RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 PGPEP1Q9NXJ5 209 aa13.74□□□□□ -0.21
SPC24-206ENST00000592540 SLC25A16P16260 332 aa13.73□□□□□ -0.21
SPC24-206ENST00000592540 ECSCRQ19T08 205 aa13.73□□□□□ -0.21
SPC24-206ENST00000592540 TIMD4Q96H15 378 aa13.73□□□□□ -0.21
SPC24-206ENST00000592540 RAXQ9Y2V3 346 aa13.73□□□□□ -0.21
SPC24-206ENST00000592540 IGHV3-49A0A0A0MS15 119 aa13.73□□□□□ -0.21
SPC24-206ENST00000592540 OOSP1A8MZH6 123 aa13.73□□□□□ -0.21
SPC24-206ENST00000592540 PRR30Q53SZ7 412 aaPredicted RBP13.73□□□□□ -0.21
SPC24-206ENST00000592540 APOMO95445 188 aa13.72□□□□□ -0.21
SPC24-206ENST00000592540 SUMO2P61956 95 aaKnown RBP13.72□□□□□ -0.21
SPC24-206ENST00000592540 CLEC19AQ6UXS0 136 aa13.72□□□□□ -0.21
SPC24-206ENST00000592540 CCDC140Q96MF4 163 aa13.72□□□□□ -0.21
SPC24-206ENST00000592540 PRR9Q5T870 116 aa13.72□□□□□ -0.21
SPC24-206ENST00000592540 RASL10AQ92737 203 aa13.72□□□□□ -0.21
SPC24-206ENST00000592540 PRADC1Q9BSG0 188 aa13.72□□□□□ -0.21
SPC24-206ENST00000592540 GVINP1Q7Z2Y8 2422 aa13.71□□□□□ -0.21
SPC24-206ENST00000592540 FOXI1Q12951 378 aa13.71□□□□□ -0.21
SPC24-206ENST00000592540 C20orf78Q9BR46 151 aa13.71□□□□□ -0.21
SPC24-206ENST00000592540 MRPL16Q9NX20 251 aaKnown RBP13.71□□□□□ -0.21
SPC24-206ENST00000592540 SCGB2A2Q13296 93 aa13.7□□□□□ -0.22
SPC24-206ENST00000592540 MINOS1Q5TGZ0 78 aa13.7□□□□□ -0.22
SPC24-206ENST00000592540 BAALCQ8WXS3 180 aa13.7□□□□□ -0.22
SPC24-206ENST00000592540 METTL26Q96S19 204 aa13.7□□□□□ -0.22
SPC24-206ENST00000592540 MINOS1-NBL1R4GNA1 71 aa13.7□□□□□ -0.22
SPC24-206ENST00000592540 SMCPP49901 116 aaPredicted RBP13.7□□□□□ -0.22
SPC24-206ENST00000592540 KLK9Q2XQG4 91 aa13.7□□□□□ -0.22
SPC24-206ENST00000592540 CFAP126Q5VTH2 177 aa13.7□□□□□ -0.22
SPC24-206ENST00000592540 C1QTNF4Q9BXJ3 329 aa13.7□□□□□ -0.22
SPC24-206ENST00000592540 KLK9Q9UKQ9 250 aa13.7□□□□□ -0.22
SPC24-206ENST00000592540 ATP6V0E2Q8NHE4 81 aa13.69□□□□□ -0.22
SPC24-206ENST00000592540 DLX4Q92988 240 aaPredicted RBP13.69□□□□□ -0.22
SPC24-206ENST00000592540 RPL39LQ96EH5 51 aaKnown RBP13.69□□□□□ -0.22
SPC24-206ENST00000592540 LINC01549A6NIU2 74 aa13.69□□□□□ -0.22
SPC24-206ENST00000592540 ZNF815PA8K554 130 aa13.69□□□□□ -0.22
SPC24-206ENST00000592540 ATP6V0E1O15342 81 aa13.69□□□□□ -0.22
SPC24-206ENST00000592540 CKS1BP61024 79 aa13.69□□□□□ -0.22
SPC24-206ENST00000592540 TCTEX1D4Q5JR98 221 aa13.69□□□□□ -0.22
SPC24-206ENST00000592540 C2orf66Q6UXQ4 117 aa13.69□□□□□ -0.22
SPC24-206ENST00000592540 C1orf122Q6ZSJ8 110 aa13.69□□□□□ -0.22
SPC24-206ENST00000592540 TMEM238LA0A1B0GVL6 79 aa13.68□□□□□ -0.22
SPC24-206ENST00000592540 PRSS29PA6NIE9 313 aa13.68□□□□□ -0.22
SPC24-206ENST00000592540 A6NJY4 79 aa13.68□□□□□ -0.22
SPC24-206ENST00000592540 M0R381 172 aa13.68□□□□□ -0.22
SPC24-206ENST00000592540 SPRY2O43597 315 aa13.68□□□□□ -0.22
SPC24-206ENST00000592540 GRNP28799 593 aaKnown RBP13.68□□□□□ -0.22
SPC24-206ENST00000592540 VKORC1Q9BQB6 163 aa13.68□□□□□ -0.22
SPC24-206ENST00000592540 ANKHD1Q8IWZ3 2542 aaKnown RBP13.68□□□□□ -0.22
SPC24-206ENST00000592540 IGF1P05019 195 aa13.68□□□□□ -0.22
SPC24-206ENST00000592540 UBE2D1P51668 147 aa13.68□□□□□ -0.22
SPC24-206ENST00000592540 PLEKHB2Q96CS7 222 aa13.68□□□□□ -0.22
SPC24-206ENST00000592540 U3KQE9 123 aa13.68□□□□□ -0.22
SPC24-206ENST00000592540 CENPVL3A0A0U1RRI6 287 aa13.67□□□□□ -0.22
SPC24-206ENST00000592540 SCGB1D4Q6XE38 83 aa13.67□□□□□ -0.22
SPC24-206ENST00000592540 C16orf92Q96LL3 132 aa13.67□□□□□ -0.22
SPC24-206ENST00000592540 DPH3P1Q9H4G8 78 aa13.67□□□□□ -0.22
SPC24-206ENST00000592540 RNF223E7ERA6 249 aa13.67□□□□□ -0.22
SPC24-206ENST00000592540 G3V318 75 aa13.67□□□□□ -0.22
SPC24-206ENST00000592540 J3KRW8 73 aa13.67□□□□□ -0.22
SPC24-206ENST00000592540 COX6B1P14854 86 aa13.67□□□□□ -0.22
SPC24-206ENST00000592540 C14orf178Q8N769 122 aaPredicted RBP13.67□□□□□ -0.22
SPC24-206ENST00000592540 SYT8Q8NBV8 401 aa13.67□□□□□ -0.22
SPC24-206ENST00000592540 SPOCK3Q9BQ16 436 aa13.67□□□□□ -0.22
SPC24-206ENST00000592540 CACNA1BQ00975 2339 aa13.67□□□□□ -0.22
SPC24-206ENST00000592540 TSPAN13O95857 204 aa13.66□□□□□ -0.22
SPC24-206ENST00000592540 SRSF9Q13242 221 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPC24-206ENST00000592540 EEF1AKMT3Q96AZ1 226 aa13.66□□□□□ -0.22
SPC24-206ENST00000592540 FAM90A27PA6NNH2 459 aa13.65□□□□□ -0.22
SPC24-206ENST00000592540 PSMB2P49721 201 aa13.65□□□□□ -0.22
SPC24-206ENST00000592540 NFE4Q86UQ8 179 aa13.65□□□□□ -0.22
SPC24-206ENST00000592540 CDIP1Q9H305 208 aa13.65□□□□□ -0.22
SPC24-206ENST00000592540 LENEPQ9Y5L5 61 aa13.65□□□□□ -0.22
SPC24-206ENST00000592540 LOC107984156A0A0G2JMH3 177 aa13.65□□□□□ -0.22
SPC24-206ENST00000592540 ARL17AQ8IVW1 177 aa13.65□□□□□ -0.22
SPC24-206ENST00000592540 C20orf173Q96LM9 149 aa13.65□□□□□ -0.22
SPC24-206ENST00000592540 SFTA2Q6UW10 78 aa13.64□□□□□ -0.23
SPC24-206ENST00000592540 ZFP2Q6ZN57 461 aa13.64□□□□□ -0.23
SPC24-206ENST00000592540 TRBV7-1A0A0A6YYK4 115 aa13.64□□□□□ -0.23
SPC24-206ENST00000592540 LINC01548A6NM66 108 aa13.64□□□□□ -0.23
SPC24-206ENST00000592540 S100A4P26447 101 aaKnown RBP13.64□□□□□ -0.23
SPC24-206ENST00000592540 ZFP36P26651 326 aaKnown RBP13.64□□□□□ -0.23
SPC24-206ENST00000592540 UBE2D3P61077 147 aa13.64□□□□□ -0.23
SPC24-206ENST00000592540 UBE2D2P62837 147 aa13.64□□□□□ -0.23
SPC24-206ENST00000592540 ITLN2Q8WWU7 325 aaPredicted RBP13.64□□□□□ -0.23
SPC24-206ENST00000592540 MGPP08493 103 aa13.63□□□□□ -0.23
SPC24-206ENST00000592540 ZFAND2AQ8N6M9 145 aa13.63□□□□□ -0.23
SPC24-206ENST00000592540 KLHL30-AS1Q8NEE0 82 aa13.63□□□□□ -0.23
SPC24-206ENST00000592540 PHLDA3Q9Y5J5 127 aa13.63□□□□□ -0.23
SPC24-206ENST00000592540 SVEP1Q4LDE5 3571 aa13.63□□□□□ -0.23
SPC24-206ENST00000592540 CD7P09564 240 aa13.63□□□□□ -0.23
SPC24-206ENST00000592540 C9orf139Q6ZV77 190 aa13.63□□□□□ -0.23
SPC24-206ENST00000592540 TRAV21A0A0B4J279 112 aa13.62□□□□□ -0.23
SPC24-206ENST00000592540 CRYGDP07320 174 aa13.62□□□□□ -0.23
SPC24-206ENST00000592540 ASIPP42127 132 aa13.62□□□□□ -0.23
SPC24-206ENST00000592540 ZNF418Q8TF45 676 aaPredicted RBP13.62□□□□□ -0.23
SPC24-206ENST00000592540 LINC00477Q96M19 166 aa13.62□□□□□ -0.23
SPC24-206ENST00000592540 CLUHP3Q96NS8 147 aa13.62□□□□□ -0.23
SPC24-206ENST00000592540 GLMPQ8WWB7 406 aa13.62□□□□□ -0.23
SPC24-206ENST00000592540 SIRPDQ9H106 197 aa13.62□□□□□ -0.23
SPC24-206ENST00000592540 DUSP14O95147 198 aaKnown RBP13.61□□□□□ -0.23
SPC24-206ENST00000592540 AJUBAQ96IF1 538 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms