RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PSCAO43653 123 aa12.25□□□□□ -0.45
CCDC43-204ENST00000588687 SIX6O95475 246 aa12.25□□□□□ -0.45
CCDC43-204ENST00000588687 WFDC2Q14508 124 aa12.25□□□□□ -0.45
CCDC43-204ENST00000588687 NHLRC2Q8NBF2 726 aa12.25□□□□□ -0.45
CCDC43-204ENST00000588687 CCDC32Q9BV29 185 aa12.25□□□□□ -0.45
CCDC43-204ENST00000588687 EIF3GO75821 320 aaKnown RBP eCLIP12.24□□□□□ -0.45
CCDC43-204ENST00000588687 C1QBP02746 253 aa12.24□□□□□ -0.45
CCDC43-204ENST00000588687 PPT1P50897 306 aa12.24□□□□□ -0.45
CCDC43-204ENST00000588687 KHDC3LQ587J8 217 aa12.24□□□□□ -0.45
CCDC43-204ENST00000588687 SLC25A29Q8N8R3 303 aa12.24□□□□□ -0.45
CCDC43-204ENST00000588687 NMES1Q9C002 83 aa12.24□□□□□ -0.45
CCDC43-204ENST00000588687 Q9HAA7 133 aa12.24□□□□□ -0.45
CCDC43-204ENST00000588687 UBR4Q5T4S7 5183 aa12.23□□□□□ -0.45
CCDC43-204ENST00000588687 TRAV8-1A0A0A6YYK1 113 aa12.23□□□□□ -0.45
CCDC43-204ENST00000588687 F6UZH7 168 aa12.23□□□□□ -0.45
CCDC43-204ENST00000588687 LRRC37A5PQ49AS3 106 aa12.23□□□□□ -0.45
CCDC43-204ENST00000588687 DPPA3Q6W0C5 159 aa12.23□□□□□ -0.45
CCDC43-204ENST00000588687 ATP5SQ99766 215 aa12.23□□□□□ -0.45
CCDC43-204ENST00000588687 OTORQ9NRC9 128 aa12.23□□□□□ -0.45
CCDC43-204ENST00000588687 TRAV21A0A0B4J279 112 aa12.22□□□□□ -0.45
CCDC43-204ENST00000588687 FAM240BA0A1B0GVZ2 78 aa12.22□□□□□ -0.45
CCDC43-204ENST00000588687 FBLL1A6NHQ2 334 aaKnown RBP12.22□□□□□ -0.45
CCDC43-204ENST00000588687 C17orf112F2Z3M2 114 aa12.22□□□□□ -0.45
CCDC43-204ENST00000588687 LAGE3Q14657 143 aa12.22□□□□□ -0.45
CCDC43-204ENST00000588687 FFAR4Q5NUL3 377 aa12.22□□□□□ -0.45
CCDC43-204ENST00000588687 HYLS1Q96M11 299 aa12.22□□□□□ -0.45
CCDC43-204ENST00000588687 PKHD1L1Q86WI1 4243 aa12.22□□□□□ -0.45
CCDC43-204ENST00000588687 LELP1Q5T871 98 aa12.21□□□□□ -0.45
CCDC43-204ENST00000588687 CFAP126Q5VTH2 177 aa12.21□□□□□ -0.45
CCDC43-204ENST00000588687 GOLT1AQ6ZVE7 132 aa12.21□□□□□ -0.45
CCDC43-204ENST00000588687 Q8N3U1 123 aa12.21□□□□□ -0.45
CCDC43-204ENST00000588687 SDF2L1Q9HCN8 221 aa12.21□□□□□ -0.45
CCDC43-204ENST00000588687 C11orf21Q9P2W6 132 aa12.21□□□□□ -0.45
CCDC43-204ENST00000588687 TRBV6-4A0A1B0GX49 114 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 KRTAP29-1A8MX34 341 aaPredicted RBP12.2□□□□□ -0.46
CCDC43-204ENST00000588687 RS1O15537 224 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 IGHV3-30P01768 117 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 IGHV3-33P01772 117 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 PFN1P07737 140 aaKnown RBP12.2□□□□□ -0.46
CCDC43-204ENST00000588687 IGHV3-30-3P0DP02 117 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 IGHV3-30-5P0DP03 117 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 H2BFSP57053 126 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 ASAH1Q13510 395 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 RHOHQ15669 191 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 OR10J3Q5JRS4 329 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 ARL6IP6Q8N6S5 226 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 RPH3ALQ9UNE2 315 aa12.2□□□□□ -0.46
CCDC43-204ENST00000588687 TRAV8-6A0A0B4J262 113 aa12.19□□□□□ -0.46
CCDC43-204ENST00000588687 PGPA6NDG6 321 aa12.19□□□□□ -0.46
CCDC43-204ENST00000588687 J3QL48 77 aa12.19□□□□□ -0.46
CCDC43-204ENST00000588687 LINC00694P0DN24 101 aa12.19□□□□□ -0.46
CCDC43-204ENST00000588687 TAS2R45P59539 299 aa12.19□□□□□ -0.46
CCDC43-204ENST00000588687 ASB13Q8WXK3 278 aa12.19□□□□□ -0.46
CCDC43-204ENST00000588687 TREM1Q9NP99 234 aa12.19□□□□□ -0.46
CCDC43-204ENST00000588687 HSPB11Q9Y547 144 aa12.19□□□□□ -0.46
CCDC43-204ENST00000588687 ZNF80P51504 273 aaPredicted RBP12.18□□□□□ -0.46
CCDC43-204ENST00000588687 GNG5P63218 68 aa12.18□□□□□ -0.46
CCDC43-204ENST00000588687 ZNF876PQ49A33 203 aa12.18□□□□□ -0.46
CCDC43-204ENST00000588687 KCNS1Q96KK3 526 aa12.18□□□□□ -0.46
CCDC43-204ENST00000588687 C9orf85Q96MD7 179 aa12.18□□□□□ -0.46
CCDC43-204ENST00000588687 MBD2Q9UBB5 411 aa12.18□□□□□ -0.46
CCDC43-204ENST00000588687 BOLA1Q9Y3E2 137 aa12.18□□□□□ -0.46
CCDC43-204ENST00000588687 KRTAP10-4P60372 401 aaPredicted RBP12.17□□□□□ -0.46
CCDC43-204ENST00000588687 LINC00528Q8N1L1 170 aa12.17□□□□□ -0.46
CCDC43-204ENST00000588687 CMTM2Q8TAZ6 248 aa12.17□□□□□ -0.46
CCDC43-204ENST00000588687 PPP1R1CQ8WVI7 109 aa12.17□□□□□ -0.46
CCDC43-204ENST00000588687 PRADC1Q9BSG0 188 aa12.17□□□□□ -0.46
CCDC43-204ENST00000588687 CIDEAO60543 219 aa12.16□□□□□ -0.46
CCDC43-204ENST00000588687 GTSF1LQ9H1H1 148 aa12.16□□□□□ -0.46
CCDC43-204ENST00000588687 IGHV3-73A0A0B4J1V6 119 aa12.15□□□□□ -0.46
CCDC43-204ENST00000588687 PLA2G1BP04054 148 aaKnown RBP12.15□□□□□ -0.46
CCDC43-204ENST00000588687 ZNF506Q5JVG8 444 aa12.15□□□□□ -0.46
CCDC43-204ENST00000588687 FAM74A1Q5RGS3 127 aa12.15□□□□□ -0.46
CCDC43-204ENST00000588687 MZT2BQ6NZ67 158 aa12.15□□□□□ -0.46
CCDC43-204ENST00000588687 PQLC2Q6ZP29 291 aa12.15□□□□□ -0.46
CCDC43-204ENST00000588687 TMEM75Q8N9X5 138 aa12.15□□□□□ -0.46
CCDC43-204ENST00000588687 PTH2Q96A98 100 aa12.15□□□□□ -0.46
CCDC43-204ENST00000588687 PGPEP1LA6NFU8 196 aa12.14□□□□□ -0.47
CCDC43-204ENST00000588687 RNASE3P12724 160 aaKnown RBP12.14□□□□□ -0.47
CCDC43-204ENST00000588687 RAB2AP61019 212 aa12.14□□□□□ -0.47
CCDC43-204ENST00000588687 CYCSP99999 105 aaKnown RBP12.14□□□□□ -0.47
CCDC43-204ENST00000588687 ATP6V0E2Q8NHE4 81 aa12.14□□□□□ -0.47
CCDC43-204ENST00000588687 SGK494Q96LW2 274 aa12.14□□□□□ -0.47
CCDC43-204ENST00000588687 SMIM3Q9BZL3 60 aa12.14□□□□□ -0.47
CCDC43-204ENST00000588687 WFDC1Q9HC57 220 aa12.14□□□□□ -0.47
CCDC43-204ENST00000588687 LECT2O14960 151 aa12.13□□□□□ -0.47
CCDC43-204ENST00000588687 MPC2O95563 127 aa12.13□□□□□ -0.47
CCDC43-204ENST00000588687 IGLV2-11P01706 119 aa12.13□□□□□ -0.47
CCDC43-204ENST00000588687 MGST1P10620 155 aaKnown RBP12.13□□□□□ -0.47
CCDC43-204ENST00000588687 TM2D2Q9BX73 214 aa12.13□□□□□ -0.47
CCDC43-204ENST00000588687 SCXQ7RTU7 201 aa12.12□□□□□ -0.47
CCDC43-204ENST00000588687 Q9UF83 564 aa12.12□□□□□ -0.47
CCDC43-204ENST00000588687 HMGB3O15347 200 aaKnown RBP12.11□□□□□ -0.47
CCDC43-204ENST00000588687 TCRAP04437 139 aa12.11□□□□□ -0.47
CCDC43-204ENST00000588687 RPL12P30050 165 aaKnown RBP12.11□□□□□ -0.47
CCDC43-204ENST00000588687 IFITM3Q01628 133 aa12.11□□□□□ -0.47
CCDC43-204ENST00000588687 LINC01620Q4KN68 170 aa12.11□□□□□ -0.47
CCDC43-204ENST00000588687 LINC00299Q6ZSB3 139 aa12.11□□□□□ -0.47
CCDC43-204ENST00000588687 DAZ4Q86SG3 579 aaKnown RBP12.11□□□□□ -0.47
CCDC43-204ENST00000588687 ENKURQ8TC29 256 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms