139 aa13.02□□□□□ -0.33
PPFIA3-207ENST00000602716 WFDC3Q8IUB2 231 aa13.02□□□□□ -0.33
PPFIA3-207ENST00000602716 SLC50A1Q9BRV3 221 aa13.02□□□□□ -0.33
PPFIA3-207ENST00000602716 ZFP30Q9Y2G7 519 aa13.02□□□□□ -0.33
PPFIA3-207ENST00000602716 IGHV1-24A0A0C4DH33 117 aa13.01□□□□□ -0.33
PPFIA3-207ENST00000602716 DCANP1Q8TF63 244 aa13.01□□□□□ -0.33
PPFIA3-207ENST00000602716 C16orf92Q96LL3 132 aa13.01□□□□□ -0.33
PPFIA3-207ENST00000602716 TMEM70Q9BUB7 260 aa13.01□□□□□ -0.33
PPFIA3-207ENST00000602716 MS4A6AQ9H2W1 248 aa13.01□□□□□ -0.33
PPFIA3-207ENST00000602716 CRXO43186 299 aaPredicted RBP13.01□□□□□ -0.33
PPFIA3-207ENST00000602716 TMEM61Q8N0U2 210 aa13.01□□□□□ -0.33
PPFIA3-207ENST00000602716 PSG8Q9UQ74 426 aa13.01□□□□□ -0.33
PPFIA3-207ENST00000602716 K7EQM0 130 aa13□□□□□ -0.33
PPFIA3-207ENST00000602716 PSG3Q16557 428 aa13□□□□□ -0.33
PPFIA3-207ENST00000602716 LAMTOR2Q9Y2Q5 125 aa13□□□□□ -0.33
PPFIA3-207ENST00000602716 TSPOP30536 169 aa13□□□□□ -0.33
PPFIA3-207ENST00000602716 BMI1P35226 326 aa13□□□□□ -0.33
PPFIA3-207ENST00000602716 A0A1B0GUT8 65 aa12.99□□□□□ -0.33
PPFIA3-207ENST00000602716 LINC00614P0C842 121 aa12.99□□□□□ -0.33
PPFIA3-207ENST00000602716 IGLL1P15814 213 aa12.99□□□□□ -0.33
PPFIA3-207ENST00000602716 STPG4Q8N801 248 aa12.99□□□□□ -0.33
PPFIA3-207ENST00000602716 LINC00482Q8N8I6 264 aa12.99□□□□□ -0.33
PPFIA3-207ENST00000602716 GATD1Q8NB37 220 aa12.99□□□□□ -0.33
PPFIA3-207ENST00000602716 DYNLRB2Q8TF09 96 aa12.99□□□□□ -0.33
PPFIA3-207ENST00000602716 VGLL1Q99990 258 aa12.99□□□□□ -0.33
PPFIA3-207ENST00000602716 MRPS16Q9Y3D3 137 aaKnown RBP12.99□□□□□ -0.33
PPFIA3-207ENST00000602716 PF4P02776 101 aa12.98□□□□□ -0.33
PPFIA3-207ENST00000602716 DEFB114Q30KQ6 69 aa12.98□□□□□ -0.33
PPFIA3-207ENST00000602716 CD300EQ496F6 205 aaPredicted RBP12.98□□□□□ -0.33
PPFIA3-207ENST00000602716 DMRTA1Q5VZB9 504 aa12.98□□□□□ -0.33
PPFIA3-207ENST00000602716 LINC00173Q6ZV60 143 aa12.98□□□□□ -0.33
PPFIA3-207ENST00000602716 Q8TAT8 98 aa12.98□□□□□ -0.33
PPFIA3-207ENST00000602716 ARMS2P0C7Q2 107 aa12.98□□□□□ -0.33
PPFIA3-207ENST00000602716 CRIP1P50238 77 aa12.98□□□□□ -0.33
PPFIA3-207ENST00000602716 ERCC8Q13216 396 aa12.98□□□□□ -0.33
PPFIA3-207ENST00000602716 GOLT1BQ9Y3E0 138 aa12.98□□□□□ -0.33
PPFIA3-207ENST00000602716 VWFP04275 2813 aa12.98□□□□□ -0.33
PPFIA3-207ENST00000602716 F6UB75 175 aa12.97□□□□□ -0.33
PPFIA3-207ENST00000602716 SYS1-DBNDD2H3BUS1 97 aa12.97□□□□□ -0.33
PPFIA3-207ENST00000602716 K7EQG2 157 aa12.97□□□□□ -0.33
PPFIA3-207ENST00000602716 LEPROTL1O95214 131 aa12.97□□□□□ -0.33
PPFIA3-207ENST00000602716 RIGQ13278 110 aa12.97□□□□□ -0.33
PPFIA3-207ENST00000602716 NPSP0C0P6 89 aa12.96□□□□□ -0.33
PPFIA3-207ENST00000602716 OR5AL1P0C617 328 aa12.96□□□□□ -0.33
PPFIA3-207ENST00000602716 ZNF688P0C7X2 276 aa12.96□□□□□ -0.33
PPFIA3-207ENST00000602716 A0A1B0GW15 77 aa12.96□□□□□ -0.34
PPFIA3-207ENST00000602716 OR4C46A6NHA9 309 aa12.96□□□□□ -0.34
PPFIA3-207ENST00000602716 SAP30O75446 220 aa12.96□□□□□ -0.34
PPFIA3-207ENST00000602716 CSN1S1P47710 185 aa12.96□□□□□ -0.34
PPFIA3-207ENST00000602716 ZNF738Q8NE65 137 aa12.96□□□□□ -0.34
PPFIA3-207ENST00000602716 Q6AWC8 147 aa12.95□□□□□ -0.34
PPFIA3-207ENST00000602716 ZNF138P52744 262 aa12.95□□□□□ -0.34
PPFIA3-207ENST00000602716 MRPL53Q96EL3 112 aaKnown RBP12.95□□□□□ -0.34
PPFIA3-207ENST00000602716 C8orf49Q96NF6 230 aa12.95□□□□□ -0.34
PPFIA3-207ENST00000602716 PSMG4Q5JS54 123 aa12.94□□□□□ -0.34
PPFIA3-207ENST00000602716 ST20Q9HBF5 79 aa12.93□□□□□ -0.34
PPFIA3-207ENST00000602716 SIGLEC8Q9NYZ4 499 aa12.93□□□□□ -0.34
PPFIA3-207ENST00000602716 SERTM2A0A1B0GWG4 89 aa12.93□□□□□ -0.34
PPFIA3-207ENST00000602716 CT45A10P0DMU9 189 aa12.93□□□□□ -0.34
PPFIA3-207ENST00000602716 TRRAPQ9Y4A5 3859 aa12.93□□□□□ -0.34
PPFIA3-207ENST00000602716 HINT1P49773 126 aaPredicted RBP12.92□□□□□ -0.34
PPFIA3-207ENST00000602716 PET117Q6UWS5 81 aa12.92□□□□□ -0.34
PPFIA3-207ENST00000602716 ZNF747Q9BV97 191 aa12.92□□□□□ -0.34
PPFIA3-207ENST00000602716 AGPAT4-IT1Q9H0P7 198 aa12.92□□□□□ -0.34
PPFIA3-207ENST00000602716 ZNF493Q6ZR52 646 aa12.91□□□□□ -0.34
PPFIA3-207ENST00000602716 COX8CQ7Z4L0 72 aa12.91□□□□□ -0.34
PPFIA3-207ENST00000602716 MAP1LC3CQ9BXW4 147 aa12.91□□□□□ -0.34
PPFIA3-207ENST00000602716 TMEM191AQ9H0A3 160 aa12.91□□□□□ -0.34
PPFIA3-207ENST00000602716 HSPB8Q9UJY1 196 aa12.91□□□□□ -0.34
PPFIA3-207ENST00000602716 ZNF256Q9Y2P7 627 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms