RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 SPINK4O60575 86 aa9.77□□□□□ -0.85
CLIP3-205ENST00000592017 IGLV2-11P01706 119 aa9.77□□□□□ -0.85
CLIP3-205ENST00000592017 PPT1P50897 306 aa9.77□□□□□ -0.85
CLIP3-205ENST00000592017 LGALSLQ3ZCW2 172 aaPredicted RBP9.77□□□□□ -0.85
CLIP3-205ENST00000592017 NKX6-2Q9C056 277 aaPredicted RBP9.77□□□□□ -0.85
CLIP3-205ENST00000592017 MDFICQ9P1T7 246 aa9.77□□□□□ -0.85
CLIP3-205ENST00000592017 TRAV26-1A0A087WT03 109 aa9.76□□□□□ -0.85
CLIP3-205ENST00000592017 GCGP01275 180 aa9.76□□□□□ -0.85
CLIP3-205ENST00000592017 IGHV3-53P01767 116 aa9.76□□□□□ -0.85
CLIP3-205ENST00000592017 HOXA5P20719 270 aa9.76□□□□□ -0.85
CLIP3-205ENST00000592017 ZNF80P51504 273 aaPredicted RBP9.76□□□□□ -0.85
CLIP3-205ENST00000592017 SMUG1Q53HV7 270 aa9.76□□□□□ -0.85
CLIP3-205ENST00000592017 DPPA3Q6W0C5 159 aa9.76□□□□□ -0.85
CLIP3-205ENST00000592017 Q86TA4 180 aa9.76□□□□□ -0.85
CLIP3-205ENST00000592017 ARL2-SNX15V9GYD0 113 aa9.76□□□□□ -0.85
CLIP3-205ENST00000592017 DYNC1H1Q14204 4646 aaKnown RBP9.75□□□□□ -0.85
CLIP3-205ENST00000592017 FBLL1A6NHQ2 334 aaKnown RBP9.75□□□□□ -0.85
CLIP3-205ENST00000592017 GNRH2O43555 120 aa9.75□□□□□ -0.85
CLIP3-205ENST00000592017 PAGE4O60829 102 aa9.75□□□□□ -0.85
CLIP3-205ENST00000592017 TYMSP04818 313 aa9.75□□□□□ -0.85
CLIP3-205ENST00000592017 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
CLIP3-205ENST00000592017 MBD3L1Q8WWY6 194 aa9.75□□□□□ -0.85
CLIP3-205ENST00000592017 HIST1H2BAQ96A08 127 aa9.75□□□□□ -0.85
CLIP3-205ENST00000592017 SDF2L1Q9HCN8 221 aa9.75□□□□□ -0.85
CLIP3-205ENST00000592017 KIAA1109Q2LD37 5005 aa9.75□□□□□ -0.85
CLIP3-205ENST00000592017 DNAH11Q96DT5 4516 aa9.74□□□□□ -0.85
CLIP3-205ENST00000592017 M0R2N4 97 aa9.74□□□□□ -0.85
CLIP3-205ENST00000592017 UBE2G1P62253 170 aa9.74□□□□□ -0.85
CLIP3-205ENST00000592017 TDRG1Q3Y452 100 aa9.74□□□□□ -0.85
CLIP3-205ENST00000592017 SAPCD1Q5SSQ6 148 aa9.74□□□□□ -0.85
CLIP3-205ENST00000592017 EIF5AL1Q6IS14 154 aaKnown RBP9.74□□□□□ -0.85
CLIP3-205ENST00000592017 KCNS1Q96KK3 526 aa9.74□□□□□ -0.85
CLIP3-205ENST00000592017 IGHV3-16A0A0C4DH30 117 aa9.73□□□□□ -0.85
CLIP3-205ENST00000592017 PFN1P07737 140 aaKnown RBP9.73□□□□□ -0.85
CLIP3-205ENST00000592017 AKR1C3P42330 323 aa9.73□□□□□ -0.85
CLIP3-205ENST00000592017 LGALS9BQ3B8N2 356 aa9.73□□□□□ -0.85
CLIP3-205ENST00000592017 SPXQ9BT56 116 aa9.73□□□□□ -0.85
CLIP3-205ENST00000592017 IGLV2-18A0A075B6J9 118 aa9.72□□□□□ -0.85
CLIP3-205ENST00000592017 A0A1B0GVG6 124 aa9.72□□□□□ -0.85
CLIP3-205ENST00000592017 SLC51BQ86UW2 128 aa9.72□□□□□ -0.85
CLIP3-205ENST00000592017 FMC1Q96HJ9 113 aa9.72□□□□□ -0.85
CLIP3-205ENST00000592017 C18orf15Q96N68 181 aa9.72□□□□□ -0.85
CLIP3-205ENST00000592017 TCEAL7Q9BRU2 100 aa9.72□□□□□ -0.85
CLIP3-205ENST00000592017 C11orf21Q9P2W6 132 aa9.72□□□□□ -0.85
CLIP3-205ENST00000592017 PKHD1P08F94 4074 aa9.72□□□□□ -0.85
CLIP3-205ENST00000592017 SCO2A0A1W2PP80 73 aa9.71□□□□□ -0.86
CLIP3-205ENST00000592017 RTL8CO15255 209 aa9.71□□□□□ -0.86
CLIP3-205ENST00000592017 RAB5CP51148 216 aa9.71□□□□□ -0.86
CLIP3-205ENST00000592017 RNF212Q495C1 297 aa9.71□□□□□ -0.86
CLIP3-205ENST00000592017 C9orf62Q8N4C0 152 aa9.71□□□□□ -0.86
CLIP3-205ENST00000592017 GNG13Q9P2W3 67 aa9.71□□□□□ -0.86
CLIP3-205ENST00000592017 PKD1P98161 4303 aa9.7□□□□□ -0.86
CLIP3-205ENST00000592017 M0R2P5 195 aa9.7□□□□□ -0.86
CLIP3-205ENST00000592017 SFTA3P0C7M3 94 aa9.7□□□□□ -0.86
CLIP3-205ENST00000592017 SULT1A2P50226 295 aa9.7□□□□□ -0.86
CLIP3-205ENST00000592017 CCL18P55774 89 aa9.7□□□□□ -0.86
CLIP3-205ENST00000592017 Q6ZR54 194 aa9.7□□□□□ -0.86
CLIP3-205ENST00000592017 TRGV4A0A0C4DH28 118 aa9.69□□□□□ -0.86
CLIP3-205ENST00000592017 C9JCJ5 164 aa9.69□□□□□ -0.86
CLIP3-205ENST00000592017 TEX46H3BTG2 121 aa9.69□□□□□ -0.86
CLIP3-205ENST00000592017 CCL20P78556 96 aa9.69□□□□□ -0.86
CLIP3-205ENST00000592017 LINC00336Q6ZUF6 198 aa9.69□□□□□ -0.86
CLIP3-205ENST00000592017 RASL10AQ92737 203 aa9.69□□□□□ -0.86
CLIP3-205ENST00000592017 ZC2HC1AQ96GY0 325 aa9.69□□□□□ -0.86
CLIP3-205ENST00000592017 VSIG2Q96IQ7 327 aa9.69□□□□□ -0.86
CLIP3-205ENST00000592017 ZNF479Q96JC4 524 aa9.69□□□□□ -0.86
CLIP3-205ENST00000592017 MANBALQ9NQG1 85 aa9.69□□□□□ -0.86
CLIP3-205ENST00000592017 ZFP30Q9Y2G7 519 aa9.69□□□□□ -0.86
CLIP3-205ENST00000592017 A0A1B0GVY2 172 aa9.68□□□□□ -0.86
CLIP3-205ENST00000592017 FABP5P3A8MUU1 101 aa9.68□□□□□ -0.86
CLIP3-205ENST00000592017 H3BNG1 76 aa9.68□□□□□ -0.86
CLIP3-205ENST00000592017 M0R036 132 aa9.68□□□□□ -0.86
CLIP3-205ENST00000592017 PAX4O43316 350 aa9.68□□□□□ -0.86
CLIP3-205ENST00000592017 LTAP01374 205 aa9.68□□□□□ -0.86
CLIP3-205ENST00000592017 S100A4P26447 101 aaKnown RBP9.68□□□□□ -0.86
CLIP3-205ENST00000592017 NHLRC2Q8NBF2 726 aa9.68□□□□□ -0.86
CLIP3-205ENST00000592017 LINC00588Q9Y4M8 146 aa9.68□□□□□ -0.86
CLIP3-205ENST00000592017 TRAV4A0A0B4J268 109 aa9.67□□□□□ -0.86
CLIP3-205ENST00000592017 IGKV3D-20A0A0C4DH25 116 aa9.67□□□□□ -0.86
CLIP3-205ENST00000592017 B4DEV8 164 aa9.67□□□□□ -0.86
CLIP3-205ENST00000592017 SH2D1AO60880 128 aa9.67□□□□□ -0.86
CLIP3-205ENST00000592017 ORM1P02763 201 aa9.67□□□□□ -0.86
CLIP3-205ENST00000592017 NKX2-5P52952 324 aaPredicted RBP9.67□□□□□ -0.86
CLIP3-205ENST00000592017 FHL2Q14192 279 aa9.67□□□□□ -0.86
CLIP3-205ENST00000592017 FAM162BQ5T6X4 162 aa9.67□□□□□ -0.86
CLIP3-205ENST00000592017 OR4C5Q8NGB2 326 aa9.67□□□□□ -0.86
CLIP3-205ENST00000592017 PRO0255Q9UI72 69 aa9.67□□□□□ -0.86
CLIP3-205ENST00000592017 A0A096LPF7 62 aa9.66□□□□□ -0.86
CLIP3-205ENST00000592017 TRAV1-1A0A0B4J248 108 aa9.66□□□□□ -0.86
CLIP3-205ENST00000592017 TRBV6-1A0A0K0K1D8 114 aa9.66□□□□□ -0.86
CLIP3-205ENST00000592017 ASIPP42127 132 aa9.66□□□□□ -0.86
CLIP3-205ENST00000592017 CRIP1P50238 77 aa9.66□□□□□ -0.86
CLIP3-205ENST00000592017 CRYBA4P53673 196 aa9.66□□□□□ -0.86
CLIP3-205ENST00000592017 FAM3BP58499 235 aaPredicted RBP9.66□□□□□ -0.86
CLIP3-205ENST00000592017 ZNF876PQ49A33 203 aa9.66□□□□□ -0.86
CLIP3-205ENST00000592017 C9orf85Q96MD7 179 aa9.66□□□□□ -0.86
CLIP3-205ENST00000592017 HHLA3Q9XRX5 114 aa9.66□□□□□ -0.86
CLIP3-205ENST00000592017 ICOSQ9Y6W8 199 aa9.66□□□□□ -0.86
CLIP3-205ENST00000592017 TMSB15BA0A087X1C1 80 aa9.65□□□□□ -0.86
CLIP3-205ENST00000592017 PRSS29PA6NIE9 313 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms