RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, human

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPE-204	ENST00000593827	PAX4	O43316	350 aa		13.98	□□□□□ -0.17
COPE-204	ENST00000593827	BCL2L11	O43521	198 aa		13.98	□□□□□ -0.17
COPE-204	ENST00000593827	PFDN1	O60925	122 aa		13.98	□□□□□ -0.17
COPE-204	ENST00000593827	PFN1	P07737	140 aa	Known RBP	13.98	□□□□□ -0.17
COPE-204	ENST00000593827		Q6ZR54	194 aa		13.98	□□□□□ -0.17
COPE-204	ENST00000593827	SGK494	Q96LW2	274 aa		13.98	□□□□□ -0.17
COPE-204	ENST00000593827	LINC00588	Q9Y4M8	146 aa		13.98	□□□□□ -0.17
COPE-204	ENST00000593827	TRGV4	A0A0C4DH28	118 aa		13.97	□□□□□ -0.17
COPE-204	ENST00000593827	GCG	P01275	180 aa		13.97	□□□□□ -0.17
COPE-204	ENST00000593827	FGF8	P55075	233 aa	Predicted RBP	13.97	□□□□□ -0.17
COPE-204	ENST00000593827	UBE2G2	P60604	165 aa		13.97	□□□□□ -0.17
COPE-204	ENST00000593827	DPPA3	Q6W0C5	159 aa		13.97	□□□□□ -0.17
COPE-204	ENST00000593827	ZNRF2	Q8NHG8	242 aa		13.97	□□□□□ -0.17
COPE-204	ENST00000593827	HHLA3	Q9XRX5	114 aa		13.97	□□□□□ -0.17
COPE-204	ENST00000593827	ICOS	Q9Y6W8	199 aa		13.97	□□□□□ -0.17
COPE-204	ENST00000593827	ARL2-SNX15	V9GYD0	113 aa		13.97	□□□□□ -0.17
COPE-204	ENST00000593827	IGHV3-16	A0A0C4DH30	117 aa		13.96	□□□□□ -0.17
COPE-204	ENST00000593827	FAM74A7	A6NL05	159 aa		13.96	□□□□□ -0.17
COPE-204	ENST00000593827	PEX7	O00628	323 aa		13.96	□□□□□ -0.17
COPE-204	ENST00000593827	IGHV3-53	P01767	116 aa		13.96	□□□□□ -0.17
COPE-204	ENST00000593827	FHIT	P49789	147 aa		13.96	□□□□□ -0.17
COPE-204	ENST00000593827	C1orf134	Q5TEV5	83 aa		13.96	□□□□□ -0.17
COPE-204	ENST00000593827	IGLV2-11	P01706	119 aa		13.95	□□□□□ -0.18
COPE-204	ENST00000593827	TTC32	Q5I0X7	151 aa		13.95	□□□□□ -0.18
COPE-204	ENST00000593827	OR11H4	Q8NGC9	324 aa		13.95	□□□□□ -0.18
COPE-204	ENST00000593827	VSIG2	Q96IQ7	327 aa		13.95	□□□□□ -0.18
COPE-204	ENST00000593827	TRAV4	A0A0B4J268	109 aa		13.94	□□□□□ -0.18
COPE-204	ENST00000593827	NBDY	A0A0U1RRE5	68 aa		13.94	□□□□□ -0.18
COPE-204	ENST00000593827	GNRH2	O43555	120 aa		13.94	□□□□□ -0.18
COPE-204	ENST00000593827	TYMS	P04818	313 aa		13.94	□□□□□ -0.18
COPE-204	ENST00000593827	TPT1	P13693	172 aa	Known RBP	13.94	□□□□□ -0.18
COPE-204	ENST00000593827	MRPL23	Q16540	153 aa	Known RBP	13.94	□□□□□ -0.18
COPE-204	ENST00000593827	EIF5AL1	Q6IS14	154 aa	Known RBP	13.94	□□□□□ -0.18
COPE-204	ENST00000593827	PCNP	Q8WW12	178 aa	Known RBP	13.94	□□□□□ -0.18
COPE-204	ENST00000593827	C8orf49	Q96NF6	230 aa		13.94	□□□□□ -0.18
COPE-204	ENST00000593827	UPK3B	Q9BT76	320 aa		13.94	□□□□□ -0.18
COPE-204	ENST00000593827		A0A096LPF7	62 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827	CIDEA	O60543	219 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827	ORM1	P02763	201 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827	UBE2G1	P62253	170 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827	CST9LP1	Q5W188	147 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827	OR4C5	Q8NGB2	326 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827	FAM213B	Q8TBF2	198 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827	SFT2D1	Q8WV19	159 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827	FMC1	Q96HJ9	113 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827		Q9H8V8	135 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827	ZFP30	Q9Y2G7	519 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827	MRPS16	Q9Y3D3	137 aa	Known RBP	13.93	□□□□□ -0.18
COPE-204	ENST00000593827	DNAH10	Q8IVF4	4471 aa		13.93	□□□□□ -0.18
COPE-204	ENST00000593827	PRSS29P	A6NIE9	313 aa		13.92	□□□□□ -0.18
COPE-204	ENST00000593827	FABP5P3	A8MUU1	101 aa		13.92	□□□□□ -0.18
COPE-204	ENST00000593827	CRYBA4	P53673	196 aa		13.92	□□□□□ -0.18
COPE-204	ENST00000593827	FHL2	Q14192	279 aa		13.92	□□□□□ -0.18
COPE-204	ENST00000593827	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.92	□□□□□ -0.18
COPE-204	ENST00000593827	TMUB2	Q71RG4	321 aa		13.92	□□□□□ -0.18
COPE-204	ENST00000593827	TRAV34	A0A0B4J273	112 aa		13.91	□□□□□ -0.18
COPE-204	ENST00000593827	ESRG	Q1W209	222 aa		13.91	□□□□□ -0.18
COPE-204	ENST00000593827	MBD3L1	Q8WWY6	194 aa		13.91	□□□□□ -0.18
COPE-204	ENST00000593827	RTL8C	O15255	209 aa		13.9	□□□□□ -0.18
COPE-204	ENST00000593827	ZNF80	P51504	273 aa	Predicted RBP	13.9	□□□□□ -0.18
COPE-204	ENST00000593827		Q86TA4	180 aa		13.9	□□□□□ -0.18
COPE-204	ENST00000593827	TCTE3	Q8IZS6	198 aa		13.9	□□□□□ -0.18
COPE-204	ENST00000593827	ZNF479	Q96JC4	524 aa		13.9	□□□□□ -0.18
COPE-204	ENST00000593827	LINC00479	Q96M42	142 aa		13.9	□□□□□ -0.18
COPE-204	ENST00000593827	FRAS1	Q86XX4	4008 aa		13.9	□□□□□ -0.18
COPE-204	ENST00000593827		A0A1W2PPQ1	181 aa		13.89	□□□□□ -0.19
COPE-204	ENST00000593827		C9JCJ5	164 aa		13.89	□□□□□ -0.19
COPE-204	ENST00000593827	TEX46	H3BTG2	121 aa		13.89	□□□□□ -0.19
COPE-204	ENST00000593827	S100A9	P06702	114 aa	Known RBP	13.89	□□□□□ -0.19
COPE-204	ENST00000593827	H2AFB1	P0C5Y9	115 aa		13.89	□□□□□ -0.19
COPE-204	ENST00000593827	S100A4	P26447	101 aa	Known RBP	13.89	□□□□□ -0.19
COPE-204	ENST00000593827	RAB5C	P51148	216 aa		13.89	□□□□□ -0.19
COPE-204	ENST00000593827	ZNF876P	Q49A33	203 aa		13.89	□□□□□ -0.19
COPE-204	ENST00000593827	NEGR1	Q7Z3B1	354 aa		13.89	□□□□□ -0.19
COPE-204	ENST00000593827	SH2D6	Q7Z4S9	175 aa		13.89	□□□□□ -0.19
COPE-204	ENST00000593827	PTH2	Q96A98	100 aa		13.89	□□□□□ -0.19
COPE-204	ENST00000593827	TXNDC17	Q9BRA2	123 aa		13.89	□□□□□ -0.19
COPE-204	ENST00000593827	MUC4	Q99102	2169 aa		13.88	□□□□□ -0.19
COPE-204	ENST00000593827	TRBV6-1	A0A0K0K1D8	114 aa		13.88	□□□□□ -0.19
COPE-204	ENST00000593827	SFTA3	P0C7M3	94 aa		13.88	□□□□□ -0.19
COPE-204	ENST00000593827	BTF3	P20290	206 aa	Known RBP	13.88	□□□□□ -0.19
COPE-204	ENST00000593827	SRI	P30626	198 aa		13.88	□□□□□ -0.19
COPE-204	ENST00000593827	AKR1C3	P42330	323 aa		13.88	□□□□□ -0.19
COPE-204	ENST00000593827	C6orf223	Q8N319	242 aa		13.88	□□□□□ -0.19
COPE-204	ENST00000593827	HERC2	O95714	4834 aa		13.88	□□□□□ -0.19
COPE-204	ENST00000593827	PAGE4	O60829	102 aa		13.87	□□□□□ -0.19
COPE-204	ENST00000593827	ASIP	P42127	132 aa		13.87	□□□□□ -0.19
COPE-204	ENST00000593827	COX8C	Q7Z4L0	72 aa		13.87	□□□□□ -0.19
COPE-204	ENST00000593827	FAM162B	Q5T6X4	162 aa		13.86	□□□□□ -0.19
COPE-204	ENST00000593827	C9orf85	Q96MD7	179 aa		13.86	□□□□□ -0.19
COPE-204	ENST00000593827	C11orf21	Q9P2W6	132 aa		13.86	□□□□□ -0.19
COPE-204	ENST00000593827	GYPE	P15421	78 aa		13.85	□□□□□ -0.19
COPE-204	ENST00000593827	PIK3CD-AS1	Q5SR53	167 aa		13.85	□□□□□ -0.19
COPE-204	ENST00000593827	NACA	E9PAV3	2078 aa		13.84	□□□□□ -0.19
COPE-204	ENST00000593827		B4DEV8	164 aa		13.84	□□□□□ -0.19
COPE-204	ENST00000593827		K7EQD1	137 aa		13.84	□□□□□ -0.19
COPE-204	ENST00000593827	LTA	P01374	205 aa		13.84	□□□□□ -0.19
COPE-204	ENST00000593827	MANBAL	Q9NQG1	85 aa		13.84	□□□□□ -0.19
COPE-204	ENST00000593827	SIVA1	O15304	175 aa		13.83	□□□□□ -0.2
COPE-204	ENST00000593827	C1QB	P02746	253 aa		13.83	□□□□□ -0.2

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