RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 GFI1BQ5VTD9 330 aa9.59□□□□□ -0.87
SHKBP1-209ENST00000595803 MORN3Q6PF18 240 aaPredicted RBP9.59□□□□□ -0.87
SHKBP1-209ENST00000595803 Q8N1Y9 231 aa9.59□□□□□ -0.87
SHKBP1-209ENST00000595803 TSKUQ8WUA8 353 aa9.59□□□□□ -0.87
SHKBP1-209ENST00000595803 SRD5A3Q9H8P0 318 aa9.59□□□□□ -0.87
SHKBP1-209ENST00000595803 NAGKQ9UJ70 344 aa9.59□□□□□ -0.87
SHKBP1-209ENST00000595803 URGCP-MRPS24S4R325 110 aa9.59□□□□□ -0.87
SHKBP1-209ENST00000595803 SMIM27A0A1W2PRY6 76 aa9.58□□□□□ -0.88
SHKBP1-209ENST00000595803 ZNF324O75467 553 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-209ENST00000595803 FAM3BP58499 235 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-209ENST00000595803 EGFEM1PQ0D2K5 195 aa9.58□□□□□ -0.88
SHKBP1-209ENST00000595803 LINC01559Q495D7 138 aa9.58□□□□□ -0.88
SHKBP1-209ENST00000595803 FAM159AQ6UWV7 190 aa9.58□□□□□ -0.88
SHKBP1-209ENST00000595803 Q6ZQT7 251 aa9.58□□□□□ -0.88
SHKBP1-209ENST00000595803 IGKV3D-20A0A0C4DH25 116 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 GRIFINA4D1Z8 144 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 CRXO43186 299 aaPredicted RBP9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 INSP01308 110 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 GZMBP10144 247 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 TCL1AP56279 114 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 KRTAP10-11P60412 298 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 ANXA2RQ3ZCQ2 193 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 MUC21Q5SSG8 566 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 KCNS1Q96KK3 526 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 C20orf144Q9BQM9 153 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 GFRA4Q9GZZ7 299 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 C11orf21Q9P2W6 132 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 XCL2Q9UBD3 114 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 NAT8BQ9UHF3 227 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 NOTCH3Q9UM47 2321 aa9.57□□□□□ -0.88
SHKBP1-209ENST00000595803 LOC102724200A0A096LPH7 203 aaPredicted RBP9.56□□□□□ -0.88
SHKBP1-209ENST00000595803 FAM231BA6NCW3 169 aa9.56□□□□□ -0.88
SHKBP1-209ENST00000595803 ELOBQ15370 118 aa9.56□□□□□ -0.88
SHKBP1-209ENST00000595803 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
SHKBP1-209ENST00000595803 PGLYRP4Q96LB8 373 aa9.56□□□□□ -0.88
SHKBP1-209ENST00000595803 LINC01587Q99440 93 aa9.56□□□□□ -0.88
SHKBP1-209ENST00000595803 NEU1Q99519 415 aa9.56□□□□□ -0.88
SHKBP1-209ENST00000595803 C1QTNF4Q9BXJ3 329 aa9.56□□□□□ -0.88
SHKBP1-209ENST00000595803 CSTL1Q9H114 145 aa9.56□□□□□ -0.88
SHKBP1-209ENST00000595803 DYNC2H1Q8NCM8 4307 aaKnown RBP9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 TRAV9-1A0A075B6T8 112 aa9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 IGHV1OR15-1A0A075B7D0 117 aa9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 TGIF2-C20orf24A0A0A6YYL0 155 aa9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 A0A1W2PPQ1 181 aa9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 GNRH2O43555 120 aa9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 S100A4P26447 101 aaKnown RBP9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 FOXA3P55318 350 aaPredicted RBP9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 NUP35Q8NFH5 326 aa9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 BORCS7Q96B45 105 aa9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 TMEM208Q9BTX3 173 aa9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 TPPP3Q9BW30 176 aa9.55□□□□□ -0.88
SHKBP1-209ENST00000595803 COLCA2A8K830 154 aa9.54□□□□□ -0.88
SHKBP1-209ENST00000595803 HIGD1CA8MV81 97 aa9.54□□□□□ -0.88
SHKBP1-209ENST00000595803 SPINK4O60575 86 aa9.54□□□□□ -0.88
SHKBP1-209ENST00000595803 CXCL1P09341 107 aa9.54□□□□□ -0.88
SHKBP1-209ENST00000595803 ASIPP42127 132 aa9.54□□□□□ -0.88
SHKBP1-209ENST00000595803 FER1L6-AS1Q8NA97 138 aa9.54□□□□□ -0.88
SHKBP1-209ENST00000595803 GTSF1Q8WW33 167 aa9.54□□□□□ -0.88
SHKBP1-209ENST00000595803 GOLT1BQ9Y3E0 138 aa9.54□□□□□ -0.88
SHKBP1-209ENST00000595803 TRBV24-1A0A075B6N3 115 aa9.53□□□□□ -0.88
SHKBP1-209ENST00000595803 CBY3A6NI87 242 aa9.53□□□□□ -0.88
SHKBP1-209ENST00000595803 HTN1P15515 57 aa9.53□□□□□ -0.88
SHKBP1-209ENST00000595803 APOC4P55056 127 aa9.53□□□□□ -0.88
SHKBP1-209ENST00000595803 TMEM256Q8N2U0 113 aa9.53□□□□□ -0.88
SHKBP1-209ENST00000595803 FAM210BQ96KR6 192 aa9.53□□□□□ -0.88
SHKBP1-209ENST00000595803 YPEL4Q96NS1 127 aa9.53□□□□□ -0.88
SHKBP1-209ENST00000595803 PYGO2Q9BRQ0 406 aa9.53□□□□□ -0.88
SHKBP1-209ENST00000595803 TRGV11A0A075B6L2 103 aa9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 IGHV3OR16-12A0A075B7B8 117 aa9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 F2Z2F3 143 aa9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 TYMSP04818 313 aa9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 GIG44P09565 113 aaPredicted RBP9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 RBMY1A1P0DJD3 496 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 RBMY1CP0DJD4 496 aa9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 IGHV4-30-4P0DP06 118 aa9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 RIGQ13278 110 aa9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 RBMY1FQ15415 496 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 TDRG1Q3Y452 100 aa9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 LYZL1Q6UWQ5 148 aa9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 ZNF575Q86XF7 245 aa9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 C1orf158Q8N1D5 194 aa9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 TIMM8BQ9Y5J9 83 aaPredicted RBP9.52□□□□□ -0.89
SHKBP1-209ENST00000595803 KIR2DL5BA0A0G2JN68 375 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 KIR2DL5BA0A0G2JPC4 375 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 K7EIL1 84 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 ARMS2P0C7Q2 107 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 IGLC6P0CF74 106 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 DNLZQ5SXM8 178 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 MRPL54Q6P161 138 aaKnown RBP9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 KIR2DL5AQ8N109 375 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 KIR2DL5BQ8NHK3 375 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 LINC00467Q9BRT7 94 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 TP53TG3Q9ULZ0 132 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 HYDINQ4G0P3 5121 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 DNAH9Q9NYC9 4486 aa9.51□□□□□ -0.89
SHKBP1-209ENST00000595803 A0A1B0GUT8 65 aa9.5□□□□□ -0.89
SHKBP1-209ENST00000595803 UBE2CO00762 179 aa9.5□□□□□ -0.89
SHKBP1-209ENST00000595803 MED14OSP0DP75 135 aa9.5□□□□□ -0.89
SHKBP1-209ENST00000595803 RAB5AP20339 215 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms