RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 HSPB11Q9Y547 144 aa15.28■□□□□ 0.04
SSBP4-203ENST00000593641 IGHV3-16A0A0C4DH30 117 aa15.27■□□□□ 0.04
SSBP4-203ENST00000593641 IGHV3-38A0A0C4DH36 116 aa15.27■□□□□ 0.04
SSBP4-203ENST00000593641 PGPA6NDG6 321 aa15.27■□□□□ 0.04
SSBP4-203ENST00000593641 GNRH2O43555 120 aa15.27■□□□□ 0.04
SSBP4-203ENST00000593641 PET100P0DJ07 73 aa15.27■□□□□ 0.04
SSBP4-203ENST00000593641 SDF2L1Q9HCN8 221 aa15.27■□□□□ 0.04
SSBP4-203ENST00000593641 LOC100131303A0A0U1RQF7 123 aa15.26■□□□□ 0.03
SSBP4-203ENST00000593641 GOLT1AQ6ZVE7 132 aa15.26■□□□□ 0.03
SSBP4-203ENST00000593641 SMIM3Q9BZL3 60 aa15.26■□□□□ 0.03
SSBP4-203ENST00000593641 MBD2Q9UBB5 411 aa15.26■□□□□ 0.03
SSBP4-203ENST00000593641 MYCBP2O75592 4640 aa15.26■□□□□ 0.03
SSBP4-203ENST00000593641 IGLV5-52A0A0A0MRZ9 124 aa15.25■□□□□ 0.03
SSBP4-203ENST00000593641 F6UZH7 168 aa15.25■□□□□ 0.03
SSBP4-203ENST00000593641 TYMSP04818 313 aa15.25■□□□□ 0.03
SSBP4-203ENST00000593641 TIRAPP58753 221 aa15.25■□□□□ 0.03
SSBP4-203ENST00000593641 KCNS1Q96KK3 526 aa15.25■□□□□ 0.03
SSBP4-203ENST00000593641 TREM1Q9NP99 234 aa15.25■□□□□ 0.03
SSBP4-203ENST00000593641 EIF3GO75821 320 aaKnown RBP eCLIP15.24■□□□□ 0.03
SSBP4-203ENST00000593641 SMR3BP02814 79 aaPredicted RBP15.24■□□□□ 0.03
SSBP4-203ENST00000593641 GATA1P15976 413 aaPredicted RBP15.24■□□□□ 0.03
SSBP4-203ENST00000593641 H2BFSP57053 126 aa15.24■□□□□ 0.03
SSBP4-203ENST00000593641 PQLC2Q6ZP29 291 aa15.24■□□□□ 0.03
SSBP4-203ENST00000593641 BOLA1Q9Y3E2 137 aa15.24■□□□□ 0.03
SSBP4-203ENST00000593641 TRAV8-6A0A0B4J262 113 aa15.23■□□□□ 0.03
SSBP4-203ENST00000593641 A0A1W2PPV4 95 aa15.23■□□□□ 0.03
SSBP4-203ENST00000593641 INMT-MINDY4F8WBC2 141 aa15.23■□□□□ 0.03
SSBP4-203ENST00000593641 ACOT6Q3I5F7 207 aaPredicted RBP15.23■□□□□ 0.03
SSBP4-203ENST00000593641 LINC01556Q5JQF7 62 aa15.23■□□□□ 0.03
SSBP4-203ENST00000593641 ARL6IP6Q8N6S5 226 aa15.23■□□□□ 0.03
SSBP4-203ENST00000593641 NTN5Q8WTR8 489 aaPredicted RBP15.23■□□□□ 0.03
SSBP4-203ENST00000593641 FBLL1A6NHQ2 334 aaKnown RBP15.22■□□□□ 0.03
SSBP4-203ENST00000593641 FAM229AH3BQW9 127 aa15.22■□□□□ 0.03
SSBP4-203ENST00000593641 UPK1BO75841 260 aa15.22■□□□□ 0.03
SSBP4-203ENST00000593641 MPC2O95563 127 aa15.22■□□□□ 0.03
SSBP4-203ENST00000593641 PFN1P07737 140 aaKnown RBP15.22■□□□□ 0.03
SSBP4-203ENST00000593641 RPL12P30050 165 aaKnown RBP15.22■□□□□ 0.03
SSBP4-203ENST00000593641 ASB13Q8WXK3 278 aa15.22■□□□□ 0.03
SSBP4-203ENST00000593641 TRAV8-1A0A0A6YYK1 113 aa15.21■□□□□ 0.03
SSBP4-203ENST00000593641 OR10J3Q5JRS4 329 aa15.21■□□□□ 0.03
SSBP4-203ENST00000593641 PRADC1Q9BSG0 188 aa15.21■□□□□ 0.03
SSBP4-203ENST00000593641 NDFIP1Q9BT67 221 aa15.21■□□□□ 0.03
SSBP4-203ENST00000593641 LRCOL1A6NCL2 159 aa15.2■□□□□ 0.02
SSBP4-203ENST00000593641 IBA57-AS1B1ANH7 110 aa15.2■□□□□ 0.02
SSBP4-203ENST00000593641 SSNA1O43805 119 aa15.2■□□□□ 0.02
SSBP4-203ENST00000593641 HAMPP81172 84 aa15.2■□□□□ 0.02
SSBP4-203ENST00000593641 ZNF876PQ49A33 203 aa15.2■□□□□ 0.02
SSBP4-203ENST00000593641 SLC25A29Q8N8R3 303 aa15.2■□□□□ 0.02
SSBP4-203ENST00000593641 TVP23CQ96ET8 276 aa15.2■□□□□ 0.02
SSBP4-203ENST00000593641 TMEM70Q9BUB7 260 aa15.2■□□□□ 0.02
SSBP4-203ENST00000593641 Q9HAA7 133 aa15.2■□□□□ 0.02
SSBP4-203ENST00000593641 SRRM2Q9UQ35 2752 aaKnown RBP15.2■□□□□ 0.02
SSBP4-203ENST00000593641 CIDEAO60543 219 aa15.19■□□□□ 0.02
SSBP4-203ENST00000593641 GNG5P63218 68 aa15.19■□□□□ 0.02
SSBP4-203ENST00000593641 RHOHQ15669 191 aa15.19■□□□□ 0.02
SSBP4-203ENST00000593641 Q6ZSN1 163 aa15.18■□□□□ 0.02
SSBP4-203ENST00000593641 SERTM2A0A1B0GWG4 89 aa15.17■□□□□ 0.02
SSBP4-203ENST00000593641 RAB2AP61019 212 aa15.17■□□□□ 0.02
SSBP4-203ENST00000593641 Q8N814 137 aa15.17■□□□□ 0.02
SSBP4-203ENST00000593641 TRBV6-4A0A1B0GX49 114 aa15.16■□□□□ 0.02
SSBP4-203ENST00000593641 HMGB3O15347 200 aaKnown RBP15.16■□□□□ 0.02
SSBP4-203ENST00000593641 LELP1Q5T871 98 aa15.16■□□□□ 0.02
SSBP4-203ENST00000593641 CFAP126Q5VTH2 177 aa15.16■□□□□ 0.02
SSBP4-203ENST00000593641 OR10G9Q8NGN4 311 aa15.16■□□□□ 0.02
SSBP4-203ENST00000593641 OR10G7Q8NGN6 311 aa15.16■□□□□ 0.02
SSBP4-203ENST00000593641 SGK494Q96LW2 274 aa15.16■□□□□ 0.02
SSBP4-203ENST00000593641 MARVELD1Q9BSK0 173 aa15.16■□□□□ 0.02
SSBP4-203ENST00000593641 DNAH8Q96JB1 4490 aa15.16■□□□□ 0.02
SSBP4-203ENST00000593641 IGHV3-73A0A0B4J1V6 119 aa15.15■□□□□ 0.02
SSBP4-203ENST00000593641 RS1O15537 224 aa15.15■□□□□ 0.02
SSBP4-203ENST00000593641 IGHV3-30P01768 117 aa15.15■□□□□ 0.02
SSBP4-203ENST00000593641 IGHV3-33P01772 117 aa15.15■□□□□ 0.02
SSBP4-203ENST00000593641 IGHV3-30-3P0DP02 117 aa15.15■□□□□ 0.02
SSBP4-203ENST00000593641 IGHV3-30-5P0DP03 117 aa15.15■□□□□ 0.02
SSBP4-203ENST00000593641 WFDC1Q9HC57 220 aa15.15■□□□□ 0.02
SSBP4-203ENST00000593641 K7EQM0 130 aa15.14■□□□□ 0.01
SSBP4-203ENST00000593641 TAAR5O14804 337 aa15.14■□□□□ 0.01
SSBP4-203ENST00000593641 ARL14EPLP0DKL9 152 aa15.14■□□□□ 0.01
SSBP4-203ENST00000593641 IFITM3Q01628 133 aa15.14■□□□□ 0.01
SSBP4-203ENST00000593641 ZFP69Q49AA0 526 aa15.14■□□□□ 0.01
SSBP4-203ENST00000593641 MGST1P10620 155 aaKnown RBP15.13■□□□□ 0.01
SSBP4-203ENST00000593641 CDC34P49427 236 aaPredicted RBP15.13■□□□□ 0.01
SSBP4-203ENST00000593641 DPPA3Q6W0C5 159 aa15.13■□□□□ 0.01
SSBP4-203ENST00000593641 C5orf17Q8NAS9 161 aa15.13■□□□□ 0.01
SSBP4-203ENST00000593641 GCGP01275 180 aa15.12■□□□□ 0.01
SSBP4-203ENST00000593641 TCRAP04437 139 aa15.12■□□□□ 0.01
SSBP4-203ENST00000593641 ZNF80P51504 273 aaPredicted RBP15.12■□□□□ 0.01
SSBP4-203ENST00000593641 LAGE3Q14657 143 aa15.12■□□□□ 0.01
SSBP4-203ENST00000593641 ATP6V0E2Q8NHE4 81 aa15.12■□□□□ 0.01
SSBP4-203ENST00000593641 TM2D2Q9BX73 214 aa15.12■□□□□ 0.01
SSBP4-203ENST00000593641 GTSF1LQ9H1H1 148 aa15.12■□□□□ 0.01
SSBP4-203ENST00000593641 ZNF506Q5JVG8 444 aa15.11■□□□□ 0.01
SSBP4-203ENST00000593641 C9orf85Q96MD7 179 aa15.11■□□□□ 0.01
SSBP4-203ENST00000593641 C11orf21Q9P2W6 132 aa15.11■□□□□ 0.01
SSBP4-203ENST00000593641 PSG8Q9UQ74 426 aa15.11■□□□□ 0.01
SSBP4-203ENST00000593641 STAG3L2P0CL84 134 aa15.1■□□□□ 0.01
SSBP4-203ENST00000593641 STAG3L3P0CL85 134 aa15.1■□□□□ 0.01
SSBP4-203ENST00000593641 DEFA1P59665 94 aa15.1■□□□□ 0.01
SSBP4-203ENST00000593641 DEFA3P59666 94 aa15.1■□□□□ 0.01
SSBP4-203ENST00000593641 SMUG1Q53HV7 270 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms