RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 TMEM183AQ8IXX5 376 aa11.26□□□□□ -0.61
RETREG3-206ENST00000588423 KCNS1Q96KK3 526 aa11.26□□□□□ -0.61
RETREG3-206ENST00000588423 C8orf49Q96NF6 230 aa11.26□□□□□ -0.61
RETREG3-206ENST00000588423 SPXQ9BT56 116 aa11.26□□□□□ -0.61
RETREG3-206ENST00000588423 MDFICQ9P1T7 246 aa11.26□□□□□ -0.61
RETREG3-206ENST00000588423 KMT2AQ03164 3969 aa11.26□□□□□ -0.61
RETREG3-206ENST00000588423 H3BNG1 76 aa11.25□□□□□ -0.61
RETREG3-206ENST00000588423 PFN1P07737 140 aaKnown RBP11.25□□□□□ -0.61
RETREG3-206ENST00000588423 H2AFB1P0C5Y9 115 aa11.25□□□□□ -0.61
RETREG3-206ENST00000588423 LINC00479Q96M42 142 aa11.25□□□□□ -0.61
RETREG3-206ENST00000588423 SDF2L1Q9HCN8 221 aa11.25□□□□□ -0.61
RETREG3-206ENST00000588423 NAGKQ9UJ70 344 aa11.25□□□□□ -0.61
RETREG3-206ENST00000588423 VPS13DQ5THJ4 4388 aa11.25□□□□□ -0.61
RETREG3-206ENST00000588423 GCGP01275 180 aa11.24□□□□□ -0.61
RETREG3-206ENST00000588423 HOXA5P20719 270 aa11.24□□□□□ -0.61
RETREG3-206ENST00000588423 SULT1A2P50226 295 aa11.24□□□□□ -0.61
RETREG3-206ENST00000588423 ZNF80P51504 273 aaPredicted RBP11.24□□□□□ -0.61
RETREG3-206ENST00000588423 OR5I1Q13606 314 aa11.24□□□□□ -0.61
RETREG3-206ENST00000588423 TRAV34A0A0B4J273 112 aa11.23□□□□□ -0.61
RETREG3-206ENST00000588423 IGHV3-16A0A0C4DH30 117 aa11.23□□□□□ -0.61
RETREG3-206ENST00000588423 TRBV6-1A0A0K0K1D8 114 aa11.23□□□□□ -0.61
RETREG3-206ENST00000588423 TYMSP04818 313 aa11.23□□□□□ -0.61
RETREG3-206ENST00000588423 FAM3BP58499 235 aaPredicted RBP11.23□□□□□ -0.61
RETREG3-206ENST00000588423 CST9LP1Q5W188 147 aa11.23□□□□□ -0.61
RETREG3-206ENST00000588423 Q86TA4 180 aa11.23□□□□□ -0.61
RETREG3-206ENST00000588423 UBE2DNLQ8IWF7 75 aa11.23□□□□□ -0.61
RETREG3-206ENST00000588423 RASL10AQ92737 203 aa11.23□□□□□ -0.61
RETREG3-206ENST00000588423 FMC1Q96HJ9 113 aa11.23□□□□□ -0.61
RETREG3-206ENST00000588423 MRPL16Q9NX20 251 aaKnown RBP11.23□□□□□ -0.61
RETREG3-206ENST00000588423 ZFP30Q9Y2G7 519 aa11.23□□□□□ -0.61
RETREG3-206ENST00000588423 TRAV26-1A0A087WT03 109 aa11.22□□□□□ -0.61
RETREG3-206ENST00000588423 GNRH2O43555 120 aa11.22□□□□□ -0.61
RETREG3-206ENST00000588423 PAGE4O60829 102 aa11.22□□□□□ -0.61
RETREG3-206ENST00000588423 NUDT3O95989 172 aa11.22□□□□□ -0.61
RETREG3-206ENST00000588423 COX8CQ7Z4L0 72 aa11.22□□□□□ -0.61
RETREG3-206ENST00000588423 TRAV1-1A0A0B4J248 108 aa11.21□□□□□ -0.61
RETREG3-206ENST00000588423 UBE2G1P62253 170 aa11.21□□□□□ -0.61
RETREG3-206ENST00000588423 TEX261Q6UWH6 196 aa11.21□□□□□ -0.61
RETREG3-206ENST00000588423 ALKAL2Q6UX46 152 aa11.21□□□□□ -0.61
RETREG3-206ENST00000588423 C11orf21Q9P2W6 132 aa11.21□□□□□ -0.61
RETREG3-206ENST00000588423 FABP5P3A8MUU1 101 aa11.2□□□□□ -0.62
RETREG3-206ENST00000588423 M0R2P5 195 aa11.2□□□□□ -0.62
RETREG3-206ENST00000588423 SLAQ13239 276 aa11.2□□□□□ -0.62
RETREG3-206ENST00000588423 DNAH6Q9C0G6 4158 aa11.2□□□□□ -0.62
RETREG3-206ENST00000588423 A0A0J9YY99 117 aa11.19□□□□□ -0.62
RETREG3-206ENST00000588423 A0A1B0GV50 99 aa11.19□□□□□ -0.62
RETREG3-206ENST00000588423 TEX46H3BTG2 121 aa11.19□□□□□ -0.62
RETREG3-206ENST00000588423 S100A9P06702 114 aaKnown RBP11.19□□□□□ -0.62
RETREG3-206ENST00000588423 AKR1C3P42330 323 aa11.19□□□□□ -0.62
RETREG3-206ENST00000588423 MANBALQ9NQG1 85 aa11.19□□□□□ -0.62
RETREG3-206ENST00000588423 LTAP01374 205 aa11.18□□□□□ -0.62
RETREG3-206ENST00000588423 CCL18P55774 89 aa11.18□□□□□ -0.62
RETREG3-206ENST00000588423 VSIG2Q96IQ7 327 aa11.18□□□□□ -0.62
RETREG3-206ENST00000588423 PRO0255Q9UI72 69 aa11.18□□□□□ -0.62
RETREG3-206ENST00000588423 TRAV4A0A0B4J268 109 aa11.17□□□□□ -0.62
RETREG3-206ENST00000588423 FHL2Q14192 279 aa11.17□□□□□ -0.62
RETREG3-206ENST00000588423 PTH2Q96A98 100 aa11.17□□□□□ -0.62
RETREG3-206ENST00000588423 ZC2HC1AQ96GY0 325 aa11.17□□□□□ -0.62
RETREG3-206ENST00000588423 C9orf85Q96MD7 179 aa11.17□□□□□ -0.62
RETREG3-206ENST00000588423 TXNDC17Q9BRA2 123 aa11.17□□□□□ -0.62
RETREG3-206ENST00000588423 IGKV3D-20A0A0C4DH25 116 aa11.16□□□□□ -0.62
RETREG3-206ENST00000588423 SCO2A0A1W2PP80 73 aa11.16□□□□□ -0.62
RETREG3-206ENST00000588423 IGHV3-53P01767 116 aa11.16□□□□□ -0.62
RETREG3-206ENST00000588423 BLOC1S1P78537 153 aa11.16□□□□□ -0.62
RETREG3-206ENST00000588423 CCL20P78556 96 aa11.16□□□□□ -0.62
RETREG3-206ENST00000588423 HHLA3Q9XRX5 114 aa11.16□□□□□ -0.62
RETREG3-206ENST00000588423 PAX4O43316 350 aa11.15□□□□□ -0.62
RETREG3-206ENST00000588423 RNASE3P12724 160 aaKnown RBP11.15□□□□□ -0.62
RETREG3-206ENST00000588423 CRIP1P50238 77 aa11.15□□□□□ -0.62
RETREG3-206ENST00000588423 CRYBA4P53673 196 aa11.15□□□□□ -0.62
RETREG3-206ENST00000588423 IFITM2Q01629 132 aa11.15□□□□□ -0.62
RETREG3-206ENST00000588423 ZNF674Q2M3X9 581 aa11.15□□□□□ -0.62
RETREG3-206ENST00000588423 FAM162BQ5T6X4 162 aa11.15□□□□□ -0.62
RETREG3-206ENST00000588423 ZNF479Q96JC4 524 aa11.15□□□□□ -0.62
RETREG3-206ENST00000588423 GNG13Q9P2W3 67 aa11.15□□□□□ -0.62
RETREG3-206ENST00000588423 LINC00588Q9Y4M8 146 aa11.15□□□□□ -0.62
RETREG3-206ENST00000588423 A0A096LPF7 62 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 TRGV4A0A0C4DH28 118 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 CIDEAO60543 219 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 SFTA3P0C7M3 94 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 PIK3CD-AS1Q5SR53 167 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 DNLZQ5SXM8 178 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 Q6ZR54 194 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 OR4C5Q8NGB2 326 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 ZNRF2Q8NHG8 242 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 LYPD6BQ8NI32 183 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 C11orf52Q96A22 123 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 ICOSQ9Y6W8 199 aa11.14□□□□□ -0.63
RETREG3-206ENST00000588423 EPPK1P58107 5090 aaKnown RBP11.13□□□□□ -0.63
RETREG3-206ENST00000588423 B4DEV8 164 aa11.13□□□□□ -0.63
RETREG3-206ENST00000588423 SH2D1AO60880 128 aa11.13□□□□□ -0.63
RETREG3-206ENST00000588423 ORM1P02763 201 aa11.13□□□□□ -0.63
RETREG3-206ENST00000588423 ASIPP42127 132 aa11.13□□□□□ -0.63
RETREG3-206ENST00000588423 ZNF876PQ49A33 203 aa11.13□□□□□ -0.63
RETREG3-206ENST00000588423 UPK3BQ9BT76 320 aa11.13□□□□□ -0.63
RETREG3-206ENST00000588423 MLST8Q9BVC4 326 aa11.13□□□□□ -0.63
RETREG3-206ENST00000588423 IGLV2-18A0A075B6J9 118 aa11.12□□□□□ -0.63
RETREG3-206ENST00000588423 KRBOX1C9JBD0 128 aa11.12□□□□□ -0.63
RETREG3-206ENST00000588423 IFNA1P01562 189 aa11.12□□□□□ -0.63
RETREG3-206ENST00000588423 S100A4P26447 101 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms