RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ZNF324O75467 553 aaPredicted RBP13.02□□□□□ -0.33
PNKP-213ENST00000599543 ZNF680Q8NEM1 530 aa13.02□□□□□ -0.33
PNKP-213ENST00000599543 Q9H8V8 135 aa13.02□□□□□ -0.33
PNKP-213ENST00000599543 SULT1A2P50226 295 aa13.01□□□□□ -0.33
PNKP-213ENST00000599543 TTC32Q5I0X7 151 aa13.01□□□□□ -0.33
PNKP-213ENST00000599543 MUC21Q5SSG8 566 aa13.01□□□□□ -0.33
PNKP-213ENST00000599543 DPPA3Q6W0C5 159 aa13.01□□□□□ -0.33
PNKP-213ENST00000599543 Q6ZTI0 123 aa13.01□□□□□ -0.33
PNKP-213ENST00000599543 PRNTQ86SH4 94 aa13.01□□□□□ -0.33
PNKP-213ENST00000599543 C8orf49Q96NF6 230 aa13.01□□□□□ -0.33
PNKP-213ENST00000599543 TP53TG3Q9ULZ0 132 aa13.01□□□□□ -0.33
PNKP-213ENST00000599543 PSG8Q9UQ74 426 aa13.01□□□□□ -0.33
PNKP-213ENST00000599543 RYR1P21817 5038 aa13□□□□□ -0.33
PNKP-213ENST00000599543 TRGV2A0A075B6R0 118 aa13□□□□□ -0.33
PNKP-213ENST00000599543 C16orf90A8MZG2 172 aa13□□□□□ -0.33
PNKP-213ENST00000599543 H3BNG1 76 aa13□□□□□ -0.33
PNKP-213ENST00000599543 PEX7O00628 323 aa13□□□□□ -0.33
PNKP-213ENST00000599543 IGLV2-11P01706 119 aa13□□□□□ -0.33
PNKP-213ENST00000599543 EIF5AL1Q6IS14 154 aaKnown RBP13□□□□□ -0.33
PNKP-213ENST00000599543 ALKAL2Q6UX46 152 aa13□□□□□ -0.33
PNKP-213ENST00000599543 CYB561D1Q8N8Q1 229 aa13□□□□□ -0.33
PNKP-213ENST00000599543 GSN-AS1Q9NRJ2 163 aa13□□□□□ -0.33
PNKP-213ENST00000599543 ARL6IP6Q8N6S5 226 aa12.99□□□□□ -0.33
PNKP-213ENST00000599543 TREM1Q9NP99 234 aa12.99□□□□□ -0.33
PNKP-213ENST00000599543 NAGKQ9UJ70 344 aa12.99□□□□□ -0.33
PNKP-213ENST00000599543 RGS13O14921 159 aa12.98□□□□□ -0.33
PNKP-213ENST00000599543 NMBP08949 121 aa12.98□□□□□ -0.33
PNKP-213ENST00000599543 FLI1Q01543 452 aaPredicted RBP12.98□□□□□ -0.33
PNKP-213ENST00000599543 EIF4E3Q8N5X7 224 aaKnown RBP12.98□□□□□ -0.33
PNKP-213ENST00000599543 C11orf72Q8NBR9 251 aa12.98□□□□□ -0.33
PNKP-213ENST00000599543 LINC00467Q9BRT7 94 aa12.98□□□□□ -0.33
PNKP-213ENST00000599543 UPK3BQ9BT76 320 aa12.98□□□□□ -0.33
PNKP-213ENST00000599543 GNG13Q9P2W3 67 aa12.98□□□□□ -0.33
PNKP-213ENST00000599543 TRGV1A0A0A0MS02 117 aa12.97□□□□□ -0.33
PNKP-213ENST00000599543 K7EQM0 130 aa12.97□□□□□ -0.33
PNKP-213ENST00000599543 RAB5CP51148 216 aa12.97□□□□□ -0.33
PNKP-213ENST00000599543 ESRGQ1W209 222 aa12.97□□□□□ -0.33
PNKP-213ENST00000599543 ANXA2RQ3ZCQ2 193 aa12.97□□□□□ -0.33
PNKP-213ENST00000599543 LENEPQ9Y5L5 61 aa12.97□□□□□ -0.33
PNKP-213ENST00000599543 IGHV1OR15-1A0A075B7D0 117 aa12.96□□□□□ -0.33
PNKP-213ENST00000599543 TRBV7-9A0A0J9YWB2 115 aa12.96□□□□□ -0.33
PNKP-213ENST00000599543 SERTM2A0A1B0GWG4 89 aa12.96□□□□□ -0.33
PNKP-213ENST00000599543 ZNF80P51504 273 aaPredicted RBP12.96□□□□□ -0.33
PNKP-213ENST00000599543 TMEM75Q8N9X5 138 aa12.96□□□□□ -0.33
PNKP-213ENST00000599543 C18orf15Q96N68 181 aa12.96□□□□□ -0.33
PNKP-213ENST00000599543 NDFIP1Q9BT67 221 aa12.96□□□□□ -0.33
PNKP-213ENST00000599543 MRPS16Q9Y3D3 137 aaKnown RBP12.96□□□□□ -0.33
PNKP-213ENST00000599543 SCO2A0A1W2PP80 73 aa12.95□□□□□ -0.34
PNKP-213ENST00000599543 TCL1AP56279 114 aa12.95□□□□□ -0.34
PNKP-213ENST00000599543 Q86TA4 180 aa12.95□□□□□ -0.34
PNKP-213ENST00000599543 KRTAP1-5Q9BYS1 174 aa12.95□□□□□ -0.34
PNKP-213ENST00000599543 KLF12Q9Y4X4 402 aa12.95□□□□□ -0.34
PNKP-213ENST00000599543 ARL2-SNX15V9GYD0 113 aa12.95□□□□□ -0.34
PNKP-213ENST00000599543 A0A1W2PPQ1 181 aa12.94□□□□□ -0.34
PNKP-213ENST00000599543 IBA57Q5T440 356 aaKnown RBP12.94□□□□□ -0.34
PNKP-213ENST00000599543 Q6AWC8 147 aa12.94□□□□□ -0.34
PNKP-213ENST00000599543 VSIG2Q96IQ7 327 aa12.94□□□□□ -0.34
PNKP-213ENST00000599543 NKX6-2Q9C056 277 aaPredicted RBP12.94□□□□□ -0.34
PNKP-213ENST00000599543 HSPG2P98160 4391 aa12.94□□□□□ -0.34
PNKP-213ENST00000599543 ABCA13Q86UQ4 5058 aa12.93□□□□□ -0.34
PNKP-213ENST00000599543 A0A096LPF7 62 aa12.93□□□□□ -0.34
PNKP-213ENST00000599543 SPINK4O60575 86 aa12.93□□□□□ -0.34
PNKP-213ENST00000599543 GCGP01275 180 aa12.93□□□□□ -0.34
PNKP-213ENST00000599543 TMEM183BQ1AE95 376 aa12.93□□□□□ -0.34
PNKP-213ENST00000599543 TMEM183AQ8IXX5 376 aa12.93□□□□□ -0.34
PNKP-213ENST00000599543 HIST1H2BAQ96A08 127 aa12.93□□□□□ -0.34
PNKP-213ENST00000599543 C11orf21Q9P2W6 132 aa12.93□□□□□ -0.34
PNKP-213ENST00000599543 TRAV1-1A0A0B4J248 108 aa12.92□□□□□ -0.34
PNKP-213ENST00000599543 GNRH2O43555 120 aa12.92□□□□□ -0.34
PNKP-213ENST00000599543 CDK2AP2O75956 126 aa12.92□□□□□ -0.34
PNKP-213ENST00000599543 AKR1C3P42330 323 aa12.92□□□□□ -0.34
PNKP-213ENST00000599543 PPT1P50897 306 aa12.92□□□□□ -0.34
PNKP-213ENST00000599543 MDFICQ9P1T7 246 aa12.92□□□□□ -0.34
PNKP-213ENST00000599543 LRP1BQ9NZR2 4599 aa12.92□□□□□ -0.34
PNKP-213ENST00000599543 TRAV21A0A0B4J279 112 aa12.91□□□□□ -0.34
PNKP-213ENST00000599543 UBE2G1P62253 170 aa12.91□□□□□ -0.34
PNKP-213ENST00000599543 SMUG1Q53HV7 270 aa12.91□□□□□ -0.34
PNKP-213ENST00000599543 FAM159AQ6UWV7 190 aa12.91□□□□□ -0.34
PNKP-213ENST00000599543 SPATA12Q7Z6I5 190 aa12.91□□□□□ -0.34
PNKP-213ENST00000599543 NHLRC2Q8NBF2 726 aa12.91□□□□□ -0.34
PNKP-213ENST00000599543 MANBALQ9NQG1 85 aa12.91□□□□□ -0.34
PNKP-213ENST00000599543 TEX46H3BTG2 121 aa12.9□□□□□ -0.34
PNKP-213ENST00000599543 BTF3P20290 206 aaKnown RBP12.9□□□□□ -0.34
PNKP-213ENST00000599543 MRPL16Q9NX20 251 aaKnown RBP12.9□□□□□ -0.34
PNKP-213ENST00000599543 ICOSQ9Y6W8 199 aa12.9□□□□□ -0.34
PNKP-213ENST00000599543 PAX4O43316 350 aa12.89□□□□□ -0.35
PNKP-213ENST00000599543 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
PNKP-213ENST00000599543 ZNF415Q09FC8 603 aa12.89□□□□□ -0.35
PNKP-213ENST00000599543 SAPCD1Q5SSQ6 148 aa12.89□□□□□ -0.35
PNKP-213ENST00000599543 PCNPQ8WW12 178 aaKnown RBP12.89□□□□□ -0.35
PNKP-213ENST00000599543 ZC2HC1AQ96GY0 325 aa12.89□□□□□ -0.35
PNKP-213ENST00000599543 FMC1Q96HJ9 113 aa12.89□□□□□ -0.35
PNKP-213ENST00000599543 TYMSP04818 313 aa12.88□□□□□ -0.35
PNKP-213ENST00000599543 DERL1Q9BUN8 251 aa12.88□□□□□ -0.35
PNKP-213ENST00000599543 FBLL1A6NHQ2 334 aaKnown RBP12.87□□□□□ -0.35
PNKP-213ENST00000599543 SIVA1O15304 175 aa12.87□□□□□ -0.35
PNKP-213ENST00000599543 CRIP1P50238 77 aa12.87□□□□□ -0.35
PNKP-213ENST00000599543 SLAQ13239 276 aa12.87□□□□□ -0.35
PNKP-213ENST00000599543 KRTAP4-5Q9BYR2 181 aa12.87□□□□□ -0.35
PNKP-213ENST00000599543 PRO0255Q9UI72 69 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms