RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 IGLV2-11P01706 119 aa12.49□□□□□ -0.41
CIRBP-227ENST00000590188 TMEM75Q8N9X5 138 aa12.49□□□□□ -0.41
CIRBP-227ENST00000590188 MAP1LC3BQ9GZQ8 125 aa12.49□□□□□ -0.41
CIRBP-227ENST00000590188 SDF2L1Q9HCN8 221 aa12.49□□□□□ -0.41
CIRBP-227ENST00000590188 NBDYA0A0U1RRE5 68 aa12.48□□□□□ -0.41
CIRBP-227ENST00000590188 H3BNG1 76 aa12.48□□□□□ -0.41
CIRBP-227ENST00000590188 FHITP49789 147 aa12.48□□□□□ -0.41
CIRBP-227ENST00000590188 FHL2Q14192 279 aa12.48□□□□□ -0.41
CIRBP-227ENST00000590188 TDRG1Q3Y452 100 aa12.48□□□□□ -0.41
CIRBP-227ENST00000590188 C1orf134Q5TEV5 83 aa12.48□□□□□ -0.41
CIRBP-227ENST00000590188 ZNF479Q96JC4 524 aa12.48□□□□□ -0.41
CIRBP-227ENST00000590188 SPXQ9BT56 116 aa12.48□□□□□ -0.41
CIRBP-227ENST00000590188 ZNF471Q9BX82 626 aaPredicted RBP12.48□□□□□ -0.41
CIRBP-227ENST00000590188 C11orf21Q9P2W6 132 aa12.48□□□□□ -0.41
CIRBP-227ENST00000590188 TRGV4A0A0C4DH28 118 aa12.47□□□□□ -0.41
CIRBP-227ENST00000590188 FAM74A7A6NL05 159 aa12.47□□□□□ -0.41
CIRBP-227ENST00000590188 ZNF345Q14585 488 aa12.47□□□□□ -0.41
CIRBP-227ENST00000590188 ZFP69Q49AA0 526 aa12.47□□□□□ -0.41
CIRBP-227ENST00000590188 SMUG1Q53HV7 270 aa12.47□□□□□ -0.41
CIRBP-227ENST00000590188 Q9H8V8 135 aa12.47□□□□□ -0.41
CIRBP-227ENST00000590188 MUC4Q99102 2169 aa12.46□□□□□ -0.41
CIRBP-227ENST00000590188 A0A1B0GV50 99 aa12.46□□□□□ -0.41
CIRBP-227ENST00000590188 PEX7O00628 323 aa12.46□□□□□ -0.41
CIRBP-227ENST00000590188 CRYBA4P53673 196 aa12.46□□□□□ -0.41
CIRBP-227ENST00000590188 SOHLH1Q5JUK2 328 aa12.46□□□□□ -0.41
CIRBP-227ENST00000590188 KCNS1Q96KK3 526 aa12.46□□□□□ -0.41
CIRBP-227ENST00000590188 PRO0255Q9UI72 69 aa12.46□□□□□ -0.41
CIRBP-227ENST00000590188 HHLA3Q9XRX5 114 aa12.46□□□□□ -0.41
CIRBP-227ENST00000590188 ICOSQ9Y6W8 199 aa12.46□□□□□ -0.41
CIRBP-227ENST00000590188 DYNC1H1Q14204 4646 aaKnown RBP12.46□□□□□ -0.42
CIRBP-227ENST00000590188 A0A1B0GVY2 172 aa12.45□□□□□ -0.42
CIRBP-227ENST00000590188 KANTRA0A1W2PQU2 76 aa12.45□□□□□ -0.42
CIRBP-227ENST00000590188 HMSDA8MTL9 139 aa12.45□□□□□ -0.42
CIRBP-227ENST00000590188 M0R2P5 195 aa12.45□□□□□ -0.42
CIRBP-227ENST00000590188 BCL2L11O43521 198 aa12.45□□□□□ -0.42
CIRBP-227ENST00000590188 RASL10AQ92737 203 aa12.45□□□□□ -0.42
CIRBP-227ENST00000590188 ARL2-SNX15V9GYD0 113 aa12.45□□□□□ -0.42
CIRBP-227ENST00000590188 A0A0D9SG52 128 aa12.44□□□□□ -0.42
CIRBP-227ENST00000590188 C9JCJ5 164 aa12.44□□□□□ -0.42
CIRBP-227ENST00000590188 PFN1P07737 140 aaKnown RBP12.44□□□□□ -0.42
CIRBP-227ENST00000590188 OR4C5Q8NGB2 326 aa12.44□□□□□ -0.42
CIRBP-227ENST00000590188 FAM213BQ8TBF2 198 aa12.44□□□□□ -0.42
CIRBP-227ENST00000590188 MRPS16Q9Y3D3 137 aaKnown RBP12.44□□□□□ -0.42
CIRBP-227ENST00000590188 PPT1P50897 306 aa12.43□□□□□ -0.42
CIRBP-227ENST00000590188 SAPCD1Q5SSQ6 148 aa12.43□□□□□ -0.42
CIRBP-227ENST00000590188 CST9LP1Q5W188 147 aa12.43□□□□□ -0.42
CIRBP-227ENST00000590188 Q86TA4 180 aa12.43□□□□□ -0.42
CIRBP-227ENST00000590188 STOML3Q8TAV4 291 aa12.43□□□□□ -0.42
CIRBP-227ENST00000590188 DNAH11Q96DT5 4516 aa12.42□□□□□ -0.42
CIRBP-227ENST00000590188 TRAV4A0A0B4J268 109 aa12.42□□□□□ -0.42
CIRBP-227ENST00000590188 PFDN1O60925 122 aa12.42□□□□□ -0.42
CIRBP-227ENST00000590188 SEC11BP0C7V7 166 aa12.42□□□□□ -0.42
CIRBP-227ENST00000590188 SLAQ13239 276 aa12.42□□□□□ -0.42
CIRBP-227ENST00000590188 TMUB2Q71RG4 321 aa12.42□□□□□ -0.42
CIRBP-227ENST00000590188 C6orf223Q8N319 242 aa12.42□□□□□ -0.42
CIRBP-227ENST00000590188 KRTAP1-5Q9BYS1 174 aa12.42□□□□□ -0.42
CIRBP-227ENST00000590188 PKD1P98161 4303 aa12.41□□□□□ -0.42
CIRBP-227ENST00000590188 FBLL1A6NHQ2 334 aaKnown RBP12.41□□□□□ -0.42
CIRBP-227ENST00000590188 SFT2D1Q8WV19 159 aa12.41□□□□□ -0.42
CIRBP-227ENST00000590188 HIST1H2BAQ96A08 127 aa12.41□□□□□ -0.42
CIRBP-227ENST00000590188 UPK3BQ9BT76 320 aa12.41□□□□□ -0.42
CIRBP-227ENST00000590188 PAGE4O60829 102 aa12.4□□□□□ -0.42
CIRBP-227ENST00000590188 GYPEP15421 78 aa12.4□□□□□ -0.42
CIRBP-227ENST00000590188 MRPL23Q16540 153 aaKnown RBP12.4□□□□□ -0.42
CIRBP-227ENST00000590188 ZNF876PQ49A33 203 aa12.4□□□□□ -0.42
CIRBP-227ENST00000590188 PCNPQ8WW12 178 aaKnown RBP12.4□□□□□ -0.42
CIRBP-227ENST00000590188 NKX6-2Q9C056 277 aaPredicted RBP12.4□□□□□ -0.42
CIRBP-227ENST00000590188 HERC2O95714 4834 aa12.4□□□□□ -0.43
CIRBP-227ENST00000590188 IGHV3-73A0A0B4J1V6 119 aa12.39□□□□□ -0.43
CIRBP-227ENST00000590188 IGKV3D-20A0A0C4DH25 116 aa12.39□□□□□ -0.43
CIRBP-227ENST00000590188 LOC100131303A0A0U1RQF7 123 aa12.39□□□□□ -0.43
CIRBP-227ENST00000590188 K7EQD1 137 aa12.39□□□□□ -0.43
CIRBP-227ENST00000590188 SRIP30626 198 aa12.39□□□□□ -0.43
CIRBP-227ENST00000590188 UBE2G1P62253 170 aa12.39□□□□□ -0.43
CIRBP-227ENST00000590188 TNP2Q05952 138 aa12.39□□□□□ -0.43
CIRBP-227ENST00000590188 DPPA3Q6W0C5 159 aa12.39□□□□□ -0.43
CIRBP-227ENST00000590188 PGPEP1LA6NFU8 196 aa12.38□□□□□ -0.43
CIRBP-227ENST00000590188 UMAD1C9J7I0 102 aa12.38□□□□□ -0.43
CIRBP-227ENST00000590188 NXPH4O95158 308 aa12.38□□□□□ -0.43
CIRBP-227ENST00000590188 RNASE3P12724 160 aaKnown RBP12.38□□□□□ -0.43
CIRBP-227ENST00000590188 AKR1C3P42330 323 aa12.38□□□□□ -0.43
CIRBP-227ENST00000590188 TTC32Q5I0X7 151 aa12.38□□□□□ -0.43
CIRBP-227ENST00000590188 LYPD5Q6UWN5 251 aa12.38□□□□□ -0.43
CIRBP-227ENST00000590188 NEGR1Q7Z3B1 354 aa12.38□□□□□ -0.43
CIRBP-227ENST00000590188 ZC2HC1AQ96GY0 325 aa12.38□□□□□ -0.43
CIRBP-227ENST00000590188 C9orf85Q96MD7 179 aa12.38□□□□□ -0.43
CIRBP-227ENST00000590188 KIAA1109Q2LD37 5005 aa12.37□□□□□ -0.43
CIRBP-227ENST00000590188 PKHD1P08F94 4074 aa12.37□□□□□ -0.43
CIRBP-227ENST00000590188 FABP5P3A8MUU1 101 aa12.37□□□□□ -0.43
CIRBP-227ENST00000590188 M0R036 132 aa12.37□□□□□ -0.43
CIRBP-227ENST00000590188 ORM1P02763 201 aa12.37□□□□□ -0.43
CIRBP-227ENST00000590188 TPT1P13693 172 aaKnown RBP12.37□□□□□ -0.43
CIRBP-227ENST00000590188 S100A4P26447 101 aaKnown RBP12.37□□□□□ -0.43
CIRBP-227ENST00000590188 EIF5AP63241 154 aaKnown RBP12.37□□□□□ -0.43
CIRBP-227ENST00000590188 ZNF506Q5JVG8 444 aa12.37□□□□□ -0.43
CIRBP-227ENST00000590188 MBD3L1Q8WWY6 194 aa12.37□□□□□ -0.43
CIRBP-227ENST00000590188 SIVA1O15304 175 aa12.36□□□□□ -0.43
CIRBP-227ENST00000590188 SH2D1AO60880 128 aa12.36□□□□□ -0.43
CIRBP-227ENST00000590188 CRIP1P50238 77 aa12.36□□□□□ -0.43
CIRBP-227ENST00000590188 CFAP126Q5VTH2 177 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms