RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 H2BFSP57053 126 aa9.89□□□□□ -0.83
EBI3-202ENST00000599339 GOLT1AQ6ZVE7 132 aa9.89□□□□□ -0.83
EBI3-202ENST00000599339 NHLRC2Q8NBF2 726 aa9.89□□□□□ -0.83
EBI3-202ENST00000599339 SDF2L1Q9HCN8 221 aa9.89□□□□□ -0.83
EBI3-202ENST00000599339 IGHV3-16A0A0C4DH30 117 aa9.88□□□□□ -0.83
EBI3-202ENST00000599339 A0A1W2PPV4 95 aa9.88□□□□□ -0.83
EBI3-202ENST00000599339 PSCAO43653 123 aa9.88□□□□□ -0.83
EBI3-202ENST00000599339 SSNA1O43805 119 aa9.88□□□□□ -0.83
EBI3-202ENST00000599339 MPC2O95563 127 aa9.88□□□□□ -0.83
EBI3-202ENST00000599339 PPT1P50897 306 aa9.88□□□□□ -0.83
EBI3-202ENST00000599339 TIRAPP58753 221 aa9.88□□□□□ -0.83
EBI3-202ENST00000599339 ACOT6Q3I5F7 207 aaPredicted RBP9.88□□□□□ -0.83
EBI3-202ENST00000599339 SMIM3Q9BZL3 60 aa9.88□□□□□ -0.83
EBI3-202ENST00000599339 TREM1Q9NP99 234 aa9.88□□□□□ -0.83
EBI3-202ENST00000599339 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
EBI3-202ENST00000599339 IGHV3-38A0A0C4DH36 116 aa9.87□□□□□ -0.83
EBI3-202ENST00000599339 GNRH2O43555 120 aa9.87□□□□□ -0.83
EBI3-202ENST00000599339 GCSHP23434 173 aa9.87□□□□□ -0.83
EBI3-202ENST00000599339 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
EBI3-202ENST00000599339 Q5VSD8 79 aa9.87□□□□□ -0.83
EBI3-202ENST00000599339 NDFIP1Q9BT67 221 aa9.87□□□□□ -0.83
EBI3-202ENST00000599339 TRAV8-6A0A0B4J262 113 aa9.86□□□□□ -0.83
EBI3-202ENST00000599339 SERTM2A0A1B0GWG4 89 aa9.86□□□□□ -0.83
EBI3-202ENST00000599339 FBLL1A6NHQ2 334 aaKnown RBP9.86□□□□□ -0.83
EBI3-202ENST00000599339 F6UZH7 168 aa9.86□□□□□ -0.83
EBI3-202ENST00000599339 CIDEAO60543 219 aa9.86□□□□□ -0.83
EBI3-202ENST00000599339 TYMSP04818 313 aa9.86□□□□□ -0.83
EBI3-202ENST00000599339 PFN1P07737 140 aaKnown RBP9.86□□□□□ -0.83
EBI3-202ENST00000599339 GATA1P15976 413 aaPredicted RBP9.86□□□□□ -0.83
EBI3-202ENST00000599339 ASB13Q8WXK3 278 aa9.86□□□□□ -0.83
EBI3-202ENST00000599339 PRADC1Q9BSG0 188 aa9.86□□□□□ -0.83
EBI3-202ENST00000599339 MARVELD1Q9BSK0 173 aa9.86□□□□□ -0.83
EBI3-202ENST00000599339 LOC100131303A0A0U1RQF7 123 aa9.85□□□□□ -0.83
EBI3-202ENST00000599339 LINC01556Q5JQF7 62 aa9.85□□□□□ -0.83
EBI3-202ENST00000599339 IGLV5-52A0A0A0MRZ9 124 aa9.84□□□□□ -0.83
EBI3-202ENST00000599339 TRAV8-1A0A0A6YYK1 113 aa9.84□□□□□ -0.83
EBI3-202ENST00000599339 K7EQM0 130 aa9.84□□□□□ -0.83
EBI3-202ENST00000599339 EIF3GO75821 320 aaKnown RBP eCLIP9.84□□□□□ -0.83
EBI3-202ENST00000599339 DEFA1P59665 94 aa9.84□□□□□ -0.83
EBI3-202ENST00000599339 DEFA3P59666 94 aa9.84□□□□□ -0.83
EBI3-202ENST00000599339 RHOHQ15669 191 aa9.84□□□□□ -0.83
EBI3-202ENST00000599339 OR10J3Q5JRS4 329 aa9.84□□□□□ -0.83
EBI3-202ENST00000599339 OR10G9Q8NGN4 311 aa9.84□□□□□ -0.83
EBI3-202ENST00000599339 OR10G7Q8NGN6 311 aa9.84□□□□□ -0.83
EBI3-202ENST00000599339 NTN5Q8WTR8 489 aaPredicted RBP9.84□□□□□ -0.83
EBI3-202ENST00000599339 TRBV6-4A0A1B0GX49 114 aa9.83□□□□□ -0.84
EBI3-202ENST00000599339 RAB2AP61019 212 aa9.83□□□□□ -0.84
EBI3-202ENST00000599339 IFITM3Q01628 133 aa9.83□□□□□ -0.84
EBI3-202ENST00000599339 ZNF876PQ49A33 203 aa9.83□□□□□ -0.84
EBI3-202ENST00000599339 ZFP69Q49AA0 526 aa9.83□□□□□ -0.84
EBI3-202ENST00000599339 TVP23CQ96ET8 276 aa9.83□□□□□ -0.84
EBI3-202ENST00000599339 IBA57-AS1B1ANH7 110 aa9.82□□□□□ -0.84
EBI3-202ENST00000599339 FAM229AH3BQW9 127 aa9.82□□□□□ -0.84
EBI3-202ENST00000599339 TAAR5O14804 337 aa9.82□□□□□ -0.84
EBI3-202ENST00000599339 CDC34P49427 236 aaPredicted RBP9.82□□□□□ -0.84
EBI3-202ENST00000599339 GNG5P63218 68 aa9.82□□□□□ -0.84
EBI3-202ENST00000599339 SLC25A29Q8N8R3 303 aa9.82□□□□□ -0.84
EBI3-202ENST00000599339 C5orf17Q8NAS9 161 aa9.82□□□□□ -0.84
EBI3-202ENST00000599339 TMEM70Q9BUB7 260 aa9.82□□□□□ -0.84
EBI3-202ENST00000599339 SH3BGRL3Q9H299 93 aa9.82□□□□□ -0.84
EBI3-202ENST00000599339 HMGB3O15347 200 aaKnown RBP9.81□□□□□ -0.84
EBI3-202ENST00000599339 RS1O15537 224 aa9.81□□□□□ -0.84
EBI3-202ENST00000599339 ARL14EPLP0DKL9 152 aa9.81□□□□□ -0.84
EBI3-202ENST00000599339 CFAP126Q5VTH2 177 aa9.81□□□□□ -0.84
EBI3-202ENST00000599339 WFDC1Q9HC57 220 aa9.81□□□□□ -0.84
EBI3-202ENST00000599339 FAT1Q14517 4588 aa9.81□□□□□ -0.84
EBI3-202ENST00000599339 LRCOL1A6NCL2 159 aa9.8□□□□□ -0.84
EBI3-202ENST00000599339 GCGP01275 180 aa9.8□□□□□ -0.84
EBI3-202ENST00000599339 SMR3BP02814 79 aaPredicted RBP9.8□□□□□ -0.84
EBI3-202ENST00000599339 TCRAP04437 139 aa9.8□□□□□ -0.84
EBI3-202ENST00000599339 STAG3L2P0CL84 134 aa9.8□□□□□ -0.84
EBI3-202ENST00000599339 STAG3L3P0CL85 134 aa9.8□□□□□ -0.84
EBI3-202ENST00000599339 MGST1P10620 155 aaKnown RBP9.8□□□□□ -0.84
EBI3-202ENST00000599339 LELP1Q5T871 98 aa9.8□□□□□ -0.84
EBI3-202ENST00000599339 SGK494Q96LW2 274 aa9.8□□□□□ -0.84
EBI3-202ENST00000599339 Q9HAA7 133 aa9.8□□□□□ -0.84
EBI3-202ENST00000599339 PSG8Q9UQ74 426 aa9.8□□□□□ -0.84
EBI3-202ENST00000599339 HERC1Q15751 4861 aa9.8□□□□□ -0.84
EBI3-202ENST00000599339 IGHV3-30P01768 117 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 IGHV3-33P01772 117 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 MBP02144 154 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 IGHV3-30-3P0DP02 117 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 IGHV3-30-5P0DP03 117 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 LAGE3Q14657 143 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 SMUG1Q53HV7 270 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 Q8N814 137 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 OR2G3Q8NGZ4 309 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 PTH2Q96A98 100 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 C9orf85Q96MD7 179 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 TM2D2Q9BX73 214 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 GTSF1LQ9H1H1 148 aa9.79□□□□□ -0.84
EBI3-202ENST00000599339 IGHV3-73A0A0B4J1V6 119 aa9.78□□□□□ -0.84
EBI3-202ENST00000599339 GCHFRP30047 84 aa9.78□□□□□ -0.84
EBI3-202ENST00000599339 FLI1Q01543 452 aaPredicted RBP9.78□□□□□ -0.84
EBI3-202ENST00000599339 Q6ZSN1 163 aa9.78□□□□□ -0.84
EBI3-202ENST00000599339 HSD17B11Q8NBQ5 300 aa9.78□□□□□ -0.84
EBI3-202ENST00000599339 RAB24Q969Q5 203 aa9.78□□□□□ -0.84
EBI3-202ENST00000599339 PSMG3Q9BT73 122 aaPredicted RBP9.78□□□□□ -0.84
EBI3-202ENST00000599339 TMEM167BQ9NRX6 74 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms