RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 PRNTQ86SH4 94 aa10.13□□□□□ -0.79
XRCC1-208ENST00000598422 PCNPQ8WW12 178 aaKnown RBP10.13□□□□□ -0.79
XRCC1-208ENST00000598422 UPK3BQ9BT76 320 aa10.13□□□□□ -0.79
XRCC1-208ENST00000598422 HHLA3Q9XRX5 114 aa10.13□□□□□ -0.79
XRCC1-208ENST00000598422 IGHV3-16A0A0C4DH30 117 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 M0R2P5 195 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 GNRH2O43555 120 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 GCGP01275 180 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 TYMSP04818 313 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 SFTA3P0C7M3 94 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 CRYBA4P53673 196 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 UBE2G2P60604 165 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 FHL2Q14192 279 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 ZNF726P1Q15940 193 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 SMUG1Q53HV7 270 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 TMEM75Q8N9X5 138 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 RASL10AQ92737 203 aa10.12□□□□□ -0.79
XRCC1-208ENST00000598422 MAP1LC3B2A6NCE7 125 aa10.11□□□□□ -0.79
XRCC1-208ENST00000598422 PFN1P07737 140 aaKnown RBP10.11□□□□□ -0.79
XRCC1-208ENST00000598422 FGF8P55075 233 aaPredicted RBP10.11□□□□□ -0.79
XRCC1-208ENST00000598422 MRPL23Q16540 153 aaKnown RBP10.11□□□□□ -0.79
XRCC1-208ENST00000598422 SAPCD1Q5SSQ6 148 aa10.11□□□□□ -0.79
XRCC1-208ENST00000598422 OR4C5Q8NGB2 326 aa10.11□□□□□ -0.79
XRCC1-208ENST00000598422 STOML3Q8TAV4 291 aa10.11□□□□□ -0.79
XRCC1-208ENST00000598422 ZNF479Q96JC4 524 aa10.11□□□□□ -0.79
XRCC1-208ENST00000598422 MAP1LC3BQ9GZQ8 125 aa10.11□□□□□ -0.79
XRCC1-208ENST00000598422 DNAH2Q9P225 4427 aa10.1□□□□□ -0.79
XRCC1-208ENST00000598422 TRAV4A0A0B4J268 109 aa10.1□□□□□ -0.79
XRCC1-208ENST00000598422 SRIP30626 198 aa10.1□□□□□ -0.79
XRCC1-208ENST00000598422 ZNF345Q14585 488 aa10.1□□□□□ -0.79
XRCC1-208ENST00000598422 NKX6-2Q9C056 277 aaPredicted RBP10.1□□□□□ -0.79
XRCC1-208ENST00000598422 CYTL1Q9NRR1 136 aa10.1□□□□□ -0.79
XRCC1-208ENST00000598422 TRAV34A0A0B4J273 112 aa10.09□□□□□ -0.79
XRCC1-208ENST00000598422 A0A1W2PPQ1 181 aa10.09□□□□□ -0.79
XRCC1-208ENST00000598422 PEX7O00628 323 aa10.09□□□□□ -0.79
XRCC1-208ENST00000598422 IGLV2-11P01706 119 aa10.09□□□□□ -0.79
XRCC1-208ENST00000598422 ORM1P02763 201 aa10.09□□□□□ -0.79
XRCC1-208ENST00000598422 ZNF80P51504 273 aaPredicted RBP10.09□□□□□ -0.79
XRCC1-208ENST00000598422 NEGR1Q7Z3B1 354 aa10.09□□□□□ -0.79
XRCC1-208ENST00000598422 KCNRGQ8N5I3 272 aa10.09□□□□□ -0.79
XRCC1-208ENST00000598422 FAT2Q9NYQ8 4349 aa10.09□□□□□ -0.79
XRCC1-208ENST00000598422 KANTRA0A1W2PQU2 76 aa10.08□□□□□ -0.8
XRCC1-208ENST00000598422 FAM74A7A6NL05 159 aa10.08□□□□□ -0.8
XRCC1-208ENST00000598422 C9JCJ5 164 aa10.08□□□□□ -0.8
XRCC1-208ENST00000598422 NXPH4O95158 308 aa10.08□□□□□ -0.8
XRCC1-208ENST00000598422 GYPEP15421 78 aa10.08□□□□□ -0.8
XRCC1-208ENST00000598422 HIST1H2BAQ96A08 127 aa10.08□□□□□ -0.8
XRCC1-208ENST00000598422 TXNDC17Q9BRA2 123 aa10.08□□□□□ -0.8
XRCC1-208ENST00000598422 ZNF471Q9BX82 626 aaPredicted RBP10.08□□□□□ -0.8
XRCC1-208ENST00000598422 ARL2-SNX15V9GYD0 113 aa10.08□□□□□ -0.8
XRCC1-208ENST00000598422 NACAE9PAV3 2078 aa10.07□□□□□ -0.8
XRCC1-208ENST00000598422 A0A0D9SG52 128 aa10.07□□□□□ -0.8
XRCC1-208ENST00000598422 SIVA1O15304 175 aa10.07□□□□□ -0.8
XRCC1-208ENST00000598422 TNP2Q05952 138 aa10.07□□□□□ -0.8
XRCC1-208ENST00000598422 ZNF876PQ49A33 203 aa10.07□□□□□ -0.8
XRCC1-208ENST00000598422 Q86TA4 180 aa10.07□□□□□ -0.8
XRCC1-208ENST00000598422 LINC00479Q96M42 142 aa10.07□□□□□ -0.8
XRCC1-208ENST00000598422 C11orf21Q9P2W6 132 aa10.07□□□□□ -0.8
XRCC1-208ENST00000598422 HMSDA8MTL9 139 aa10.06□□□□□ -0.8
XRCC1-208ENST00000598422 K7EQD1 137 aa10.06□□□□□ -0.8
XRCC1-208ENST00000598422 BCL2L11O43521 198 aa10.06□□□□□ -0.8
XRCC1-208ENST00000598422 S100A4P26447 101 aaKnown RBP10.06□□□□□ -0.8
XRCC1-208ENST00000598422 UBE2G1P62253 170 aa10.06□□□□□ -0.8
XRCC1-208ENST00000598422 EIF5AP63241 154 aaKnown RBP10.06□□□□□ -0.8
XRCC1-208ENST00000598422 CST9LP1Q5W188 147 aa10.06□□□□□ -0.8
XRCC1-208ENST00000598422 FAM213BQ8TBF2 198 aa10.06□□□□□ -0.8
XRCC1-208ENST00000598422 KRTAP1-5Q9BYS1 174 aa10.06□□□□□ -0.8
XRCC1-208ENST00000598422 UMAD1C9J7I0 102 aa10.05□□□□□ -0.8
XRCC1-208ENST00000598422 PFDN1O60925 122 aa10.05□□□□□ -0.8
XRCC1-208ENST00000598422 SEC11BP0C7V7 166 aa10.05□□□□□ -0.8
XRCC1-208ENST00000598422 FHITP49789 147 aa10.05□□□□□ -0.8
XRCC1-208ENST00000598422 LYPD5Q6UWN5 251 aa10.05□□□□□ -0.8
XRCC1-208ENST00000598422 NHLRC2Q8NBF2 726 aa10.05□□□□□ -0.8
XRCC1-208ENST00000598422 TCEAL7Q9BRU2 100 aa10.05□□□□□ -0.8
XRCC1-208ENST00000598422 FABP5P3A8MUU1 101 aa10.04□□□□□ -0.8
XRCC1-208ENST00000598422 BTF3P20290 206 aaKnown RBP10.04□□□□□ -0.8
XRCC1-208ENST00000598422 ASIPP42127 132 aa10.04□□□□□ -0.8
XRCC1-208ENST00000598422 AKR1C3P42330 323 aa10.04□□□□□ -0.8
XRCC1-208ENST00000598422 SH2D6Q7Z4S9 175 aa10.04□□□□□ -0.8
XRCC1-208ENST00000598422 OR11H4Q8NGC9 324 aa10.04□□□□□ -0.8
XRCC1-208ENST00000598422 SFT2D1Q8WV19 159 aa10.04□□□□□ -0.8
XRCC1-208ENST00000598422 FMC1Q96HJ9 113 aa10.04□□□□□ -0.8
XRCC1-208ENST00000598422 C9orf85Q96MD7 179 aa10.04□□□□□ -0.8
XRCC1-208ENST00000598422 MUC4Q99102 2169 aa10.04□□□□□ -0.8
XRCC1-208ENST00000598422 DNAH17Q9UFH2 4485 aa10.03□□□□□ -0.8
XRCC1-208ENST00000598422 CIDEAO60543 219 aa10.03□□□□□ -0.8
XRCC1-208ENST00000598422 MED14OSP0DP75 135 aa10.03□□□□□ -0.8
XRCC1-208ENST00000598422 GATA1P15976 413 aaPredicted RBP10.03□□□□□ -0.8
XRCC1-208ENST00000598422 ZNF575Q86XF7 245 aa10.03□□□□□ -0.8
XRCC1-208ENST00000598422 PRADC1Q9BSG0 188 aa10.03□□□□□ -0.8
XRCC1-208ENST00000598422 ZFP30Q9Y2G7 519 aa10.03□□□□□ -0.8
XRCC1-208ENST00000598422 HERC2O95714 4834 aa10.02□□□□□ -0.81
XRCC1-208ENST00000598422 TRAV9-2A0A087WT02 112 aa10.02□□□□□ -0.81
XRCC1-208ENST00000598422 IGHV3-73A0A0B4J1V6 119 aa10.02□□□□□ -0.81
XRCC1-208ENST00000598422 A0A1B0GV50 99 aa10.02□□□□□ -0.81
XRCC1-208ENST00000598422 C16orf90A8MZG2 172 aa10.02□□□□□ -0.81
XRCC1-208ENST00000598422 B4DEV8 164 aa10.02□□□□□ -0.81
XRCC1-208ENST00000598422 RNASE3P12724 160 aaKnown RBP10.02□□□□□ -0.81
XRCC1-208ENST00000598422 TPT1P13693 172 aaKnown RBP10.02□□□□□ -0.81
XRCC1-208ENST00000598422 LINC00315P59091 139 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms