RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 SLPIP03973 132 aa4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 GPX1P07203 203 aa4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 PFN1P07737 140 aaKnown RBP4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 CDC34P49427 236 aaPredicted RBP4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 CIRBPQ14011 172 aaKnown RBP4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 SCGB2B2Q4G0G5 96 aa4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 SLC25A29Q8N8R3 303 aa4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 C9orf163Q8N9P6 203 aa4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 ARL6Q9H0F7 186 aa4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 GTSF1LQ9H1H1 148 aa4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 NAGKQ9UJ70 344 aa4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 RAB26Q9ULW5 256 aa4.84□□□□□ -1.63
SMARCE1-217ENST00000580654 TRAV8-1A0A0A6YYK1 113 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 A0A0B4J2A0 478 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 GGTLC3B5MD39 225 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 PHOX2AO14813 284 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 RPS19P39019 145 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 NEDD8Q15843 81 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 RNF151Q2KHN1 245 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 C6orf226Q5I0X4 101 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 FFAR4Q5NUL3 377 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 MUC21Q5SSG8 566 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 FAAP20Q6NZ36 180 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 SDIM1Q6ZPB5 146 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 LINC00305Q7Z4B0 112 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 BPIFA4PQ86YQ2 179 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 LINC00477Q96M19 166 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 COMMD3Q9UBI1 195 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 SHPKQ9UHJ6 478 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 FLVCR2Q9UPI3 526 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 C14orf166Q9Y224 244 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 KIF25-AS1Q9Y6Z4 181 aa4.83□□□□□ -1.64
SMARCE1-217ENST00000580654 FBLL1A6NHQ2 334 aaKnown RBP4.82□□□□□ -1.64
SMARCE1-217ENST00000580654 NMBP08949 121 aa4.82□□□□□ -1.64
SMARCE1-217ENST00000580654 AKR1C4P17516 323 aa4.82□□□□□ -1.64
SMARCE1-217ENST00000580654 TBPP20226 339 aa4.82□□□□□ -1.64
SMARCE1-217ENST00000580654 UBE2G2P60604 165 aa4.82□□□□□ -1.64
SMARCE1-217ENST00000580654 LSM3P62310 102 aaKnown RBP4.82□□□□□ -1.64
SMARCE1-217ENST00000580654 FAM122CQ6P4D5 195 aa4.82□□□□□ -1.64
SMARCE1-217ENST00000580654 ATRAIDQ6UW56 229 aa4.82□□□□□ -1.64
SMARCE1-217ENST00000580654 OR52I2Q8NH67 350 aa4.82□□□□□ -1.64
SMARCE1-217ENST00000580654 RMI2Q96E14 147 aa4.82□□□□□ -1.64
SMARCE1-217ENST00000580654 Q9H521 79 aa4.82□□□□□ -1.64
SMARCE1-217ENST00000580654 H3BP45 60 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 K7EPK0 472 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 RAB3DO95716 219 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 PRSS1P07477 247 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 UBE2MP61081 183 aaKnown RBP4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 SELENOTP62341 195 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 SLC38A11Q08AI6 406 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 TMEM183BQ1AE95 376 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 GAGE13Q4V321 117 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 SPANXN5Q5MJ07 72 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 TMEM183AQ8IXX5 376 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 TMEM229BQ8NBD8 167 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 MRPL53Q96EL3 112 aaKnown RBP4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 MTFP1Q9UDX5 166 aa4.81□□□□□ -1.64
SMARCE1-217ENST00000580654 IGKV2-40A0A087WW87 121 aaPredicted RBP4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 A0A087WYN8 130 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 LOC105371267A0A1B0GV96 52 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 FABP12A6NFH5 140 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 FAM25AB3EWG3 89 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 FAM25CB3EWG5 89 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 FAM25GB3EWG6 89 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 ZNF253O75346 499 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 NDUFB4O95168 129 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 IGKV2D-40P01614 121 aaPredicted RBP4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 LINC00694P0DN24 101 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 SURF2Q15527 256 aaPredicted RBP4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 C14orf177Q52M58 125 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 DPPA3Q6W0C5 159 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 NIT1Q86X76 327 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 SRRQ9GZT4 340 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 ZNF492Q9P255 531 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 KLK12Q9UKR0 248 aa4.8□□□□□ -1.64
SMARCE1-217ENST00000580654 TRBV6-4A0A1B0GX49 114 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 M0R2P5 195 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 GATCO43716 136 aaKnown RBP4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 SYNGR2O43760 224 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 HPGDSO60760 199 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 CHTF8P0CG12 524 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 RAB4AP20338 218 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 TAS2R19P59542 299 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 SNRPEP62304 92 aaKnown RBP4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 PRR3P79522 188 aaKnown RBP4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 RHOHQ15669 191 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 GUK1Q16774 197 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 PXDC1Q5TGL8 231 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 S100A7AQ86SG5 101 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 EXOC3-AS1Q8N2X6 119 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 OR51S1Q8NGJ8 323 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 Q8TAT8 98 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 UBE2WQ96B02 151 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 ZC2HC1AQ96GY0 325 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 PRADC1Q9BSG0 188 aa4.79□□□□□ -1.64
SMARCE1-217ENST00000580654 TRBV19A0A075B6N1 114 aa4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 IGHV3-73A0A0B4J1V6 119 aa4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 GNRH2O43555 120 aa4.78□□□□□ -1.64
SMARCE1-217ENST00000580654 OR10J4P0C629 311 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms