RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 MDFICQ9P1T7 246 aa9.03□□□□□ -0.96
USE1-209ENST00000601592 ARL2-SNX15V9GYD0 113 aa9.03□□□□□ -0.96
USE1-209ENST00000601592 MUC4Q99102 2169 aa9.03□□□□□ -0.96
USE1-209ENST00000601592 NACAE9PAV3 2078 aa9.03□□□□□ -0.96
USE1-209ENST00000601592 TEX46H3BTG2 121 aa9.02□□□□□ -0.97
USE1-209ENST00000601592 NUDT3O95989 172 aa9.02□□□□□ -0.97
USE1-209ENST00000601592 ZNF80P51504 273 aaPredicted RBP9.02□□□□□ -0.97
USE1-209ENST00000601592 SDF2L1Q9HCN8 221 aa9.02□□□□□ -0.97
USE1-209ENST00000601592 GNG13Q9P2W3 67 aa9.02□□□□□ -0.97
USE1-209ENST00000601592 GNRH2O43555 120 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 SPINK4O60575 86 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 TYMSP04818 313 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 P0DMU3 169 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 FAM231AP0DMU4 169 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 FAM231CP0DMU5 169 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 SULT1A2P50226 295 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 NKX2-5P52952 324 aaPredicted RBP9.01□□□□□ -0.97
USE1-209ENST00000601592 C15orf53Q8NAA6 179 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 FMC1Q96HJ9 113 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 KCNS1Q96KK3 526 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 TCEAL7Q9BRU2 100 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 RYR2Q92736 4967 aa9.01□□□□□ -0.97
USE1-209ENST00000601592 TRAV26-1A0A087WT03 109 aa9□□□□□ -0.97
USE1-209ENST00000601592 A0A0J9YY99 117 aa9□□□□□ -0.97
USE1-209ENST00000601592 SCO2A0A1W2PP80 73 aa9□□□□□ -0.97
USE1-209ENST00000601592 PFN1P07737 140 aaKnown RBP9□□□□□ -0.97
USE1-209ENST00000601592 TDRG1Q3Y452 100 aa9□□□□□ -0.97
USE1-209ENST00000601592 MANBALQ9NQG1 85 aa9□□□□□ -0.97
USE1-209ENST00000601592 IGHV3-16A0A0C4DH30 117 aa8.99□□□□□ -0.97
USE1-209ENST00000601592 HOXA5P20719 270 aa8.99□□□□□ -0.97
USE1-209ENST00000601592 CCL20P78556 96 aa8.99□□□□□ -0.97
USE1-209ENST00000601592 LGALS9BQ3B8N2 356 aa8.99□□□□□ -0.97
USE1-209ENST00000601592 SPXQ9BT56 116 aa8.99□□□□□ -0.97
USE1-209ENST00000601592 C11orf21Q9P2W6 132 aa8.99□□□□□ -0.97
USE1-209ENST00000601592 HYDINQ4G0P3 5121 aa8.99□□□□□ -0.97
USE1-209ENST00000601592 ALKAL2Q6UX46 152 aa8.98□□□□□ -0.97
USE1-209ENST00000601592 POM121L12Q8N7R1 296 aa8.98□□□□□ -0.97
USE1-209ENST00000601592 NHLRC2Q8NBF2 726 aa8.98□□□□□ -0.97
USE1-209ENST00000601592 ZC2HC1AQ96GY0 325 aa8.98□□□□□ -0.97
USE1-209ENST00000601592 ZFP30Q9Y2G7 519 aa8.98□□□□□ -0.97
USE1-209ENST00000601592 VPS13DQ5THJ4 4388 aa8.97□□□□□ -0.97
USE1-209ENST00000601592 TRAV1-1A0A0B4J248 108 aa8.97□□□□□ -0.97
USE1-209ENST00000601592 FABP5P3A8MUU1 101 aa8.97□□□□□ -0.97
USE1-209ENST00000601592 M0R036 132 aa8.97□□□□□ -0.97
USE1-209ENST00000601592 M0R2P5 195 aa8.97□□□□□ -0.97
USE1-209ENST00000601592 IFNA1P01562 189 aa8.97□□□□□ -0.97
USE1-209ENST00000601592 ORM1P02763 201 aa8.97□□□□□ -0.97
USE1-209ENST00000601592 BOLA1Q9Y3E2 137 aa8.97□□□□□ -0.97
USE1-209ENST00000601592 TRGV4A0A0C4DH28 118 aa8.96□□□□□ -0.98
USE1-209ENST00000601592 C9JCJ5 164 aa8.96□□□□□ -0.98
USE1-209ENST00000601592 SH2D1AO60880 128 aa8.96□□□□□ -0.98
USE1-209ENST00000601592 LTAP01374 205 aa8.96□□□□□ -0.98
USE1-209ENST00000601592 SFTA3P0C7M3 94 aa8.96□□□□□ -0.98
USE1-209ENST00000601592 S100A4P26447 101 aaKnown RBP8.96□□□□□ -0.98
USE1-209ENST00000601592 C18orf15Q96N68 181 aa8.96□□□□□ -0.98
USE1-209ENST00000601592 TRBV6-1A0A0K0K1D8 114 aa8.95□□□□□ -0.98
USE1-209ENST00000601592 B4DEV8 164 aa8.95□□□□□ -0.98
USE1-209ENST00000601592 S100A9P06702 114 aaKnown RBP8.95□□□□□ -0.98
USE1-209ENST00000601592 FAM162BQ5T6X4 162 aa8.95□□□□□ -0.98
USE1-209ENST00000601592 IGLV2-18A0A075B6J9 118 aa8.94□□□□□ -0.98
USE1-209ENST00000601592 TMSB15BA0A087X1C1 80 aa8.94□□□□□ -0.98
USE1-209ENST00000601592 IGKV3D-20A0A0C4DH25 116 aa8.94□□□□□ -0.98
USE1-209ENST00000601592 PAX4O43316 350 aa8.94□□□□□ -0.98
USE1-209ENST00000601592 ASIPP42127 132 aa8.94□□□□□ -0.98
USE1-209ENST00000601592 CRIP1P50238 77 aa8.94□□□□□ -0.98
USE1-209ENST00000601592 BAGE2Q86Y30 109 aa8.94□□□□□ -0.98
USE1-209ENST00000601592 OR4C5Q8NGB2 326 aa8.94□□□□□ -0.98
USE1-209ENST00000601592 RASL10AQ92737 203 aa8.94□□□□□ -0.98
USE1-209ENST00000601592 ZNF479Q96JC4 524 aa8.94□□□□□ -0.98
USE1-209ENST00000601592 TRAV4A0A0B4J268 109 aa8.93□□□□□ -0.98
USE1-209ENST00000601592 H3BVH4 76 aa8.93□□□□□ -0.98
USE1-209ENST00000601592 M0R2N4 97 aa8.93□□□□□ -0.98
USE1-209ENST00000601592 BCL2P10415 239 aa8.93□□□□□ -0.98
USE1-209ENST00000601592 RPL35P42766 123 aaKnown RBP8.93□□□□□ -0.98
USE1-209ENST00000601592 CCL18P55774 89 aa8.93□□□□□ -0.98
USE1-209ENST00000601592 MEF2BQ02080 365 aaPredicted RBP8.93□□□□□ -0.98
USE1-209ENST00000601592 RNF212Q495C1 297 aa8.93□□□□□ -0.98
USE1-209ENST00000601592 ZNF876PQ49A33 203 aa8.93□□□□□ -0.98
USE1-209ENST00000601592 PRR27Q6MZM9 219 aa8.93□□□□□ -0.98
USE1-209ENST00000601592 DERL1Q9BUN8 251 aa8.93□□□□□ -0.98
USE1-209ENST00000601592 PRO0255Q9UI72 69 aa8.93□□□□□ -0.98
USE1-209ENST00000601592 HHLA3Q9XRX5 114 aa8.93□□□□□ -0.98
USE1-209ENST00000601592 GRIFINA4D1Z8 144 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 KRBOX1C9JBD0 128 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 RNASE3P12724 160 aaKnown RBP8.92□□□□□ -0.98
USE1-209ENST00000601592 BLOC1S1P78537 153 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 FHL2Q14192 279 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 ZNF674Q2M3X9 581 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 C11orf52Q96A22 123 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 VSIG2Q96IQ7 327 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 C9orf85Q96MD7 179 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 TXNDC17Q9BRA2 123 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 VAX2Q9UIW0 290 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 ICOSQ9Y6W8 199 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 KMT2AQ03164 3969 aa8.92□□□□□ -0.98
USE1-209ENST00000601592 H3BNG1 76 aa8.91□□□□□ -0.98
USE1-209ENST00000601592 PDE6DO43924 150 aa8.91□□□□□ -0.98
USE1-209ENST00000601592 MGST1P10620 155 aaKnown RBP8.91□□□□□ -0.98
USE1-209ENST00000601592 CRYBA4P53673 196 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms