RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 ZNF324O75467 553 aaPredicted RBP7.21□□□□□ -1.26
SMCHD1-212ENST00000585229 IGKV3-20P01619 116 aa7.21□□□□□ -1.26
SMCHD1-212ENST00000585229 MT-ND4LP03901 98 aa7.21□□□□□ -1.26
SMCHD1-212ENST00000585229 CXCL1P09341 107 aa7.21□□□□□ -1.26
SMCHD1-212ENST00000585229 NUTF2P61970 127 aaKnown RBP7.21□□□□□ -1.26
SMCHD1-212ENST00000585229 BTN1A1Q13410 526 aa7.21□□□□□ -1.26
SMCHD1-212ENST00000585229 PRR27Q6MZM9 219 aa7.21□□□□□ -1.26
SMCHD1-212ENST00000585229 OR10G8Q8NGN5 311 aa7.21□□□□□ -1.26
SMCHD1-212ENST00000585229 V9GYV3 84 aa7.21□□□□□ -1.26
SMCHD1-212ENST00000585229 KIR2DL5BA0A0G2JN68 375 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 KIR2DL5BA0A0G2JPC4 375 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 GATCO43716 136 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 INSP01308 110 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 P01737 135 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 RBMY1A1P0DJD3 496 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 RBMY1CP0DJD4 496 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 IGHV4-30-4P0DP06 118 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 RNASE4P34096 147 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 ERVFC1-1P60608 527 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 RBMY1FQ15415 496 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 Q6ZQT7 251 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 ZNF575Q86XF7 245 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 KIR2DL5AQ8N109 375 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 C15orf54Q8N8G6 183 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 KIR2DL5BQ8NHK3 375 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 DAZAP1Q96EP5 407 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 LINC00467Q9BRT7 94 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 RPP21Q9H633 154 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 ZMAT4Q9H898 229 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 C11orf21Q9P2W6 132 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 NOTCH1P46531 2555 aa7.2□□□□□ -1.26
SMCHD1-212ENST00000585229 TRAV12-2A0A075B6T6 113 aa7.19□□□□□ -1.26
SMCHD1-212ENST00000585229 LOC102724200A0A096LPH7 203 aaPredicted RBP7.19□□□□□ -1.26
SMCHD1-212ENST00000585229 H7BYZ3 331 aa7.19□□□□□ -1.26
SMCHD1-212ENST00000585229 FXYD7P58549 80 aa7.19□□□□□ -1.26
SMCHD1-212ENST00000585229 TDRG1Q3Y452 100 aa7.19□□□□□ -1.26
SMCHD1-212ENST00000585229 DNLZQ5SXM8 178 aa7.19□□□□□ -1.26
SMCHD1-212ENST00000585229 CSNK1G2-AS1Q8NCQ2 148 aa7.19□□□□□ -1.26
SMCHD1-212ENST00000585229 C1QTNF4Q9BXJ3 329 aa7.19□□□□□ -1.26
SMCHD1-212ENST00000585229 RPS10P5Q9NQ39 176 aa7.19□□□□□ -1.26
SMCHD1-212ENST00000585229 TRAV12-3A0A0B4J271 114 aa7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 IGKV3D-20A0A0C4DH25 116 aa7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 FAM231BA6NCW3 169 aa7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 CXorf65A6NEN9 183 aa7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 ZNF705GA8MUZ8 300 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 A8MWL6 223 aa7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 J3KRW8 73 aa7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 RPL35AP18077 110 aaKnown RBP7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 FOXA3P55318 350 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 RPS20P60866 119 aaKnown RBP7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 TMEM256Q8N2U0 113 aa7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 TSKUQ8WUA8 353 aa7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 IMMP2LQ96T52 175 aa7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 GFRA4Q9GZZ7 299 aa7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 CSTL1Q9H114 145 aa7.18□□□□□ -1.26
SMCHD1-212ENST00000585229 IGHV1OR15-1A0A075B7D0 117 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 SMIM27A0A1W2PRY6 76 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 TMEM189A5PLL7 270 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 UBE2CO00762 179 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 CA1P00915 261 aaPredicted RBP7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 APOC4P55056 127 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 RPL19P84098 196 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 ANXA2RQ3ZCQ2 193 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 C1orf158Q8N1D5 194 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 OR2D3Q8NGH3 330 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 KCNS1Q96KK3 526 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 YPEL4Q96NS1 127 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 PYGO2Q9BRQ0 406 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 TUBA4BQ9H853 241 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 IL36BQ9NZH7 164 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 XCL2Q9UBD3 114 aa7.17□□□□□ -1.26
SMCHD1-212ENST00000585229 XKRY2A2RUG3 117 aa7.16□□□□□ -1.26
SMCHD1-212ENST00000585229 K7EIL1 84 aa7.16□□□□□ -1.26
SMCHD1-212ENST00000585229 ORM1P02763 201 aa7.16□□□□□ -1.26
SMCHD1-212ENST00000585229 IGLC6P0CF74 106 aa7.16□□□□□ -1.26
SMCHD1-212ENST00000585229 ZNF705AQ6ZN79 300 aaPredicted RBP7.16□□□□□ -1.26
SMCHD1-212ENST00000585229 TP53TG3Q9ULZ0 132 aa7.16□□□□□ -1.26
SMCHD1-212ENST00000585229 TRAV9-1A0A075B6T8 112 aa7.15□□□□□ -1.26
SMCHD1-212ENST00000585229 SNAI2O43623 268 aa7.15□□□□□ -1.26
SMCHD1-212ENST00000585229 TYMSP04818 313 aa7.15□□□□□ -1.26
SMCHD1-212ENST00000585229 OR5AL1P0C617 328 aa7.15□□□□□ -1.26
SMCHD1-212ENST00000585229 FAM159AQ6UWV7 190 aa7.15□□□□□ -1.26
SMCHD1-212ENST00000585229 GTSF1Q8WW33 167 aa7.15□□□□□ -1.26
SMCHD1-212ENST00000585229 NEU1Q99519 415 aa7.15□□□□□ -1.26
SMCHD1-212ENST00000585229 SMCO4Q9NRQ5 59 aa7.15□□□□□ -1.26
SMCHD1-212ENST00000585229 GOLT1BQ9Y3E0 138 aa7.15□□□□□ -1.26
SMCHD1-212ENST00000585229 TRGV11A0A075B6L2 103 aa7.14□□□□□ -1.27
SMCHD1-212ENST00000585229 A0A1W2PPQ1 181 aa7.14□□□□□ -1.27
SMCHD1-212ENST00000585229 SCO1O75880 301 aa7.14□□□□□ -1.27
SMCHD1-212ENST00000585229 FRMD6-AS1P0C7T7 363 aa7.14□□□□□ -1.27
SMCHD1-212ENST00000585229 CTRLP40313 264 aa7.14□□□□□ -1.27
SMCHD1-212ENST00000585229 MUC21Q5SSG8 566 aa7.14□□□□□ -1.27
SMCHD1-212ENST00000585229 CBLN2Q8IUK8 224 aa7.14□□□□□ -1.27
SMCHD1-212ENST00000585229 C9orf85Q96MD7 179 aa7.14□□□□□ -1.27
SMCHD1-212ENST00000585229 CNFNQ9BYD5 112 aa7.14□□□□□ -1.27
SMCHD1-212ENST00000585229 SCRT2Q9NQ03 307 aa7.14□□□□□ -1.27
SMCHD1-212ENST00000585229 TRBV24-1A0A075B6N3 115 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 TMSB15BA0A087X1C1 80 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 IGHV3-16A0A0C4DH30 117 aa7.13□□□□□ -1.27
SMCHD1-212ENST00000585229 GRIFINA4D1Z8 144 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms