RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 GTSF1Q8WW33 167 aa10.78□□□□□ -0.68
SHKBP1-211ENST00000595945 C20orf144Q9BQM9 153 aa10.78□□□□□ -0.68
SHKBP1-211ENST00000595945 PYGO2Q9BRQ0 406 aa10.78□□□□□ -0.68
SHKBP1-211ENST00000595945 MUC4Q99102 2169 aa10.77□□□□□ -0.68
SHKBP1-211ENST00000595945 GZMBP10144 247 aa10.77□□□□□ -0.69
SHKBP1-211ENST00000595945 RPL35AP18077 110 aaKnown RBP10.77□□□□□ -0.69
SHKBP1-211ENST00000595945 NUTF2P61970 127 aaKnown RBP10.77□□□□□ -0.69
SHKBP1-211ENST00000595945 TDRG1Q3Y452 100 aa10.77□□□□□ -0.69
SHKBP1-211ENST00000595945 ANXA2RQ3ZCQ2 193 aa10.77□□□□□ -0.69
SHKBP1-211ENST00000595945 DNLZQ5SXM8 178 aa10.77□□□□□ -0.69
SHKBP1-211ENST00000595945 NEU1Q99519 415 aa10.77□□□□□ -0.69
SHKBP1-211ENST00000595945 TRBV24-1A0A075B6N3 115 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 TRAV9-1A0A075B6T8 112 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 TMSB15BA0A087X1C1 80 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 XKRY2A2RUG3 117 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 COLCA2A8K830 154 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 INSP01308 110 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 IGLC6P0CF74 106 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 S100PP25815 95 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 TCL1AP56279 114 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 FAM3BP58499 235 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 KCNIP4Q6PIL6 250 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 LINC00467Q9BRT7 94 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 URGCP-MRPS24S4R325 110 aa10.76□□□□□ -0.69
SHKBP1-211ENST00000595945 IGHV1OR15-1A0A075B7D0 117 aa10.75□□□□□ -0.69
SHKBP1-211ENST00000595945 GRIFINA4D1Z8 144 aa10.75□□□□□ -0.69
SHKBP1-211ENST00000595945 MUC21Q5SSG8 566 aa10.75□□□□□ -0.69
SHKBP1-211ENST00000595945 KPRPQ5T749 579 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-211ENST00000595945 C1orf158Q8N1D5 194 aa10.75□□□□□ -0.69
SHKBP1-211ENST00000595945 CSNK1G2-AS1Q8NCQ2 148 aa10.75□□□□□ -0.69
SHKBP1-211ENST00000595945 NUP35Q8NFH5 326 aa10.75□□□□□ -0.69
SHKBP1-211ENST00000595945 XCL2Q9UBD3 114 aa10.75□□□□□ -0.69
SHKBP1-211ENST00000595945 NAT8BQ9UHF3 227 aa10.75□□□□□ -0.69
SHKBP1-211ENST00000595945 TGIF2-C20orf24A0A0A6YYL0 155 aa10.74□□□□□ -0.69
SHKBP1-211ENST00000595945 HIGD1CA8MV81 97 aa10.74□□□□□ -0.69
SHKBP1-211ENST00000595945 A8MZ25 164 aa10.74□□□□□ -0.69
SHKBP1-211ENST00000595945 KCNS1Q96KK3 526 aa10.74□□□□□ -0.69
SHKBP1-211ENST00000595945 C1QTNF4Q9BXJ3 329 aa10.74□□□□□ -0.69
SHKBP1-211ENST00000595945 CSTL1Q9H114 145 aa10.74□□□□□ -0.69
SHKBP1-211ENST00000595945 NAGKQ9UJ70 344 aa10.74□□□□□ -0.69
SHKBP1-211ENST00000595945 LOC102724200A0A096LPH7 203 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 KIR2DL5BA0A0G2JN68 375 aa10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 KIR2DL5BA0A0G2JPC4 375 aa10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 A0A1W2PPQ1 181 aa10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 TYMSP04818 313 aa10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 IGHV4-30-4P0DP06 118 aa10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 MED14OSP0DP75 135 aa10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 CTRLP40313 264 aa10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 FAM159AQ6UWV7 190 aa10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 KIR2DL5AQ8N109 375 aa10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 TMEM256Q8N2U0 113 aa10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 KIR2DL5BQ8NHK3 375 aa10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 SSBP4Q9BWG4 385 aaPredicted RBP10.73□□□□□ -0.69
SHKBP1-211ENST00000595945 NBEAL2Q6ZNJ1 2754 aa10.72□□□□□ -0.69
SHKBP1-211ENST00000595945 DNHD1Q96M86 4753 aa10.72□□□□□ -0.69
SHKBP1-211ENST00000595945 GNRH2O43555 120 aa10.72□□□□□ -0.69
SHKBP1-211ENST00000595945 SNAI2O43623 268 aa10.72□□□□□ -0.69
SHKBP1-211ENST00000595945 FER1L6-AS1Q8NA97 138 aa10.72□□□□□ -0.69
SHKBP1-211ENST00000595945 BTF3L4Q96K17 158 aa10.72□□□□□ -0.69
SHKBP1-211ENST00000595945 PGLYRP4Q96LB8 373 aa10.72□□□□□ -0.69
SHKBP1-211ENST00000595945 A0A1B0GXF2 115 aa10.71□□□□□ -0.69
SHKBP1-211ENST00000595945 OR5AL1P0C617 328 aa10.71□□□□□ -0.69
SHKBP1-211ENST00000595945 ASIPP42127 132 aa10.71□□□□□ -0.69
SHKBP1-211ENST00000595945 LYZL1Q6UWQ5 148 aa10.71□□□□□ -0.69
SHKBP1-211ENST00000595945 FAM210BQ96KR6 192 aa10.71□□□□□ -0.69
SHKBP1-211ENST00000595945 CNFNQ9BYD5 112 aa10.71□□□□□ -0.69
SHKBP1-211ENST00000595945 SCRT2Q9NQ03 307 aa10.71□□□□□ -0.69
SHKBP1-211ENST00000595945 TP53TG3Q9ULZ0 132 aa10.71□□□□□ -0.69
SHKBP1-211ENST00000595945 TRGV11A0A075B6L2 103 aa10.7□□□□□ -0.7
SHKBP1-211ENST00000595945 IGHV3-16A0A0C4DH30 117 aa10.7□□□□□ -0.7
SHKBP1-211ENST00000595945 RNASE3P12724 160 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-211ENST00000595945 WDR73Q6P4I2 378 aa10.7□□□□□ -0.7
SHKBP1-211ENST00000595945 ZNF705AQ6ZN79 300 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-211ENST00000595945 ATP5L2Q7Z4Y8 100 aa10.7□□□□□ -0.7
SHKBP1-211ENST00000595945 LINC01587Q99440 93 aa10.7□□□□□ -0.7
SHKBP1-211ENST00000595945 A0A1B0GUT8 65 aa10.69□□□□□ -0.7
SHKBP1-211ENST00000595945 F2Z2F3 143 aa10.69□□□□□ -0.7
SHKBP1-211ENST00000595945 H3BVH4 76 aa10.69□□□□□ -0.7
SHKBP1-211ENST00000595945 ARMS2P0C7Q2 107 aa10.69□□□□□ -0.7
SHKBP1-211ENST00000595945 FRMD6-AS1P0C7T7 363 aa10.69□□□□□ -0.7
SHKBP1-211ENST00000595945 RAB5AP20339 215 aa10.69□□□□□ -0.7
SHKBP1-211ENST00000595945 APOC4P55056 127 aa10.69□□□□□ -0.7
SHKBP1-211ENST00000595945 C9orf85Q96MD7 179 aa10.69□□□□□ -0.7
SHKBP1-211ENST00000595945 GOLT1BQ9Y3E0 138 aa10.69□□□□□ -0.7
SHKBP1-211ENST00000595945 IGHV4-4A0A075B6R2 117 aa10.68□□□□□ -0.7
SHKBP1-211ENST00000595945 UBE2CO00762 179 aa10.68□□□□□ -0.7
SHKBP1-211ENST00000595945 SPINK4O60575 86 aa10.68□□□□□ -0.7
SHKBP1-211ENST00000595945 MRPL54Q6P161 138 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-211ENST00000595945 RASL11AQ6T310 242 aa10.68□□□□□ -0.7
SHKBP1-211ENST00000595945 NACAE9PAV3 2078 aa10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 CBY3A6NI87 242 aa10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 NXPH4O95158 308 aa10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 PRM2P04554 102 aa10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 S100A4P26447 101 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 RIGQ13278 110 aa10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 GATD1Q8NB37 220 aa10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 C11orf72Q8NBR9 251 aa10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 OR10AG1Q8NH19 301 aa10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 TMEM208Q9BTX3 173 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms