RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, human

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00343-208	ENST00000599264	IGHV3-30	P01768	117 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	IGHV3-33	P01772	117 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	IGKV1D-39	P04432	117 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	CHTF8	P0CG12	524 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	IGHV3-30-3	P0DP02	117 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	IGHV3-30-5	P0DP03	117 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	SLC25A4	P12235	298 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	OR10A3	P58181	314 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	PLP1	P60201	277 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	RPS25	P62851	125 aa	Known RBP	3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	HIST1H1A	Q02539	215 aa	Predicted RBP	3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	OR2F1	Q13607	317 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	ZNF846	Q147U1	533 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	SLC35G3	Q8N808	338 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	ZNF738	Q8NE65	137 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	RSG1	Q9BU20	258 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	MRPL32	Q9BYC8	188 aa	Known RBP	3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	AP4S1	Q9Y587	144 aa		3.13	□□□□□ -1.91
LINC00343-208	ENST00000599264	GOSR2	O14653	212 aa		3.12	□□□□□ -1.91
LINC00343-208	ENST00000599264	PPP1R2P9	O14990	202 aa		3.12	□□□□□ -1.91
LINC00343-208	ENST00000599264	RANBP1	P43487	201 aa		3.12	□□□□□ -1.91
LINC00343-208	ENST00000599264	GALR1	P47211	349 aa		3.12	□□□□□ -1.91
LINC00343-208	ENST00000599264	IDNK	Q5T6J7	187 aa		3.12	□□□□□ -1.91
LINC00343-208	ENST00000599264	ZFP2	Q6ZN57	461 aa		3.12	□□□□□ -1.91
LINC00343-208	ENST00000599264	ATP6V0E2	Q8NHE4	81 aa		3.12	□□□□□ -1.91
LINC00343-208	ENST00000599264	BORCS5	Q969J3	196 aa		3.12	□□□□□ -1.91
LINC00343-208	ENST00000599264	MRGPRF	Q96AM1	343 aa		3.12	□□□□□ -1.91
LINC00343-208	ENST00000599264	TXNDC17	Q9BRA2	123 aa		3.12	□□□□□ -1.91
LINC00343-208	ENST00000599264	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.12	□□□□□ -1.91
LINC00343-208	ENST00000599264	MUC19	Q7Z5P9	8384 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	TRAV8-3	A0A0A6YYJ7	113 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	TRAV8-6	A0A0B4J262	113 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	LOC100130705	A0A1B0GUX0	176 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	MYL12B	O14950	172 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	ORM1	P02763	201 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	PSMA1	P25786	263 aa	Known RBP	3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	BTC	P35070	178 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	HTR2B	P41595	481 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	GNG2	P59768	71 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	KIAA0087	Q14695	138 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	TMEM91	Q6ZNR0	172 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	ARRDC1	Q8N5I2	433 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	ZNF680	Q8NEM1	530 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	RNASEH2C	Q8TDP1	164 aa	Known RBP	3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	ACY3	Q96HD9	319 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	SLC25A31	Q9H0C2	315 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	ATG5	Q9H1Y0	275 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	MRPL16	Q9NX20	251 aa	Known RBP	3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	VAX2	Q9UIW0	290 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	KLF12	Q9Y4X4	402 aa		3.11	□□□□□ -1.91
LINC00343-208	ENST00000599264	IGKV1D-37	A0A075B6S9	117 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	TRGV4	A0A0C4DH28	118 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	GPR31	O00270	319 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	IGKV1-5	P01602	117 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	CXCL3	P19876	107 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	CBX5	P45973	191 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	TCL1A	P56279	114 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	ZNF90	Q03938	601 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	CIRBP	Q14011	172 aa	Known RBP	3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	OR10J3	Q5JRS4	329 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	IQCF2	Q8IXL9	164 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	PDCD10	Q9BUL8	212 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	ENY2	Q9NPA8	101 aa		3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	CSDC2	Q9Y534	153 aa	Known RBP	3.1	□□□□□ -1.91
LINC00343-208	ENST00000599264	TRAV8-1	A0A0A6YYK1	113 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	TRAV12-3	A0A0B4J271	114 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	IFITM5	A6NNB3	132 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	CASQ2	O14958	399 aa	Predicted RBP	3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	ARL6IP5	O75915	188 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	SFTA3	P0C7M3	94 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	TAS2R20	P59543	309 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	PRR3	P79522	188 aa	Known RBP	3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	DNAL1	Q4LDG9	190 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	IBA57	Q5T440	356 aa	Known RBP	3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	SPINK6	Q6UWN8	80 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	SDIM1	Q6ZPB5	146 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	C9orf163	Q8N9P6	203 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	DNAJC30	Q96LL9	226 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	CCDC90B	Q9GZT6	254 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	FXYD6	Q9H0Q3	95 aa		3.09	□□□□□ -1.91
LINC00343-208	ENST00000599264	IGKV1OR2-108	A0A075B7D4	117 aa		3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	SMCO3	A2RU48	225 aa		3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	SNRPGP15	A8MWD9	76 aa		3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	GYG2	O15488	501 aa		3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	HRH1	P35367	487 aa		3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	DAZ4	Q86SG3	579 aa	Known RBP	3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	C10orf67	Q8IYJ2	551 aa		3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	OR10G4	Q8NGN3	311 aa		3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	ZNF431	Q8TF32	576 aa	Predicted RBP	3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	RMI2	Q96E14	147 aa		3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	GPR82	Q96P67	336 aa		3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	ZNF2	Q9BSG1	426 aa	Predicted RBP	3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	LSM2	Q9Y333	95 aa	Known RBP	3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	TMEM56-RWDD3	S4R434	201 aa		3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	SSPO	A2VEC9	5147 aa		3.08	□□□□□ -1.92
LINC00343-208	ENST00000599264	LINC00854	A0A1B0GVQ3	168 aa		3.07	□□□□□ -1.92
LINC00343-208	ENST00000599264	GGTLC3	B5MD39	225 aa		3.07	□□□□□ -1.92
LINC00343-208	ENST00000599264	PITX3	O75364	302 aa		3.07	□□□□□ -1.92
LINC00343-208	ENST00000599264	AKR1C2	P52895	323 aa		3.07	□□□□□ -1.92
LINC00343-208	ENST00000599264	SPCS3	P61009	180 aa		3.07	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms