RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 ZNF688P0C7X2 276 aa12.06□□□□□ -0.48
PPFIA3-206ENST00000602655 PRCDQ00LT1 54 aa12.06□□□□□ -0.48
PPFIA3-206ENST00000602655 RNASE2P10153 161 aaKnown RBP12.05□□□□□ -0.48
PPFIA3-206ENST00000602655 IFITM1P13164 125 aa12.05□□□□□ -0.48
PPFIA3-206ENST00000602655 ZNF492Q9P255 531 aa12.05□□□□□ -0.48
PPFIA3-206ENST00000602655 H7C2G1 150 aa12.05□□□□□ -0.48
PPFIA3-206ENST00000602655 NDUFV3P56181 108 aaKnown RBP12.05□□□□□ -0.48
PPFIA3-206ENST00000602655 MAP1LC3AQ9H492 121 aa12.05□□□□□ -0.48
PPFIA3-206ENST00000602655 RBP4P02753 201 aa12.05□□□□□ -0.48
PPFIA3-206ENST00000602655 KLK15Q9H2R5 256 aa12.05□□□□□ -0.48
PPFIA3-206ENST00000602655 MRPL51Q4U2R6 128 aaKnown RBP12.04□□□□□ -0.48
PPFIA3-206ENST00000602655 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
PPFIA3-206ENST00000602655 SAA1P0DJI8 122 aaPredicted RBP12.04□□□□□ -0.48
PPFIA3-206ENST00000602655 Q86TA4 180 aa12.04□□□□□ -0.48
PPFIA3-206ENST00000602655 MRPL35Q9NZE8 188 aaKnown RBP12.04□□□□□ -0.48
PPFIA3-206ENST00000602655 IGHV3-35A0A0C4DH35 117 aa12.03□□□□□ -0.48
PPFIA3-206ENST00000602655 M0QXV9 152 aa12.03□□□□□ -0.48
PPFIA3-206ENST00000602655 IGHV1-8P0DP01 117 aa12.03□□□□□ -0.48
PPFIA3-206ENST00000602655 FAM104BQ5XKR9 115 aa12.03□□□□□ -0.48
PPFIA3-206ENST00000602655 E7EUB6 86 aa12.03□□□□□ -0.48
PPFIA3-206ENST00000602655 UPK2O00526 184 aa12.03□□□□□ -0.48
PPFIA3-206ENST00000602655 SMCPP49901 116 aaPredicted RBP12.03□□□□□ -0.48
PPFIA3-206ENST00000602655 CFAP126Q5VTH2 177 aa12.03□□□□□ -0.48
PPFIA3-206ENST00000602655 TEN1Q86WV5 123 aa12.03□□□□□ -0.48
PPFIA3-206ENST00000602655 ITPR3Q14573 2671 aa12.03□□□□□ -0.48
PPFIA3-206ENST00000602655 FLNAP21333 2647 aaKnown RBP12.02□□□□□ -0.48
PPFIA3-206ENST00000602655 C2orf83Q53S99 150 aa12.02□□□□□ -0.48
PPFIA3-206ENST00000602655 TEX36Q5VZQ5 186 aa12.02□□□□□ -0.48
PPFIA3-206ENST00000602655 MYOZ3Q8TDC0 251 aa12.02□□□□□ -0.48
PPFIA3-206ENST00000602655 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.48
PPFIA3-206ENST00000602655 TRAV4A0A0B4J268 109 aa12.02□□□□□ -0.49
PPFIA3-206ENST00000602655 HLA-DRB4P13762 266 aa12.02□□□□□ -0.49
PPFIA3-206ENST00000602655 SUB1P53999 127 aaKnown RBP eCLIP12.02□□□□□ -0.49
PPFIA3-206ENST00000602655 TMEM158Q8WZ71 300 aa12.02□□□□□ -0.49
PPFIA3-206ENST00000602655 AAMDCQ9H7C9 122 aa12.02□□□□□ -0.49
PPFIA3-206ENST00000602655 HLA-DRB4X5D2U9 266 aa12.02□□□□□ -0.49
PPFIA3-206ENST00000602655 IGHV3OR16-8A0A075B7F1 116 aa12.02□□□□□ -0.49
PPFIA3-206ENST00000602655 OR1L8Q8NGR8 309 aa12.02□□□□□ -0.49
PPFIA3-206ENST00000602655 KLF12Q9Y4X4 402 aa12.02□□□□□ -0.49
PPFIA3-206ENST00000602655 BRD3OSQ6XYD6 125 aa12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 PPP1R27Q86WC6 154 aa12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 CARD19Q96LW7 228 aa12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 HHLA3Q9XRX5 114 aa12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 TNFRSF18Q9Y5U5 241 aa12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 SORL1Q92673 2214 aa12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 GCN1Q92616 2671 aaKnown RBP12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 NF1P21359 2839 aa12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 J3KRW8 73 aa12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 FBN2P35556 2912 aa12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 ZFP36P26651 326 aaKnown RBP12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 RAB9BQ9NP90 201 aa12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 LINC00527Q9UJ94 153 aa12.01□□□□□ -0.49
PPFIA3-206ENST00000602655 NHLRC4P0CG21 123 aaPredicted RBP12□□□□□ -0.49
PPFIA3-206ENST00000602655 CGB3P0DN86 165 aa12□□□□□ -0.49
PPFIA3-206ENST00000602655 CGB7P0DN87 165 aa12□□□□□ -0.49
PPFIA3-206ENST00000602655 AJUBAQ96IF1 538 aa12□□□□□ -0.49
PPFIA3-206ENST00000602655 TMEM133Q9H2Q1 129 aa12□□□□□ -0.49
PPFIA3-206ENST00000602655 HIVEP2P31629 2446 aa12□□□□□ -0.49
PPFIA3-206ENST00000602655 ANKRD29Q8N6D5 301 aa11.99□□□□□ -0.49
PPFIA3-206ENST00000602655 LYRM7Q5U5X0 104 aa11.99□□□□□ -0.49
PPFIA3-206ENST00000602655 VCX2Q9H322 139 aa11.99□□□□□ -0.49
PPFIA3-206ENST00000602655 WI2-2373I1.2A0A1W2PRP0 233 aa11.99□□□□□ -0.49
PPFIA3-206ENST00000602655 CCL19Q99731 98 aa11.99□□□□□ -0.49
PPFIA3-206ENST00000602655 M0R3E3 92 aa11.98□□□□□ -0.49
PPFIA3-206ENST00000602655 ATP6V0E2Q8NHE4 81 aa11.98□□□□□ -0.49
PPFIA3-206ENST00000602655 C9JAW5 83 aa11.98□□□□□ -0.49
PPFIA3-206ENST00000602655 TIMM23O14925 209 aa11.98□□□□□ -0.49
PPFIA3-206ENST00000602655 IGHV3-23P01764 117 aa11.98□□□□□ -0.49
PPFIA3-206ENST00000602655 GATA1P15976 413 aaPredicted RBP11.98□□□□□ -0.49
PPFIA3-206ENST00000602655 ORM1P02763 201 aa11.98□□□□□ -0.49
PPFIA3-206ENST00000602655 TMEM155Q4W5P6 130 aa11.98□□□□□ -0.49
PPFIA3-206ENST00000602655 C8orf49Q96NF6 230 aa11.97□□□□□ -0.49
PPFIA3-206ENST00000602655 EMP1P54849 157 aa11.97□□□□□ -0.49
PPFIA3-206ENST00000602655 RAX2Q96IS3 184 aa11.97□□□□□ -0.49
PPFIA3-206ENST00000602655 FN1P02751 2386 aaKnown RBP11.97□□□□□ -0.49
PPFIA3-206ENST00000602655 CRLF1O75462 422 aa11.96□□□□□ -0.49
PPFIA3-206ENST00000602655 HIGD1AQ9Y241 93 aa11.96□□□□□ -0.49
PPFIA3-206ENST00000602655 ATP5LO75964 103 aa11.96□□□□□ -0.49
PPFIA3-206ENST00000602655 MRPL23Q16540 153 aaKnown RBP11.96□□□□□ -0.49
PPFIA3-206ENST00000602655 RUSC1-AS1Q66K80 236 aa11.96□□□□□ -0.49
PPFIA3-206ENST00000602655 MORN3Q6PF18 240 aaPredicted RBP11.96□□□□□ -0.49
PPFIA3-206ENST00000602655 Q6ZQT7 251 aa11.96□□□□□ -0.49
PPFIA3-206ENST00000602655 BEX4Q9NWD9 120 aaPredicted RBP11.96□□□□□ -0.49
PPFIA3-206ENST00000602655 MYMXA0A1B0GTQ4 84 aa11.96□□□□□ -0.5
PPFIA3-206ENST00000602655 RHODO00212 210 aa11.96□□□□□ -0.5
PPFIA3-206ENST00000602655 MYCNOSP40205 109 aa11.96□□□□□ -0.5
PPFIA3-206ENST00000602655 SRSF1Q07955 248 aaKnown RBP eCLIP11.96□□□□□ -0.5
PPFIA3-206ENST00000602655 LY6EQ16553 131 aa11.96□□□□□ -0.5
PPFIA3-206ENST00000602655 FBXL19-AS1Q494R0 122 aa11.96□□□□□ -0.5
PPFIA3-206ENST00000602655 TMEM219Q86XT9 240 aa11.96□□□□□ -0.5
PPFIA3-206ENST00000602655 C17orf77Q96MU5 243 aa11.96□□□□□ -0.5
PPFIA3-206ENST00000602655 MSRB1Q9NZV6 116 aa11.96□□□□□ -0.5
PPFIA3-206ENST00000602655 Q1RN00 199 aa11.95□□□□□ -0.5
PPFIA3-206ENST00000602655 PSMG4Q5JS54 123 aa11.95□□□□□ -0.5
PPFIA3-206ENST00000602655 RASL11BQ9BPW5 248 aa11.95□□□□□ -0.5
PPFIA3-206ENST00000602655 TENM4Q6N022 2769 aa11.95□□□□□ -0.5
PPFIA3-206ENST00000602655 NBPF19A0A087WUL8 3843 aa11.95□□□□□ -0.5
PPFIA3-206ENST00000602655 GAS8-AS1O95177 125 aa11.95□□□□□ -0.5
PPFIA3-206ENST00000602655 PF4V1P10720 104 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms