RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 NDUFB3O43676 98 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 IGLV2-8P01709 118 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 CCL3P10147 92 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 POLR2JP52435 117 aaKnown RBP4.14□□□□□ -1.75
VMP1-215ENST00000592619 ZNF90Q03938 601 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 GTF3C1Q12789 2109 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 NNATQ16517 81 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 ORMDL2Q53FV1 153 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 CLECL1Q8IZS7 167 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 HIST3H2BBQ8N257 126 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 RNF182Q8N6D2 247 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 OR4A5Q8NH83 315 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 COPS9Q8WXC6 57 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 C16orf95Q9H693 158 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 AP4S1Q9Y587 144 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 ZNF706Q9Y5V0 76 aaPredicted RBP4.14□□□□□ -1.75
VMP1-215ENST00000592619 CROCCQ5TZA2 2017 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 COL6A6A6NMZ7 2263 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 ZFYVE26Q68DK2 2539 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 TRGV10A0A0A0MS01 117 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 TRBV27A0A0K0K1C4 114 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 J3QKU1 62 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 HMGN2P05204 90 aaKnown RBP4.13□□□□□ -1.75
VMP1-215ENST00000592619 CRYGAP11844 174 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 HLA-DRB4P13762 266 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 CCL20P78556 96 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 ATP5G2Q06055 141 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 Q56UQ5 140 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 LINC01545Q5VT33 79 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 Q6ZUT4 128 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 TEN1Q86WV5 123 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 GPHB5Q86YW7 130 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 OR4B1Q8NGF8 309 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 OR4X2Q8NGF9 303 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 OR5D16Q8NGK9 328 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 OR8D4Q8NGM9 314 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 C18orf15Q96N68 181 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 AQP10Q96PS8 301 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 TSSK6Q9BXA6 273 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 TTTY12Q9BZ98 90 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 AGPAT4-IT1Q9H0P7 198 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 ZNF286AQ9HBT8 521 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 ASF1BQ9NVP2 202 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 LINC00312Q9Y6C7 94 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 HLA-DRB4X5D2U9 266 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 NCKAP5O14513 1909 aa4.13□□□□□ -1.75
VMP1-215ENST00000592619 UBR5O95071 2799 aaPredicted RBP4.13□□□□□ -1.75
VMP1-215ENST00000592619 TLN1Q9Y490 2541 aaKnown RBP4.13□□□□□ -1.75
VMP1-215ENST00000592619 TRBV6-6A0A0A6YYG2 114 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 IGHV3-74A0A0B4J1X5 117 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 IGKV1D-43A0A0B4J1Z2 117 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 A0A1W2PP18 115 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 A0A1W2PQD3 144 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 NDUFC2-KCTD14E9PQ53 114 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 PLA2G10O15496 165 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 CPSF4O95639 269 aaKnown RBP4.12□□□□□ -1.75
VMP1-215ENST00000592619 IGKV1-5P01602 117 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 MDKP21741 143 aaPredicted RBP4.12□□□□□ -1.75
VMP1-215ENST00000592619 SRP14P37108 136 aaKnown RBP4.12□□□□□ -1.75
VMP1-215ENST00000592619 ZNF83P51522 516 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 EBI3Q14213 229 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 AADACL3Q5VUY0 350 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 OR10P1Q8NGE3 313 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 OR1J4Q8NGS1 313 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 OR5H2Q8NGV7 314 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 C10orf82Q8WW14 230 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 RAB37Q96AX2 223 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 PROK2Q9HC23 129 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 TP73-AS1Q9UF72 201 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 ATRXP46100 2492 aa4.12□□□□□ -1.75
VMP1-215ENST00000592619 IGLV3-32A0A0A0MS00 114 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 C3orf85A0A1B0GTC6 90 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 C9JCJ5 164 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 H3BQ15 152 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 HMGN4O00479 90 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 MT-ND6P03923 174 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 TCRAP04437 139 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 SEC11BP0C7V7 166 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 ZNF823P16415 610 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 HIST1H2BOP23527 126 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 HIST1H2BBP33778 126 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 UBE2AP49459 152 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 HIST1H2BDP58876 126 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 FGF12P61328 243 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 HIST1H2BCP62807 126 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 HBBP68871 147 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 DEFA5Q01523 94 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 Q0VG73 95 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 IGFBP7Q16270 282 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 HIST2H2BEQ16778 126 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 KHDC3LQ587J8 217 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.11□□□□□ -1.75
VMP1-215ENST00000592619 TMEM91Q6ZNR0 172 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 SCXQ7RTU7 201 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 PCP2Q8IVA1 136 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 LINC00471Q8N535 108 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 Q8N976 141 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 OTOSQ8NHW6 89 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 FAM57AQ8TBR7 257 aa4.11□□□□□ -1.75
VMP1-215ENST00000592619 HIST1H2BHQ93079 126 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms