RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 TM2D3Q9BRN9 247 aa7.86□□□□□ -1.15
USE1-204ENST00000594399 OVOL2Q9BRP0 275 aa7.86□□□□□ -1.15
USE1-204ENST00000594399 RNASE7Q9H1E1 156 aaKnown RBP7.86□□□□□ -1.15
USE1-204ENST00000594399 RETNQ9HD89 108 aa7.86□□□□□ -1.15
USE1-204ENST00000594399 C11orf21Q9P2W6 132 aa7.86□□□□□ -1.15
USE1-204ENST00000594399 TRGV11A0A075B6L2 103 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 SMIM9A6NGZ8 99 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 B4DEV8 164 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 ORM1P02763 201 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 RPL19P84098 196 aaKnown RBP7.85□□□□□ -1.15
USE1-204ENST00000594399 RRN3P1Q2M238 152 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 TDRG1Q3Y452 100 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 C15orf54Q8N8G6 183 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 OR11H2Q8NH07 326 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 SFRP2Q96HF1 295 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 NEU1Q99519 415 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 ZMAT4Q9H898 229 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 OSTCQ9NRP0 149 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 X6R8D5 127 aa7.85□□□□□ -1.15
USE1-204ENST00000594399 IGKV3D-20A0A0C4DH25 116 aa7.84□□□□□ -1.15
USE1-204ENST00000594399 TMEM189A5PLL7 270 aa7.84□□□□□ -1.15
USE1-204ENST00000594399 ZNF705GA8MUZ8 300 aaPredicted RBP7.84□□□□□ -1.15
USE1-204ENST00000594399 GATCO43716 136 aaKnown RBP7.84□□□□□ -1.15
USE1-204ENST00000594399 TYMSP04818 313 aa7.84□□□□□ -1.15
USE1-204ENST00000594399 HTN1P15515 57 aa7.84□□□□□ -1.15
USE1-204ENST00000594399 RPS20P60866 119 aaKnown RBP7.84□□□□□ -1.15
USE1-204ENST00000594399 NUDT10Q8NFP7 164 aa7.84□□□□□ -1.15
USE1-204ENST00000594399 OR2D3Q8NGH3 330 aa7.84□□□□□ -1.15
USE1-204ENST00000594399 TMEM263Q8WUH6 116 aaKnown RBP7.84□□□□□ -1.15
USE1-204ENST00000594399 NUDT11Q96G61 164 aa7.84□□□□□ -1.15
USE1-204ENST00000594399 RPP21Q9H633 154 aaKnown RBP7.84□□□□□ -1.15
USE1-204ENST00000594399 TP53TG3Q9ULZ0 132 aa7.84□□□□□ -1.15
USE1-204ENST00000594399 TMSB15BA0A087X1C1 80 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 XKRY2A2RUG3 117 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 PPP1R2P9O14990 202 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 APOC3P02656 99 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 CXCL1P09341 107 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 MIFP14174 115 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 ASIPP42127 132 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 ZNF415Q09FC8 603 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 CT83Q5H943 113 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 SVBPQ8N300 66 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 OR10G8Q8NGN5 311 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 RNASE8Q8TDE3 154 aaKnown RBP7.83□□□□□ -1.16
USE1-204ENST00000594399 C16orf74Q96GX8 76 aa7.83□□□□□ -1.16
USE1-204ENST00000594399 IGHV3-16A0A0C4DH30 117 aa7.82□□□□□ -1.16
USE1-204ENST00000594399 IGHV4-28A0A0C4DH34 117 aa7.82□□□□□ -1.16
USE1-204ENST00000594399 GRIFINA4D1Z8 144 aa7.82□□□□□ -1.16
USE1-204ENST00000594399 MT-ND4LP03901 98 aa7.82□□□□□ -1.16
USE1-204ENST00000594399 PRM2P04554 102 aa7.82□□□□□ -1.16
USE1-204ENST00000594399 S100A4P26447 101 aaKnown RBP7.82□□□□□ -1.16
USE1-204ENST00000594399 ZNF493Q6ZR52 646 aa7.82□□□□□ -1.16
USE1-204ENST00000594399 Q8NAQ8 132 aa7.82□□□□□ -1.16
USE1-204ENST00000594399 CLRN3Q8NCR9 226 aa7.82□□□□□ -1.16
USE1-204ENST00000594399 ANAPC16Q96DE5 110 aa7.82□□□□□ -1.16
USE1-204ENST00000594399 V9GYV3 84 aa7.82□□□□□ -1.16
USE1-204ENST00000594399 SNURFLB1AK76 121 aa7.81□□□□□ -1.16
USE1-204ENST00000594399 GNRH2O43555 120 aa7.81□□□□□ -1.16
USE1-204ENST00000594399 SNAPINO95295 136 aa7.81□□□□□ -1.16
USE1-204ENST00000594399 NHLRC4P0CG21 123 aaPredicted RBP7.81□□□□□ -1.16
USE1-204ENST00000594399 AZU1P20160 251 aa7.81□□□□□ -1.16
USE1-204ENST00000594399 RHEBQ15382 184 aa7.81□□□□□ -1.16
USE1-204ENST00000594399 RNF212Q495C1 297 aa7.81□□□□□ -1.16
USE1-204ENST00000594399 DNLZQ5SXM8 178 aa7.81□□□□□ -1.16
USE1-204ENST00000594399 C11orf72Q8NBR9 251 aa7.81□□□□□ -1.16
USE1-204ENST00000594399 IL17DQ8TAD2 202 aa7.81□□□□□ -1.16
USE1-204ENST00000594399 C11orf68Q9H3H3 251 aaKnown RBP7.81□□□□□ -1.16
USE1-204ENST00000594399 DNAH9Q9NYC9 4486 aa7.8□□□□□ -1.16
USE1-204ENST00000594399 PLAC8L1A1L4L8 177 aa7.8□□□□□ -1.16
USE1-204ENST00000594399 A8MWL6 223 aa7.8□□□□□ -1.16
USE1-204ENST00000594399 H3BVH4 76 aa7.8□□□□□ -1.16
USE1-204ENST00000594399 MED14OSP0DP75 135 aa7.8□□□□□ -1.16
USE1-204ENST00000594399 GZMBP10144 247 aa7.8□□□□□ -1.16
USE1-204ENST00000594399 TCL1AP56279 114 aa7.8□□□□□ -1.16
USE1-204ENST00000594399 GSN-AS1Q9NRJ2 163 aa7.8□□□□□ -1.16
USE1-204ENST00000594399 IL36BQ9NZH7 164 aa7.8□□□□□ -1.16
USE1-204ENST00000594399 MDFICQ9P1T7 246 aa7.8□□□□□ -1.16
USE1-204ENST00000594399 COL7A1Q02388 2944 aa7.8□□□□□ -1.16
USE1-204ENST00000594399 HUWE1Q7Z6Z7 4374 aaKnown RBP7.8□□□□□ -1.16
USE1-204ENST00000594399 A0A1W2PPQ1 181 aa7.79□□□□□ -1.16
USE1-204ENST00000594399 ARMS2P0C7Q2 107 aa7.79□□□□□ -1.16
USE1-204ENST00000594399 RNASE3P12724 160 aaKnown RBP7.79□□□□□ -1.16
USE1-204ENST00000594399 EMP1P54849 157 aa7.79□□□□□ -1.16
USE1-204ENST00000594399 ZNF575Q86XF7 245 aa7.79□□□□□ -1.16
USE1-204ENST00000594399 FER1L6-AS1Q8NA97 138 aa7.79□□□□□ -1.16
USE1-204ENST00000594399 TSKUQ8WUA8 353 aa7.79□□□□□ -1.16
USE1-204ENST00000594399 C9orf85Q96MD7 179 aa7.79□□□□□ -1.16
USE1-204ENST00000594399 SPXQ9BT56 116 aa7.79□□□□□ -1.16
USE1-204ENST00000594399 TPPP3Q9BW30 176 aa7.79□□□□□ -1.16
USE1-204ENST00000594399 GFRA4Q9GZZ7 299 aa7.79□□□□□ -1.16
USE1-204ENST00000594399 TIMM8BQ9Y5J9 83 aaPredicted RBP7.79□□□□□ -1.16
USE1-204ENST00000594399 TENM3Q9P273 2699 aa7.79□□□□□ -1.16
USE1-204ENST00000594399 A0A087WWC5 75 aa7.78□□□□□ -1.16
USE1-204ENST00000594399 C7orf77A4D0Y5 90 aa7.78□□□□□ -1.16
USE1-204ENST00000594399 DEFB4AO15263 64 aa7.78□□□□□ -1.16
USE1-204ENST00000594399 SNAI2O43623 268 aa7.78□□□□□ -1.16
USE1-204ENST00000594399 ATP6V1G1O75348 118 aa7.78□□□□□ -1.16
USE1-204ENST00000594399 OR5AL1P0C617 328 aa7.78□□□□□ -1.16
USE1-204ENST00000594399 IGLC6P0CF74 106 aa7.78□□□□□ -1.16
USE1-204ENST00000594399 CTRLP40313 264 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms