RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 LINC00862A6NCI5 91 aa9.57□□□□□ -0.88
ATG4D-206ENST00000586863 FUSP35637 526 aaKnown RBP eCLIP9.57□□□□□ -0.88
ATG4D-206ENST00000586863 AKR1C8PQ5T2L2 129 aa9.57□□□□□ -0.88
ATG4D-206ENST00000586863 PQLC2Q6ZP29 291 aa9.57□□□□□ -0.88
ATG4D-206ENST00000586863 SLC51BQ86UW2 128 aa9.57□□□□□ -0.88
ATG4D-206ENST00000586863 ZNF471Q9BX82 626 aaPredicted RBP9.57□□□□□ -0.88
ATG4D-206ENST00000586863 ACTR3CQ9C0K3 210 aaPredicted RBP9.57□□□□□ -0.88
ATG4D-206ENST00000586863 MYCBP2O75592 4640 aa9.56□□□□□ -0.88
ATG4D-206ENST00000586863 ZNF138P52744 262 aa9.56□□□□□ -0.88
ATG4D-206ENST00000586863 CRYBA4P53673 196 aa9.56□□□□□ -0.88
ATG4D-206ENST00000586863 FHL2Q14192 279 aa9.56□□□□□ -0.88
ATG4D-206ENST00000586863 C8orf49Q96NF6 230 aa9.56□□□□□ -0.88
ATG4D-206ENST00000586863 CYTL1Q9NRR1 136 aa9.56□□□□□ -0.88
ATG4D-206ENST00000586863 PRO0255Q9UI72 69 aa9.56□□□□□ -0.88
ATG4D-206ENST00000586863 TNFRSF18Q9Y5U5 241 aa9.56□□□□□ -0.88
ATG4D-206ENST00000586863 ZNF415Q09FC8 603 aa9.55□□□□□ -0.88
ATG4D-206ENST00000586863 MUC21Q5SSG8 566 aa9.55□□□□□ -0.88
ATG4D-206ENST00000586863 TRBV7-9A0A0J9YWB2 115 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 HMGB3O15347 200 aaKnown RBP9.54□□□□□ -0.88
ATG4D-206ENST00000586863 SFTA3P0C7M3 94 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 S100A1P23297 94 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 CSN1S1P47710 185 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 FAM74A1Q5RGS3 127 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 LYPD5Q6UWN5 251 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 ALKAL2Q6UX46 152 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 LYPD1Q8N2G4 141 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 STOML3Q8TAV4 291 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 PCNPQ8WW12 178 aaKnown RBP9.54□□□□□ -0.88
ATG4D-206ENST00000586863 RAB24Q969Q5 203 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 FAM210AQ96ND0 272 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 MDFICQ9P1T7 246 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 HHLA3Q9XRX5 114 aa9.54□□□□□ -0.88
ATG4D-206ENST00000586863 CXorf1O96002 111 aa9.53□□□□□ -0.88
ATG4D-206ENST00000586863 STAG3L2P0CL84 134 aa9.53□□□□□ -0.88
ATG4D-206ENST00000586863 STAG3L3P0CL85 134 aa9.53□□□□□ -0.88
ATG4D-206ENST00000586863 TPT1P13693 172 aaKnown RBP9.53□□□□□ -0.88
ATG4D-206ENST00000586863 RANP62826 216 aaKnown RBP9.53□□□□□ -0.88
ATG4D-206ENST00000586863 SLAQ13239 276 aa9.53□□□□□ -0.88
ATG4D-206ENST00000586863 MRPL23Q16540 153 aaKnown RBP9.53□□□□□ -0.88
ATG4D-206ENST00000586863 IQCF2Q8IXL9 164 aa9.53□□□□□ -0.88
ATG4D-206ENST00000586863 FLG2Q5D862 2391 aaPredicted RBP9.52□□□□□ -0.88
ATG4D-206ENST00000586863 CTXND1A0A1B0GTU2 59 aa9.52□□□□□ -0.89
ATG4D-206ENST00000586863 RBAKDNA6NC62 111 aa9.52□□□□□ -0.89
ATG4D-206ENST00000586863 EIF3GO75821 320 aaKnown RBP eCLIP9.52□□□□□ -0.89
ATG4D-206ENST00000586863 SEC11BP0C7V7 166 aa9.52□□□□□ -0.89
ATG4D-206ENST00000586863 DNAH10OSP0CZ25 163 aa9.52□□□□□ -0.89
ATG4D-206ENST00000586863 ARL14EPLP0DKL9 152 aa9.52□□□□□ -0.89
ATG4D-206ENST00000586863 ERVFC1-1P60608 527 aa9.52□□□□□ -0.89
ATG4D-206ENST00000586863 EIF5AL1Q6IS14 154 aaKnown RBP9.52□□□□□ -0.89
ATG4D-206ENST00000586863 NEGR1Q7Z3B1 354 aa9.52□□□□□ -0.89
ATG4D-206ENST00000586863 CMTM2Q8TAZ6 248 aa9.52□□□□□ -0.89
ATG4D-206ENST00000586863 ZNF479Q96JC4 524 aa9.52□□□□□ -0.89
ATG4D-206ENST00000586863 TRGV4A0A0C4DH28 118 aa9.51□□□□□ -0.89
ATG4D-206ENST00000586863 UMAD1C9J7I0 102 aa9.51□□□□□ -0.89
ATG4D-206ENST00000586863 K7EQD1 137 aa9.51□□□□□ -0.89
ATG4D-206ENST00000586863 TMEM183BQ1AE95 376 aa9.51□□□□□ -0.89
ATG4D-206ENST00000586863 Q6AWC8 147 aa9.51□□□□□ -0.89
ATG4D-206ENST00000586863 WFDC10BQ8IUB3 73 aa9.51□□□□□ -0.89
ATG4D-206ENST00000586863 TMEM183AQ8IXX5 376 aa9.51□□□□□ -0.89
ATG4D-206ENST00000586863 TMEM167BQ9NRX6 74 aa9.51□□□□□ -0.89
ATG4D-206ENST00000586863 PGPA6NDG6 321 aa9.5□□□□□ -0.89
ATG4D-206ENST00000586863 DIRC3C9JPN6 131 aa9.5□□□□□ -0.89
ATG4D-206ENST00000586863 GYPEP15421 78 aa9.5□□□□□ -0.89
ATG4D-206ENST00000586863 GCHFRP30047 84 aa9.5□□□□□ -0.89
ATG4D-206ENST00000586863 SRIP30626 198 aa9.5□□□□□ -0.89
ATG4D-206ENST00000586863 RASL10AQ92737 203 aa9.5□□□□□ -0.89
ATG4D-206ENST00000586863 OTORQ9NRC9 128 aa9.5□□□□□ -0.89
ATG4D-206ENST00000586863 MED9Q9NWA0 146 aa9.5□□□□□ -0.89
ATG4D-206ENST00000586863 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
ATG4D-206ENST00000586863 LY96Q9Y6Y9 160 aa9.5□□□□□ -0.89
ATG4D-206ENST00000586863 TRGV11A0A075B6L2 103 aa9.49□□□□□ -0.89
ATG4D-206ENST00000586863 A0A087WTM6 91 aa9.49□□□□□ -0.89
ATG4D-206ENST00000586863 EREGO14944 169 aa9.49□□□□□ -0.89
ATG4D-206ENST00000586863 CDPF1Q6NVV7 123 aa9.49□□□□□ -0.89
ATG4D-206ENST00000586863 NFE4Q86UQ8 179 aa9.49□□□□□ -0.89
ATG4D-206ENST00000586863 COMMD7Q86VX2 200 aa9.49□□□□□ -0.89
ATG4D-206ENST00000586863 NAGKQ9UJ70 344 aa9.49□□□□□ -0.89
ATG4D-206ENST00000586863 MAP1LC3B2A6NCE7 125 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 EPM2AB3EWF7 344 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 XGP55808 180 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 RAB14P61106 215 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 FAM159AQ6UWV7 190 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 DPPA3Q6W0C5 159 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 FAM213BQ8TBF2 198 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 TMED6Q8WW62 240 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 SPXQ9BT56 116 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 MAP1LC3BQ9GZQ8 125 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 RPH3ALQ9UNE2 315 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 LENEPQ9Y5L5 61 aa9.48□□□□□ -0.89
ATG4D-206ENST00000586863 SRRM2Q9UQ35 2752 aaKnown RBP9.47□□□□□ -0.89
ATG4D-206ENST00000586863 TRAV9-2A0A087WT02 112 aa9.47□□□□□ -0.89
ATG4D-206ENST00000586863 TRAV4A0A0B4J268 109 aa9.47□□□□□ -0.89
ATG4D-206ENST00000586863 FGF8P55075 233 aaPredicted RBP9.47□□□□□ -0.89
ATG4D-206ENST00000586863 KRTAP10-1P60331 282 aa9.47□□□□□ -0.89
ATG4D-206ENST00000586863 ZNF726P1Q15940 193 aa9.47□□□□□ -0.89
ATG4D-206ENST00000586863 TDRG1Q3Y452 100 aa9.47□□□□□ -0.89
ATG4D-206ENST00000586863 ARL6IP6Q8N6S5 226 aa9.47□□□□□ -0.89
ATG4D-206ENST00000586863 MSRB1Q9NZV6 116 aa9.47□□□□□ -0.89
ATG4D-206ENST00000586863 IGHV3-16A0A0C4DH30 117 aa9.46□□□□□ -0.9
ATG4D-206ENST00000586863 LOC100131303A0A0U1RQF7 123 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms