RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 HSD17B11Q8NBQ5 300 aa12.29□□□□□ -0.44
H3F3B-209ENST00000589949 ZNF415Q09FC8 603 aa12.28□□□□□ -0.44
H3F3B-209ENST00000589949 Q6AWC8 147 aa12.28□□□□□ -0.44
H3F3B-209ENST00000589949 TMED6Q8WW62 240 aa12.28□□□□□ -0.44
H3F3B-209ENST00000589949 ZNF479Q96JC4 524 aa12.28□□□□□ -0.44
H3F3B-209ENST00000589949 CSN1S1P47710 185 aa12.27□□□□□ -0.45
H3F3B-209ENST00000589949 TMEM183BQ1AE95 376 aa12.27□□□□□ -0.45
H3F3B-209ENST00000589949 TMEM183AQ8IXX5 376 aa12.27□□□□□ -0.45
H3F3B-209ENST00000589949 TVP23CQ96ET8 276 aa12.27□□□□□ -0.45
H3F3B-209ENST00000589949 PSMG3Q9BT73 122 aaPredicted RBP12.27□□□□□ -0.45
H3F3B-209ENST00000589949 KHDC3LQ587J8 217 aa12.26□□□□□ -0.45
H3F3B-209ENST00000589949 Q8N1X5 172 aa12.26□□□□□ -0.45
H3F3B-209ENST00000589949 OR2G3Q8NGZ4 309 aa12.26□□□□□ -0.45
H3F3B-209ENST00000589949 RASL10AQ92737 203 aa12.26□□□□□ -0.45
H3F3B-209ENST00000589949 GNRH2O43555 120 aa12.25□□□□□ -0.45
H3F3B-209ENST00000589949 SULT1A2P50226 295 aa12.25□□□□□ -0.45
H3F3B-209ENST00000589949 RAB14P61106 215 aa12.25□□□□□ -0.45
H3F3B-209ENST00000589949 SH3BGRL3Q9H299 93 aa12.25□□□□□ -0.45
H3F3B-209ENST00000589949 TRAV8-1A0A0A6YYK1 113 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 PGPA6NDG6 321 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 K7EQD1 137 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 RAB5CP51148 216 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 RAB2AP61019 212 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 SERF2P84101 59 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 MRPL23Q16540 153 aaKnown RBP12.24□□□□□ -0.45
H3F3B-209ENST00000589949 CLLU1Q5K131 121 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 FAM74A1Q5RGS3 127 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 IQCF2Q8IXL9 164 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 OR10G4Q8NGN3 311 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 OTORQ9NRC9 128 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 RPH3ALQ9UNE2 315 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 LENEPQ9Y5L5 61 aa12.24□□□□□ -0.45
H3F3B-209ENST00000589949 TRGV4A0A0C4DH28 118 aa12.23□□□□□ -0.45
H3F3B-209ENST00000589949 UMAD1C9J7I0 102 aa12.23□□□□□ -0.45
H3F3B-209ENST00000589949 HMGB3O15347 200 aaKnown RBP12.23□□□□□ -0.45
H3F3B-209ENST00000589949 SLAQ13239 276 aa12.23□□□□□ -0.45
H3F3B-209ENST00000589949 TDRG1Q3Y452 100 aa12.23□□□□□ -0.45
H3F3B-209ENST00000589949 NEGR1Q7Z3B1 354 aa12.23□□□□□ -0.45
H3F3B-209ENST00000589949 WFDC10BQ8IUB3 73 aa12.23□□□□□ -0.45
H3F3B-209ENST00000589949 SCRT2Q9NQ03 307 aa12.23□□□□□ -0.45
H3F3B-209ENST00000589949 NAGKQ9UJ70 344 aa12.23□□□□□ -0.45
H3F3B-209ENST00000589949 IGHV3-16A0A0C4DH30 117 aa12.22□□□□□ -0.45
H3F3B-209ENST00000589949 LOC100131303A0A0U1RQF7 123 aa12.22□□□□□ -0.45
H3F3B-209ENST00000589949 F6UZH7 168 aa12.22□□□□□ -0.45
H3F3B-209ENST00000589949 GYPEP15421 78 aa12.22□□□□□ -0.45
H3F3B-209ENST00000589949 TAS2R45P59539 299 aa12.22□□□□□ -0.45
H3F3B-209ENST00000589949 GNG5P63218 68 aa12.22□□□□□ -0.45
H3F3B-209ENST00000589949 FAM159AQ6UWV7 190 aa12.22□□□□□ -0.45
H3F3B-209ENST00000589949 GOLT1AQ6ZVE7 132 aa12.22□□□□□ -0.45
H3F3B-209ENST00000589949 SPXQ9BT56 116 aa12.22□□□□□ -0.45
H3F3B-209ENST00000589949 DNAH10OSP0CZ25 163 aa12.21□□□□□ -0.45
H3F3B-209ENST00000589949 AKR1C8PQ5T2L2 129 aa12.21□□□□□ -0.45
H3F3B-209ENST00000589949 TRGV11A0A075B6L2 103 aa12.2□□□□□ -0.46
H3F3B-209ENST00000589949 MBP02144 154 aa12.2□□□□□ -0.46
H3F3B-209ENST00000589949 BLOC1S1P78537 153 aa12.2□□□□□ -0.46
H3F3B-209ENST00000589949 DPPA3Q6W0C5 159 aa12.2□□□□□ -0.46
H3F3B-209ENST00000589949 SGK494Q96LW2 274 aa12.2□□□□□ -0.46
H3F3B-209ENST00000589949 TYMSP04818 313 aa12.19□□□□□ -0.46
H3F3B-209ENST00000589949 SRIP30626 198 aa12.19□□□□□ -0.46
H3F3B-209ENST00000589949 NDUFA5Q16718 116 aa12.19□□□□□ -0.46
H3F3B-209ENST00000589949 ACOT6Q3I5F7 207 aaPredicted RBP12.19□□□□□ -0.46
H3F3B-209ENST00000589949 CMTM2Q8TAZ6 248 aa12.19□□□□□ -0.46
H3F3B-209ENST00000589949 PCNPQ8WW12 178 aaKnown RBP12.19□□□□□ -0.46
H3F3B-209ENST00000589949 C11orf21Q9P2W6 132 aa12.19□□□□□ -0.46
H3F3B-209ENST00000589949 TRAV4A0A0B4J268 109 aa12.18□□□□□ -0.46
H3F3B-209ENST00000589949 M0R2P5 195 aa12.18□□□□□ -0.46
H3F3B-209ENST00000589949 ZNF80P51504 273 aaPredicted RBP12.18□□□□□ -0.46
H3F3B-209ENST00000589949 PQLC2Q6ZP29 291 aa12.18□□□□□ -0.46
H3F3B-209ENST00000589949 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
H3F3B-209ENST00000589949 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
H3F3B-209ENST00000589949 TREM1Q9NP99 234 aa12.18□□□□□ -0.46
H3F3B-209ENST00000589949 LY96Q9Y6Y9 160 aa12.18□□□□□ -0.46
H3F3B-209ENST00000589949 A0A087WTM6 91 aa12.17□□□□□ -0.46
H3F3B-209ENST00000589949 A0A1W2PPV4 95 aa12.17□□□□□ -0.46
H3F3B-209ENST00000589949 LINC00862A6NCI5 91 aa12.17□□□□□ -0.46
H3F3B-209ENST00000589949 ARL14EPLP0DKL9 152 aa12.17□□□□□ -0.46
H3F3B-209ENST00000589949 ARL6IP6Q8N6S5 226 aa12.17□□□□□ -0.46
H3F3B-209ENST00000589949 PGPEP1Q9NXJ5 209 aa12.17□□□□□ -0.46
H3F3B-209ENST00000589949 TRAV21A0A0B4J279 112 aa12.16□□□□□ -0.46
H3F3B-209ENST00000589949 XGP55808 180 aa12.16□□□□□ -0.46
H3F3B-209ENST00000589949 OR4C5Q8NGB2 326 aa12.16□□□□□ -0.46
H3F3B-209ENST00000589949 MSRB1Q9NZV6 116 aa12.16□□□□□ -0.46
H3F3B-209ENST00000589949 IGLV2-11P01706 119 aa12.15□□□□□ -0.46
H3F3B-209ENST00000589949 ORM1P02763 201 aa12.15□□□□□ -0.46
H3F3B-209ENST00000589949 GATA1P15976 413 aaPredicted RBP12.15□□□□□ -0.46
H3F3B-209ENST00000589949 KRTAP10-1P60331 282 aa12.15□□□□□ -0.46
H3F3B-209ENST00000589949 ERVFC1-1P60608 527 aa12.15□□□□□ -0.46
H3F3B-209ENST00000589949 FAM213BQ8TBF2 198 aa12.15□□□□□ -0.46
H3F3B-209ENST00000589949 MED9Q9NWA0 146 aa12.15□□□□□ -0.46
H3F3B-209ENST00000589949 C9JCJ5 164 aa12.14□□□□□ -0.47
H3F3B-209ENST00000589949 STAG3L2P0CL84 134 aa12.14□□□□□ -0.47
H3F3B-209ENST00000589949 STAG3L3P0CL85 134 aa12.14□□□□□ -0.47
H3F3B-209ENST00000589949 FHITP49789 147 aa12.14□□□□□ -0.47
H3F3B-209ENST00000589949 LYPD6BQ8NI32 183 aa12.14□□□□□ -0.47
H3F3B-209ENST00000589949 SUN5Q8TC36 379 aa12.14□□□□□ -0.47
H3F3B-209ENST00000589949 RAB24Q969Q5 203 aa12.14□□□□□ -0.47
H3F3B-209ENST00000589949 ACTR3CQ9C0K3 210 aaPredicted RBP12.14□□□□□ -0.47
H3F3B-209ENST00000589949 SDF2L1Q9HCN8 221 aa12.14□□□□□ -0.47
H3F3B-209ENST00000589949 TCRAP04437 139 aa12.13□□□□□ -0.47
H3F3B-209ENST00000589949 H2AFB1P0C5Y9 115 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms