RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 C6orf223Q8N319 242 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 TMEM75Q8N9X5 138 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 SUN5Q8TC36 379 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 UPK3BQ9BT76 320 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 PRO0255Q9UI72 69 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 A0A1W2PRE2 83 aa7.36□□□□□ -1.23
CLPTM1-211ENST00000589347 M0R2P5 195 aa7.36□□□□□ -1.23
CLPTM1-211ENST00000589347 NKX6-2Q9C056 277 aaPredicted RBP7.36□□□□□ -1.23
CLPTM1-211ENST00000589347 Q9H8V8 135 aa7.36□□□□□ -1.23
CLPTM1-211ENST00000589347 TRAV4A0A0B4J268 109 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 A0A1W2PPQ1 181 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 GGTLC3B5MD39 225 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 GCGP01275 180 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 IFNA7P01567 189 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 ORM1P02763 201 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 TYMSP04818 313 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 SUMO1P63165 101 aaKnown RBP7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 FLI1Q01543 452 aaPredicted RBP7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 ZNF345Q14585 488 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 SMUG1Q53HV7 270 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 Q6ZQT7 251 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 STOML3Q8TAV4 291 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 RASL10AQ92737 203 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 MDFICQ9P1T7 246 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 EPDR1Q9UM22 224 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 PSG8Q9UQ74 426 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 HHLA3Q9XRX5 114 aa7.35□□□□□ -1.23
CLPTM1-211ENST00000589347 A0A096LPF7 62 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 KANTRA0A1W2PQU2 76 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 MAP1LC3B2A6NCE7 125 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 C9JCJ5 164 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 PFN1P07737 140 aaKnown RBP7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 BTF3P20290 206 aaKnown RBP7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 SRIP30626 198 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 CRYBA4P53673 196 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 MRPL23Q16540 153 aaKnown RBP7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 SAPCD1Q5SSQ6 148 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 PRNTQ86SH4 94 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 OR4C5Q8NGB2 326 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 VSIG2Q96IQ7 327 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 C8orf49Q96NF6 230 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 TXNDC17Q9BRA2 123 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 MAP1LC3BQ9GZQ8 125 aa7.34□□□□□ -1.23
CLPTM1-211ENST00000589347 IGHV3-16A0A0C4DH30 117 aa7.33□□□□□ -1.24
CLPTM1-211ENST00000589347 G3V3Q6 166 aa7.33□□□□□ -1.24
CLPTM1-211ENST00000589347 PEX7O00628 323 aa7.33□□□□□ -1.24
CLPTM1-211ENST00000589347 FGF8P55075 233 aaPredicted RBP7.33□□□□□ -1.24
CLPTM1-211ENST00000589347 UBE2G2P60604 165 aa7.33□□□□□ -1.24
CLPTM1-211ENST00000589347 EIF5AP63241 154 aaKnown RBP7.33□□□□□ -1.24
CLPTM1-211ENST00000589347 ESRGQ1W209 222 aa7.33□□□□□ -1.24
CLPTM1-211ENST00000589347 HIST1H2BAQ96A08 127 aa7.33□□□□□ -1.24
CLPTM1-211ENST00000589347 TVP23CQ96ET8 276 aa7.33□□□□□ -1.24
CLPTM1-211ENST00000589347 SGK494Q96LW2 274 aa7.33□□□□□ -1.24
CLPTM1-211ENST00000589347 TCEAL7Q9BRU2 100 aa7.33□□□□□ -1.24
CLPTM1-211ENST00000589347 A0A0D9SG52 128 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 SIVA1O15304 175 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 CIDEAO60543 219 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 SFTA3P0C7M3 94 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 FHL2Q14192 279 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 ZNF726P1Q15940 193 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 NEGR1Q7Z3B1 354 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 SH2D6Q7Z4S9 175 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 Q86TA4 180 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 FMC1Q96HJ9 113 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 ZNF479Q96JC4 524 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 ARL2-SNX15V9GYD0 113 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 LRP1BQ9NZR2 4599 aa7.32□□□□□ -1.24
CLPTM1-211ENST00000589347 FAM74A7A6NL05 159 aa7.31□□□□□ -1.24
CLPTM1-211ENST00000589347 HMSDA8MTL9 139 aa7.31□□□□□ -1.24
CLPTM1-211ENST00000589347 UMAD1C9J7I0 102 aa7.31□□□□□ -1.24
CLPTM1-211ENST00000589347 GNRH2O43555 120 aa7.31□□□□□ -1.24
CLPTM1-211ENST00000589347 PFDN1O60925 122 aa7.31□□□□□ -1.24
CLPTM1-211ENST00000589347 NXPH4O95158 308 aa7.31□□□□□ -1.24
CLPTM1-211ENST00000589347 GYPEP15421 78 aa7.31□□□□□ -1.24
CLPTM1-211ENST00000589347 S100A4P26447 101 aaKnown RBP7.31□□□□□ -1.24
CLPTM1-211ENST00000589347 UBE2G1P62253 170 aa7.31□□□□□ -1.24
CLPTM1-211ENST00000589347 KCNRGQ8N5I3 272 aa7.31□□□□□ -1.24
CLPTM1-211ENST00000589347 ZNF471Q9BX82 626 aaPredicted RBP7.31□□□□□ -1.24
CLPTM1-211ENST00000589347 APOBP04114 4563 aaKnown RBP7.3□□□□□ -1.24
CLPTM1-211ENST00000589347 SMLR1H3BR10 107 aa7.3□□□□□ -1.24
CLPTM1-211ENST00000589347 K7EQD1 137 aa7.3□□□□□ -1.24
CLPTM1-211ENST00000589347 BCL2L11O43521 198 aa7.3□□□□□ -1.24
CLPTM1-211ENST00000589347 IGLV2-11P01706 119 aa7.3□□□□□ -1.24
CLPTM1-211ENST00000589347 SEC11BP0C7V7 166 aa7.3□□□□□ -1.24
CLPTM1-211ENST00000589347 AKR1C3P42330 323 aa7.3□□□□□ -1.24
CLPTM1-211ENST00000589347 ZNF80P51504 273 aaPredicted RBP7.3□□□□□ -1.24
CLPTM1-211ENST00000589347 DPPA3Q6W0C5 159 aa7.3□□□□□ -1.24
CLPTM1-211ENST00000589347 FAM210AQ96ND0 272 aa7.3□□□□□ -1.24
CLPTM1-211ENST00000589347 CYTL1Q9NRR1 136 aa7.3□□□□□ -1.24
CLPTM1-211ENST00000589347 TRAV9-2A0A087WT02 112 aa7.29□□□□□ -1.24
CLPTM1-211ENST00000589347 TRAV34A0A0B4J273 112 aa7.29□□□□□ -1.24
CLPTM1-211ENST00000589347 FABP5P3A8MUU1 101 aa7.29□□□□□ -1.24
CLPTM1-211ENST00000589347 TPT1P13693 172 aaKnown RBP7.29□□□□□ -1.24
CLPTM1-211ENST00000589347 ASIPP42127 132 aa7.29□□□□□ -1.24
CLPTM1-211ENST00000589347 FHITP49789 147 aa7.29□□□□□ -1.24
CLPTM1-211ENST00000589347 TNP2Q05952 138 aa7.29□□□□□ -1.24
CLPTM1-211ENST00000589347 RHOHQ15669 191 aa7.29□□□□□ -1.24
CLPTM1-211ENST00000589347 ZNF876PQ49A33 203 aa7.29□□□□□ -1.24
CLPTM1-211ENST00000589347 CST9LP1Q5W188 147 aa7.29□□□□□ -1.24
CLPTM1-211ENST00000589347 ZNF575Q86XF7 245 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms