RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 RASL10AQ92737 203 aa12.14□□□□□ -0.47
IRF3-230ENST00000601809 PKHD1P08F94 4074 aa12.13□□□□□ -0.47
IRF3-230ENST00000601809 DNAH11Q96DT5 4516 aa12.13□□□□□ -0.47
IRF3-230ENST00000601809 FBLL1A6NHQ2 334 aaKnown RBP12.13□□□□□ -0.47
IRF3-230ENST00000601809 FHL2Q14192 279 aa12.13□□□□□ -0.47
IRF3-230ENST00000601809 IQCF2Q8IXL9 164 aa12.13□□□□□ -0.47
IRF3-230ENST00000601809 SPXQ9BT56 116 aa12.13□□□□□ -0.47
IRF3-230ENST00000601809 ZNF471Q9BX82 626 aaPredicted RBP12.13□□□□□ -0.47
IRF3-230ENST00000601809 TRAV34A0A0B4J273 112 aa12.12□□□□□ -0.47
IRF3-230ENST00000601809 KANTRA0A1W2PQU2 76 aa12.12□□□□□ -0.47
IRF3-230ENST00000601809 UMAD1C9J7I0 102 aa12.12□□□□□ -0.47
IRF3-230ENST00000601809 K7EQM0 130 aa12.12□□□□□ -0.47
IRF3-230ENST00000601809 PEX7O00628 323 aa12.12□□□□□ -0.47
IRF3-230ENST00000601809 RTL8CO15255 209 aa12.12□□□□□ -0.47
IRF3-230ENST00000601809 LGALSLQ3ZCW2 172 aaPredicted RBP12.12□□□□□ -0.47
IRF3-230ENST00000601809 COX8CQ7Z4L0 72 aa12.12□□□□□ -0.47
IRF3-230ENST00000601809 PRNTQ86SH4 94 aa12.12□□□□□ -0.47
IRF3-230ENST00000601809 STOML3Q8TAV4 291 aa12.12□□□□□ -0.47
IRF3-230ENST00000601809 NDFIP1Q9BT67 221 aa12.12□□□□□ -0.47
IRF3-230ENST00000601809 NKX6-2Q9C056 277 aaPredicted RBP12.12□□□□□ -0.47
IRF3-230ENST00000601809 ARL2-SNX15V9GYD0 113 aa12.12□□□□□ -0.47
IRF3-230ENST00000601809 DYNC1H1Q14204 4646 aaKnown RBP12.11□□□□□ -0.47
IRF3-230ENST00000601809 IGLV2-18A0A075B6J9 118 aa12.11□□□□□ -0.47
IRF3-230ENST00000601809 A0A096LPF7 62 aa12.11□□□□□ -0.47
IRF3-230ENST00000601809 M0R2N4 97 aa12.11□□□□□ -0.47
IRF3-230ENST00000601809 GCGP01275 180 aa12.11□□□□□ -0.47
IRF3-230ENST00000601809 PFN1P07737 140 aaKnown RBP12.11□□□□□ -0.47
IRF3-230ENST00000601809 Q86TA4 180 aa12.11□□□□□ -0.47
IRF3-230ENST00000601809 HIST1H2BAQ96A08 127 aa12.11□□□□□ -0.47
IRF3-230ENST00000601809 NAGKQ9UJ70 344 aa12.11□□□□□ -0.47
IRF3-230ENST00000601809 SMUG1Q53HV7 270 aa12.1□□□□□ -0.47
IRF3-230ENST00000601809 SAPCD1Q5SSQ6 148 aa12.1□□□□□ -0.47
IRF3-230ENST00000601809 KCNS1Q96KK3 526 aa12.1□□□□□ -0.47
IRF3-230ENST00000601809 SDF2L1Q9HCN8 221 aa12.1□□□□□ -0.47
IRF3-230ENST00000601809 IGHV3-53P01767 116 aa12.09□□□□□ -0.47
IRF3-230ENST00000601809 CRYBA4P53673 196 aa12.09□□□□□ -0.47
IRF3-230ENST00000601809 ESRGQ1W209 222 aa12.09□□□□□ -0.47
IRF3-230ENST00000601809 DPPA3Q6W0C5 159 aa12.09□□□□□ -0.47
IRF3-230ENST00000601809 ZNF575Q86XF7 245 aa12.09□□□□□ -0.47
IRF3-230ENST00000601809 FAM213BQ8TBF2 198 aa12.09□□□□□ -0.47
IRF3-230ENST00000601809 ZNF479Q96JC4 524 aa12.09□□□□□ -0.47
IRF3-230ENST00000601809 C9orf85Q96MD7 179 aa12.09□□□□□ -0.47
IRF3-230ENST00000601809 TRBV6-1A0A0K0K1D8 114 aa12.08□□□□□ -0.48
IRF3-230ENST00000601809 A0A1B0GVY2 172 aa12.08□□□□□ -0.48
IRF3-230ENST00000601809 M0R2P5 195 aa12.08□□□□□ -0.48
IRF3-230ENST00000601809 IFNA7P01567 189 aa12.08□□□□□ -0.48
IRF3-230ENST00000601809 C1QBP02746 253 aa12.08□□□□□ -0.48
IRF3-230ENST00000601809 SFTA3P0C7M3 94 aa12.08□□□□□ -0.48
IRF3-230ENST00000601809 TPT1P13693 172 aaKnown RBP12.08□□□□□ -0.48
IRF3-230ENST00000601809 CRIP1P50238 77 aa12.08□□□□□ -0.48
IRF3-230ENST00000601809 CCL18P55774 89 aa12.08□□□□□ -0.48
IRF3-230ENST00000601809 TCEAL7Q9BRU2 100 aa12.08□□□□□ -0.48
IRF3-230ENST00000601809 UPK3BQ9BT76 320 aa12.08□□□□□ -0.48
IRF3-230ENST00000601809 PRO0255Q9UI72 69 aa12.08□□□□□ -0.48
IRF3-230ENST00000601809 IGKV3D-20A0A0C4DH25 116 aa12.07□□□□□ -0.48
IRF3-230ENST00000601809 RNASE3P12724 160 aaKnown RBP12.07□□□□□ -0.48
IRF3-230ENST00000601809 EIF5AP63241 154 aaKnown RBP12.07□□□□□ -0.48
IRF3-230ENST00000601809 LINC00336Q6ZUF6 198 aa12.07□□□□□ -0.48
IRF3-230ENST00000601809 SFT2D1Q8WV19 159 aa12.07□□□□□ -0.48
IRF3-230ENST00000601809 TRAV4A0A0B4J268 109 aa12.06□□□□□ -0.48
IRF3-230ENST00000601809 PAGE4O60829 102 aa12.06□□□□□ -0.48
IRF3-230ENST00000601809 PPT1P50897 306 aa12.06□□□□□ -0.48
IRF3-230ENST00000601809 SLAQ13239 276 aa12.06□□□□□ -0.48
IRF3-230ENST00000601809 PTH2Q96A98 100 aa12.06□□□□□ -0.48
IRF3-230ENST00000601809 ZC2HC1AQ96GY0 325 aa12.06□□□□□ -0.48
IRF3-230ENST00000601809 HHLA3Q9XRX5 114 aa12.06□□□□□ -0.48
IRF3-230ENST00000601809 MRPS16Q9Y3D3 137 aaKnown RBP12.06□□□□□ -0.48
IRF3-230ENST00000601809 NBDYA0A0U1RRE5 68 aa12.05□□□□□ -0.48
IRF3-230ENST00000601809 PAX4O43316 350 aa12.05□□□□□ -0.48
IRF3-230ENST00000601809 PFDN1O60925 122 aa12.05□□□□□ -0.48
IRF3-230ENST00000601809 ZFP69Q49AA0 526 aa12.05□□□□□ -0.48
IRF3-230ENST00000601809 FMC1Q96HJ9 113 aa12.05□□□□□ -0.48
IRF3-230ENST00000601809 ZFP30Q9Y2G7 519 aa12.05□□□□□ -0.48
IRF3-230ENST00000601809 TRAV1-1A0A0B4J248 108 aa12.04□□□□□ -0.48
IRF3-230ENST00000601809 LTAP01374 205 aa12.04□□□□□ -0.48
IRF3-230ENST00000601809 H2AFB1P0C5Y9 115 aa12.04□□□□□ -0.48
IRF3-230ENST00000601809 KRTAP1-5Q9BYS1 174 aa12.04□□□□□ -0.48
IRF3-230ENST00000601809 FABP5P3A8MUU1 101 aa12.03□□□□□ -0.48
IRF3-230ENST00000601809 CCL20P78556 96 aa12.03□□□□□ -0.48
IRF3-230ENST00000601809 DNLZQ5SXM8 178 aa12.03□□□□□ -0.48
IRF3-230ENST00000601809 CST9LP1Q5W188 147 aa12.03□□□□□ -0.48
IRF3-230ENST00000601809 Q9H8V8 135 aa12.03□□□□□ -0.48
IRF3-230ENST00000601809 ICOSQ9Y6W8 199 aa12.03□□□□□ -0.48
IRF3-230ENST00000601809 A0A1B0GV50 99 aa12.02□□□□□ -0.49
IRF3-230ENST00000601809 PGPEP1LA6NFU8 196 aa12.02□□□□□ -0.49
IRF3-230ENST00000601809 RS1O15537 224 aa12.02□□□□□ -0.49
IRF3-230ENST00000601809 GATA1P15976 413 aaPredicted RBP12.02□□□□□ -0.49
IRF3-230ENST00000601809 SULT1A2P50226 295 aa12.02□□□□□ -0.49
IRF3-230ENST00000601809 ZNF674Q2M3X9 581 aa12.02□□□□□ -0.49
IRF3-230ENST00000601809 HERC2O95714 4834 aa12.01□□□□□ -0.49
IRF3-230ENST00000601809 TRGV4A0A0C4DH28 118 aa12.01□□□□□ -0.49
IRF3-230ENST00000601809 SCO2A0A1W2PP80 73 aa12.01□□□□□ -0.49
IRF3-230ENST00000601809 KRBOX1C9JBD0 128 aa12.01□□□□□ -0.49
IRF3-230ENST00000601809 RAB5CP51148 216 aa12.01□□□□□ -0.49
IRF3-230ENST00000601809 ZNF876PQ49A33 203 aa12.01□□□□□ -0.49
IRF3-230ENST00000601809 ZNF506Q5JVG8 444 aa12.01□□□□□ -0.49
IRF3-230ENST00000601809 CFAP126Q5VTH2 177 aa12.01□□□□□ -0.49
IRF3-230ENST00000601809 C9orf62Q8N4C0 152 aa12.01□□□□□ -0.49
IRF3-230ENST00000601809 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
IRF3-230ENST00000601809 MLST8Q9BVC4 326 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms