RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 GNB1LQ9BYB4 327 aa9.48□□□□□ -0.89
ZNF548-210ENST00000600442 NAGKQ9UJ70 344 aa9.48□□□□□ -0.89
ZNF548-210ENST00000600442 TMA7Q9Y2S6 64 aaKnown RBP9.48□□□□□ -0.89
ZNF548-210ENST00000600442 TMSB15BA0A087X1C1 80 aa9.47□□□□□ -0.89
ZNF548-210ENST00000600442 A0A1B0GUT8 65 aa9.47□□□□□ -0.89
ZNF548-210ENST00000600442 KNCNA6PVL3 124 aa9.47□□□□□ -0.89
ZNF548-210ENST00000600442 J3KRW8 73 aa9.47□□□□□ -0.89
ZNF548-210ENST00000600442 ZNF80P51504 273 aaPredicted RBP9.47□□□□□ -0.89
ZNF548-210ENST00000600442 RAB4BP61018 213 aa9.47□□□□□ -0.89
ZNF548-210ENST00000600442 HBBP68871 147 aa9.47□□□□□ -0.89
ZNF548-210ENST00000600442 SMIM15Q7Z3B0 74 aa9.47□□□□□ -0.89
ZNF548-210ENST00000600442 FER1L6-AS1Q8NA97 138 aa9.47□□□□□ -0.89
ZNF548-210ENST00000600442 FRZBQ92765 325 aa9.47□□□□□ -0.89
ZNF548-210ENST00000600442 C20orf144Q9BQM9 153 aa9.47□□□□□ -0.89
ZNF548-210ENST00000600442 TRAPPC1Q9Y5R8 145 aa9.47□□□□□ -0.89
ZNF548-210ENST00000600442 HLA-DQA1P01909 254 aa9.46□□□□□ -0.9
ZNF548-210ENST00000600442 ASIPP42127 132 aa9.46□□□□□ -0.9
ZNF548-210ENST00000600442 DEFB1P60022 68 aa9.46□□□□□ -0.9
ZNF548-210ENST00000600442 GDF5OSQ5U4N7 250 aa9.46□□□□□ -0.9
ZNF548-210ENST00000600442 C1QTNF4Q9BXJ3 329 aa9.46□□□□□ -0.9
ZNF548-210ENST00000600442 A8MTW9 85 aa9.45□□□□□ -0.9
ZNF548-210ENST00000600442 SPINK4O60575 86 aa9.45□□□□□ -0.9
ZNF548-210ENST00000600442 INSP01308 110 aa9.45□□□□□ -0.9
ZNF548-210ENST00000600442 S100A6P06703 90 aa9.45□□□□□ -0.9
ZNF548-210ENST00000600442 CACNG7P62955 275 aa9.45□□□□□ -0.9
ZNF548-210ENST00000600442 SPINK13Q1W4C9 94 aa9.45□□□□□ -0.9
ZNF548-210ENST00000600442 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
ZNF548-210ENST00000600442 MRPL54Q6P161 138 aaKnown RBP9.45□□□□□ -0.9
ZNF548-210ENST00000600442 MORN3Q6PF18 240 aaPredicted RBP9.45□□□□□ -0.9
ZNF548-210ENST00000600442 TRGV11A0A075B6L2 103 aa9.44□□□□□ -0.9
ZNF548-210ENST00000600442 TRAV12-3A0A0B4J271 114 aa9.44□□□□□ -0.9
ZNF548-210ENST00000600442 MED14OSP0DP75 135 aa9.44□□□□□ -0.9
ZNF548-210ENST00000600442 TMEM256Q8N2U0 113 aa9.44□□□□□ -0.9
ZNF548-210ENST00000600442 GTSF1Q8WW33 167 aa9.44□□□□□ -0.9
ZNF548-210ENST00000600442 NOTCH3Q9UM47 2321 aa9.44□□□□□ -0.9
ZNF548-210ENST00000600442 SNURFLB1AK76 121 aa9.43□□□□□ -0.9
ZNF548-210ENST00000600442 M0R2Z0 102 aa9.43□□□□□ -0.9
ZNF548-210ENST00000600442 APCSP02743 223 aa9.43□□□□□ -0.9
ZNF548-210ENST00000600442 GZMBP10144 247 aa9.43□□□□□ -0.9
ZNF548-210ENST00000600442 CTRLP40313 264 aa9.43□□□□□ -0.9
ZNF548-210ENST00000600442 CAMPP49913 170 aa9.43□□□□□ -0.9
ZNF548-210ENST00000600442 FABP9Q0Z7S8 132 aa9.43□□□□□ -0.9
ZNF548-210ENST00000600442 GFI1BQ5VTD9 330 aa9.43□□□□□ -0.9
ZNF548-210ENST00000600442 LYZL1Q6UWQ5 148 aa9.43□□□□□ -0.9
ZNF548-210ENST00000600442 TMEM208Q9BTX3 173 aa9.43□□□□□ -0.9
ZNF548-210ENST00000600442 IGHV1OR15-1A0A075B7D0 117 aa9.42□□□□□ -0.9
ZNF548-210ENST00000600442 IGKV3D-20A0A0C4DH25 116 aa9.42□□□□□ -0.9
ZNF548-210ENST00000600442 GRIFINA4D1Z8 144 aa9.42□□□□□ -0.9
ZNF548-210ENST00000600442 TRGC2P03986 189 aa9.42□□□□□ -0.9
ZNF548-210ENST00000600442 OR5AL1P0C617 328 aa9.42□□□□□ -0.9
ZNF548-210ENST00000600442 TWIST1Q15672 202 aa9.42□□□□□ -0.9
ZNF548-210ENST00000600442 TDRG1Q3Y452 100 aa9.42□□□□□ -0.9
ZNF548-210ENST00000600442 ANXA2RQ3ZCQ2 193 aa9.42□□□□□ -0.9
ZNF548-210ENST00000600442 SPANXN1Q5VSR9 72 aa9.42□□□□□ -0.9
ZNF548-210ENST00000600442 AMTNQ6UX39 209 aa9.42□□□□□ -0.9
ZNF548-210ENST00000600442 TRPT1Q86TN4 253 aaKnown RBP9.42□□□□□ -0.9
ZNF548-210ENST00000600442 PHLDA3Q9Y5J5 127 aa9.42□□□□□ -0.9
ZNF548-210ENST00000600442 TRAV12-2A0A075B6T6 113 aa9.41□□□□□ -0.9
ZNF548-210ENST00000600442 CD7P09564 240 aa9.41□□□□□ -0.9
ZNF548-210ENST00000600442 IGLC6P0CF74 106 aa9.41□□□□□ -0.9
ZNF548-210ENST00000600442 MUC21Q5SSG8 566 aa9.41□□□□□ -0.9
ZNF548-210ENST00000600442 DNLZQ5SXM8 178 aa9.41□□□□□ -0.9
ZNF548-210ENST00000600442 PRR9Q5T870 116 aa9.41□□□□□ -0.9
ZNF548-210ENST00000600442 SYT8Q8NBV8 401 aa9.41□□□□□ -0.9
ZNF548-210ENST00000600442 MRPL18Q9H0U6 180 aaKnown RBP9.41□□□□□ -0.9
ZNF548-210ENST00000600442 GOLT1BQ9Y3E0 138 aa9.41□□□□□ -0.9
ZNF548-210ENST00000600442 CBY3A6NI87 242 aa9.4□□□□□ -0.9
ZNF548-210ENST00000600442 ZNF324O75467 553 aaPredicted RBP9.4□□□□□ -0.9
ZNF548-210ENST00000600442 TRGC1P0CF51 173 aa9.4□□□□□ -0.9
ZNF548-210ENST00000600442 IGLL1P15814 213 aa9.4□□□□□ -0.9
ZNF548-210ENST00000600442 LINC01587Q99440 93 aa9.4□□□□□ -0.9
ZNF548-210ENST00000600442 A0A1B0GXF2 115 aa9.39□□□□□ -0.91
ZNF548-210ENST00000600442 ARMS2P0C7Q2 107 aa9.39□□□□□ -0.91
ZNF548-210ENST00000600442 TMEM136Q6ZRR5 245 aa9.39□□□□□ -0.91
ZNF548-210ENST00000600442 ZFP82Q8N141 532 aa9.39□□□□□ -0.91
ZNF548-210ENST00000600442 LINC00467Q9BRT7 94 aa9.39□□□□□ -0.91
ZNF548-210ENST00000600442 SSBP4Q9BWG4 385 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-210ENST00000600442 CNFNQ9BYD5 112 aa9.39□□□□□ -0.91
ZNF548-210ENST00000600442 C11orf21Q9P2W6 132 aa9.39□□□□□ -0.91
ZNF548-210ENST00000600442 TIMM8BQ9Y5J9 83 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-210ENST00000600442 KMT2CQ8NEZ4 4911 aaKnown RBP9.38□□□□□ -0.91
ZNF548-210ENST00000600442 IGHV4-4A0A075B6R2 117 aa9.38□□□□□ -0.91
ZNF548-210ENST00000600442 H3BVH4 76 aa9.38□□□□□ -0.91
ZNF548-210ENST00000600442 SNAI2O43623 268 aa9.38□□□□□ -0.91
ZNF548-210ENST00000600442 SMIM17P0DL12 118 aa9.38□□□□□ -0.91
ZNF548-210ENST00000600442 NTF3P20783 257 aa9.38□□□□□ -0.91
ZNF548-210ENST00000600442 APOC4P55056 127 aa9.38□□□□□ -0.91
ZNF548-210ENST00000600442 FXYD7P58549 80 aa9.38□□□□□ -0.91
ZNF548-210ENST00000600442 ZNF124Q15973 351 aa9.38□□□□□ -0.91
ZNF548-210ENST00000600442 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
ZNF548-210ENST00000600442 G3V4G9 280 aa9.37□□□□□ -0.91
ZNF548-210ENST00000600442 ZNF415Q09FC8 603 aa9.37□□□□□ -0.91
ZNF548-210ENST00000600442 ZNF493Q6ZR52 646 aa9.37□□□□□ -0.91
ZNF548-210ENST00000600442 CSTL1Q9H114 145 aa9.37□□□□□ -0.91
ZNF548-210ENST00000600442 C19orf73Q9NVV2 129 aa9.37□□□□□ -0.91
ZNF548-210ENST00000600442 LOC102724200A0A096LPH7 203 aaPredicted RBP9.36□□□□□ -0.91
ZNF548-210ENST00000600442 GNRH2O43555 120 aa9.36□□□□□ -0.91
ZNF548-210ENST00000600442 PPBPP02775 128 aa9.36□□□□□ -0.91
ZNF548-210ENST00000600442 PRB2P02812 416 aaPredicted RBP9.36□□□□□ -0.91
ZNF548-210ENST00000600442 HTN1P15515 57 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms