RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 PRR9Q5T870 116 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 SCGB1C1Q8TD33 95 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 TMED6Q8WW62 240 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 FXYD5Q96DB9 178 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 FAM167A-AS1Q96KT0 104 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 HYLS1Q96M11 299 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 PRADC1Q9BSG0 188 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 TM2D2Q9BX73 214 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 NMES1Q9C002 83 aa6.47□□□□□ -1.37
VRK3-224ENST00000601849 SRRM2Q9UQ35 2752 aaKnown RBP6.47□□□□□ -1.37
VRK3-224ENST00000601849 IBA57-AS1B1ANH7 110 aa6.46□□□□□ -1.38
VRK3-224ENST00000601849 DIRC3C9JPN6 131 aa6.46□□□□□ -1.38
VRK3-224ENST00000601849 PLA2G1BP04054 148 aaKnown RBP6.46□□□□□ -1.38
VRK3-224ENST00000601849 DEFA1P59665 94 aa6.46□□□□□ -1.38
VRK3-224ENST00000601849 DEFA3P59666 94 aa6.46□□□□□ -1.38
VRK3-224ENST00000601849 LINC01556Q5JQF7 62 aa6.46□□□□□ -1.38
VRK3-224ENST00000601849 Q6ZQT7 251 aa6.46□□□□□ -1.38
VRK3-224ENST00000601849 PHYHIPLQ96FC7 376 aa6.46□□□□□ -1.38
VRK3-224ENST00000601849 WDR61Q9GZS3 305 aaKnown RBP6.46□□□□□ -1.38
VRK3-224ENST00000601849 SDF2L1Q9HCN8 221 aa6.46□□□□□ -1.38
VRK3-224ENST00000601849 A0A1W2PPV4 95 aa6.45□□□□□ -1.38
VRK3-224ENST00000601849 PGPA6NDG6 321 aa6.45□□□□□ -1.38
VRK3-224ENST00000601849 FBLL1A6NHQ2 334 aaKnown RBP6.45□□□□□ -1.38
VRK3-224ENST00000601849 C1QBP02746 253 aa6.45□□□□□ -1.38
VRK3-224ENST00000601849 IL15RAQ13261 267 aa6.45□□□□□ -1.38
VRK3-224ENST00000601849 ARL6IP6Q8N6S5 226 aa6.45□□□□□ -1.38
VRK3-224ENST00000601849 Q8N814 137 aa6.45□□□□□ -1.38
VRK3-224ENST00000601849 ENKURQ8TC29 256 aa6.45□□□□□ -1.38
VRK3-224ENST00000601849 NDFIP1Q9BT67 221 aa6.45□□□□□ -1.38
VRK3-224ENST00000601849 Q9HAA7 133 aa6.45□□□□□ -1.38
VRK3-224ENST00000601849 TREM1Q9NP99 234 aa6.45□□□□□ -1.38
VRK3-224ENST00000601849 MBD2Q9UBB5 411 aa6.45□□□□□ -1.38
VRK3-224ENST00000601849 K7EQM0 130 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 GNRH2O43555 120 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 PET100P0DJ07 73 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 RHOHQ15669 191 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 ZNF876PQ49A33 203 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 LRRC37A5PQ49AS3 106 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 TOR2AQ5JU69 321 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 FFAR4Q5NUL3 377 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 ASB13Q8WXK3 278 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 MARVELD1Q9BSK0 173 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 OTORQ9NRC9 128 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 RPH3ALQ9UNE2 315 aa6.44□□□□□ -1.38
VRK3-224ENST00000601849 TRAV8-3A0A0A6YYJ7 113 aa6.43□□□□□ -1.38
VRK3-224ENST00000601849 IGHV3-16A0A0C4DH30 117 aa6.43□□□□□ -1.38
VRK3-224ENST00000601849 TRBV6-4A0A1B0GX49 114 aa6.43□□□□□ -1.38
VRK3-224ENST00000601849 LRCOL1A6NCL2 159 aa6.43□□□□□ -1.38
VRK3-224ENST00000601849 INMT-MINDY4F8WBC2 141 aa6.43□□□□□ -1.38
VRK3-224ENST00000601849 TAAR5O14804 337 aa6.43□□□□□ -1.38
VRK3-224ENST00000601849 LAGE3Q14657 143 aa6.43□□□□□ -1.38
VRK3-224ENST00000601849 LELP1Q5T871 98 aa6.43□□□□□ -1.38
VRK3-224ENST00000601849 PQLC2Q6ZP29 291 aa6.43□□□□□ -1.38
VRK3-224ENST00000601849 COX11Q9Y6N1 276 aa6.43□□□□□ -1.38
VRK3-224ENST00000601849 DNAH8Q96JB1 4490 aa6.43□□□□□ -1.38
VRK3-224ENST00000601849 LOC100131303A0A0U1RQF7 123 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 SERTM2A0A1B0GWG4 89 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 PTTG1O95997 202 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 IGHV3-30P01768 117 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 IGHV3-33P01772 117 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 TYMSP04818 313 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 IGHV3-30-3P0DP02 117 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 IGHV3-30-5P0DP03 117 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 MGST1P10620 155 aaKnown RBP6.42□□□□□ -1.38
VRK3-224ENST00000601849 GATA1P15976 413 aaPredicted RBP6.42□□□□□ -1.38
VRK3-224ENST00000601849 ACOT6Q3I5F7 207 aaPredicted RBP6.42□□□□□ -1.38
VRK3-224ENST00000601849 ZFP69Q49AA0 526 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 GOLT1AQ6ZVE7 132 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 SLC25A29Q8N8R3 303 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 ATP6V0E2Q8NHE4 81 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 DEFB104AQ8WTQ1 72 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 GTSF1LQ9H1H1 148 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 OR5AC2Q9NZP5 309 aa6.42□□□□□ -1.38
VRK3-224ENST00000601849 GGTLC3B5MD39 225 aa6.41□□□□□ -1.38
VRK3-224ENST00000601849 SIX6O95475 246 aa6.41□□□□□ -1.38
VRK3-224ENST00000601849 SEC11BP0C7V7 166 aa6.41□□□□□ -1.38
VRK3-224ENST00000601849 HAMPP81172 84 aa6.41□□□□□ -1.38
VRK3-224ENST00000601849 RMI2Q96E14 147 aa6.41□□□□□ -1.38
VRK3-224ENST00000601849 URGCP-MRPS24S4R325 110 aa6.41□□□□□ -1.38
VRK3-224ENST00000601849 A0A087WWC5 75 aa6.4□□□□□ -1.38
VRK3-224ENST00000601849 RS1O15537 224 aa6.4□□□□□ -1.38
VRK3-224ENST00000601849 RGS21Q2M5E4 152 aa6.4□□□□□ -1.38
VRK3-224ENST00000601849 CFAP126Q5VTH2 177 aa6.4□□□□□ -1.38
VRK3-224ENST00000601849 SYT8Q8NBV8 401 aa6.4□□□□□ -1.38
VRK3-224ENST00000601849 KRTAP3-3Q9BYR6 98 aa6.4□□□□□ -1.38
VRK3-224ENST00000601849 KRTAP3-2Q9BYR7 98 aa6.4□□□□□ -1.38
VRK3-224ENST00000601849 IGHV3-73A0A0B4J1V6 119 aa6.39□□□□□ -1.39
VRK3-224ENST00000601849 F6UZH7 168 aa6.39□□□□□ -1.39
VRK3-224ENST00000601849 S100A4P26447 101 aaKnown RBP6.39□□□□□ -1.39
VRK3-224ENST00000601849 RPL12P30050 165 aaKnown RBP6.39□□□□□ -1.39
VRK3-224ENST00000601849 FGF8P55075 233 aaPredicted RBP6.39□□□□□ -1.39
VRK3-224ENST00000601849 SMUG1Q53HV7 270 aa6.39□□□□□ -1.39
VRK3-224ENST00000601849 SAPCD1Q5SSQ6 148 aa6.39□□□□□ -1.39
VRK3-224ENST00000601849 SERTAD4-AS1Q5TG53 156 aa6.39□□□□□ -1.39
VRK3-224ENST00000601849 KCNIP4Q6PIL6 250 aa6.39□□□□□ -1.39
VRK3-224ENST00000601849 PPP1R1CQ8WVI7 109 aa6.39□□□□□ -1.39
VRK3-224ENST00000601849 PTH2Q96A98 100 aa6.39□□□□□ -1.39
VRK3-224ENST00000601849 HSPB11Q9Y547 144 aa6.39□□□□□ -1.39
VRK3-224ENST00000601849 RBFOX3A6NFN3 312 aa6.38□□□□□ -1.39
VRK3-224ENST00000601849 A8MWV9 139 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms