RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 LAMTOR2Q9Y2Q5 125 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 TNCP24821 2201 aa0.17□□□□□ -2.38
SMCHD1-207ENST00000581711 PRRC2CQ9Y520 2896 aaKnown RBP0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 FER1L6Q2WGJ9 1857 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 AFDNP55196 1824 aaKnown RBP0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 SZT2Q5T011 3432 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 ARL5CA6NH57 179 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 A6NN06 94 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 E7EQ34 232 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 H7BYZ3 331 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 SAA1P0DJI8 122 aaPredicted RBP0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 G0S2P27469 103 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 S100A11P31949 105 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 CAV3P56539 151 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 MAXP61244 160 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 TMEM78Q5T7P6 136 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 C3orf62Q6ZUJ4 267 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 LINC00305Q7Z4B0 112 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 STX12Q86Y82 276 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 CLEC2BQ92478 149 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 CIB3Q96Q77 187 aaPredicted RBP0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 PCBD2Q9H0N5 130 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 LPAR5Q9H1C0 372 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 ATPIF1Q9UII2 106 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 USP54Q70EL1 1684 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 CTTNBP2Q8WZ74 1663 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 PCNX1Q96RV3 2341 aa0.16□□□□□ -2.38
SMCHD1-207ENST00000581711 DSPPQ9NZW4 1301 aa0.15□□□□□ -2.38
SMCHD1-207ENST00000581711 DLC1Q96QB1 1528 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 TRAV13-1A0A0B4J241 112 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 LOC107984156A0A0G2JMH3 177 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 TRBV27A0A0K0K1C4 114 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 LOC107986453A0A1B0GWG9 222 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 A0A1W2PPB8 328 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 A0A1W2PRS3 328 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 BBIP1A8MTZ0 92 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 KIR3DP1A8MWS1 328 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 FAM107AO95990 144 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 GYPBP06028 91 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 RPS3P23396 243 aaKnown RBP eCLIP0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 DNAJB13P59910 316 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 SNRPD3P62318 126 aaKnown RBP0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 QRFPP83859 136 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 SPINK13Q1W4C9 94 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 CCSMST1Q4G0I0 132 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 XAF1Q6GPH4 301 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 C10orf99Q6UWK7 81 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 IZUMO2Q6UXV1 221 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 ARL17AQ8IVW1 177 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 TEX29Q8N6K0 151 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 TCTEX1D1Q8N7M0 179 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 TMEM229BQ8NBD8 167 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 LXNQ9BS40 222 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 FAM103A1Q9BTL3 118 aaKnown RBP0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 FKBP11Q9NYL4 201 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 MPC1Q9Y5U8 109 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 V9GYQ6 96 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 DNAH12Q6ZR08 3092 aa0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 TCOF1Q13428 1488 aaKnown RBP0.15□□□□□ -2.39
SMCHD1-207ENST00000581711 MAP1AP78559 2803 aaPredicted RBP0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 FGD6Q6ZV73 1430 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 CFAP47Q6ZTR5 3102 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 WDR87Q6ZQQ6 2873 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 A0A1B0GV72 72 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 A0A1W2PRE2 83 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 PRORSD1PA6NEY8 169 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 H3BMG7 143 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 EVI2AP22794 236 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 SRP9P49458 86 aaKnown RBP0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 GTF2A1P52655 376 aaPredicted RBP0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 LSM3P62310 102 aaKnown RBP0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 CSAG1Q6PB30 78 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 MORN4Q8NDC4 146 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 TSKUQ8WUA8 353 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 THEM6Q8WUY1 208 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 NABP2Q9BQ15 211 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 C19orf12Q9NSK7 152 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 MED31Q9Y3C7 131 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 ESPL1Q14674 2120 aa0.14□□□□□ -2.39
SMCHD1-207ENST00000581711 TRBV7-6A0A0J9YX20 115 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 TMEM30CPA0ZSE6 113 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 TMEM189A5PLL7 270 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 IFITM5A6NNB3 132 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 EDF1O60869 148 aaKnown RBP0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 LY6G6CO95867 125 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 IFNA21P01568 189 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 FABP1P07148 127 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 NEFHP12036 1026 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 SLC25A4P12235 298 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 CRYGSP22914 178 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 S100A5P33763 92 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 ETV6P41212 452 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 BLCAPP62952 87 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 GLYATL3Q5SZD4 288 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 HRCT1Q6UXD1 115 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 OR8J3Q8NGG0 315 aa0.13□□□□□ -2.39
SMCHD1-207ENST00000581711 OR51A4Q8NGJ6 313 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms