RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 C8orf49Q96NF6 230 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 TMSB15BA0A087X1C1 80 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 H3BUA1 57 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 CT45A10P0DMU9 189 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 HBBP68871 147 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 RNF151Q2KHN1 245 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 KHDC1LQ5JSQ8 128 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 RASL11AQ6T310 242 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP3-217ENST00000580287 A0A0G2JLM5 398 aa9.68□□□□□ -0.86
CDK5RAP3-217ENST00000580287 RBPMS2Q6ZRY4 209 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP3-217ENST00000580287 A0A1B0GXF2 115 aa9.68□□□□□ -0.86
CDK5RAP3-217ENST00000580287 CSN3P07498 182 aa9.68□□□□□ -0.86
CDK5RAP3-217ENST00000580287 RNASE1P07998 156 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP3-217ENST00000580287 LINC01006Q8NI28 216 aa9.68□□□□□ -0.86
CDK5RAP3-217ENST00000580287 Q8TAT8 98 aa9.68□□□□□ -0.86
CDK5RAP3-217ENST00000580287 DPF1Q92782 380 aa9.68□□□□□ -0.86
CDK5RAP3-217ENST00000580287 SMAD5-AS1Q9Y6J3 95 aa9.68□□□□□ -0.86
CDK5RAP3-217ENST00000580287 VAMP3Q15836 100 aa9.67□□□□□ -0.86
CDK5RAP3-217ENST00000580287 ATP5L2Q7Z4Y8 100 aa9.67□□□□□ -0.86
CDK5RAP3-217ENST00000580287 PEF1Q9UBV8 284 aaKnown RBP9.67□□□□□ -0.86
CDK5RAP3-217ENST00000580287 ZNF580Q9UK33 172 aa9.67□□□□□ -0.86
CDK5RAP3-217ENST00000580287 TENM1Q9UKZ4 2725 aa9.67□□□□□ -0.86
CDK5RAP3-217ENST00000580287 H0Y8G0 127 aa9.67□□□□□ -0.86
CDK5RAP3-217ENST00000580287 CHEK1O14757 476 aa9.67□□□□□ -0.86
CDK5RAP3-217ENST00000580287 BRI3O95415 125 aa9.67□□□□□ -0.86
CDK5RAP3-217ENST00000580287 S100A7P31151 101 aa9.67□□□□□ -0.86
CDK5RAP3-217ENST00000580287 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
CDK5RAP3-217ENST00000580287 FOXE3Q13461 319 aa9.66□□□□□ -0.86
CDK5RAP3-217ENST00000580287 MPV17L2Q567V2 206 aa9.66□□□□□ -0.86
CDK5RAP3-217ENST00000580287 ATRQ13535 2644 aa9.66□□□□□ -0.86
CDK5RAP3-217ENST00000580287 A0A1W2PRX2 142 aa9.66□□□□□ -0.86
CDK5RAP3-217ENST00000580287 ARMS2P0C7Q2 107 aa9.66□□□□□ -0.86
CDK5RAP3-217ENST00000580287 CRIP1P50238 77 aa9.66□□□□□ -0.86
CDK5RAP3-217ENST00000580287 RNF182Q8N6D2 247 aa9.66□□□□□ -0.86
CDK5RAP3-217ENST00000580287 TMEM70Q9BUB7 260 aa9.66□□□□□ -0.86
CDK5RAP3-217ENST00000580287 IGHV4OR15-8A0A075B7B6 117 aa9.65□□□□□ -0.86
CDK5RAP3-217ENST00000580287 A0A087WW49 117 aa9.65□□□□□ -0.86
CDK5RAP3-217ENST00000580287 TAX1BP3O14907 124 aa9.65□□□□□ -0.86
CDK5RAP3-217ENST00000580287 BUB3O43684 328 aa9.65□□□□□ -0.86
CDK5RAP3-217ENST00000580287 ELANEP08246 267 aa9.65□□□□□ -0.86
CDK5RAP3-217ENST00000580287 METTL26Q96S19 204 aa9.65□□□□□ -0.86
CDK5RAP3-217ENST00000580287 VGLL1Q99990 258 aa9.65□□□□□ -0.86
CDK5RAP3-217ENST00000580287 OR4C46A6NHA9 309 aa9.65□□□□□ -0.87
CDK5RAP3-217ENST00000580287 NPIPB6E9PJ23 425 aa9.65□□□□□ -0.87
CDK5RAP3-217ENST00000580287 GFRA4Q9GZZ7 299 aa9.65□□□□□ -0.87
CDK5RAP3-217ENST00000580287 IGKV3-7A0A075B6H7 116 aa9.64□□□□□ -0.87
CDK5RAP3-217ENST00000580287 TRBV6-1A0A0K0K1D8 114 aa9.64□□□□□ -0.87
CDK5RAP3-217ENST00000580287 PPBPP02775 128 aa9.64□□□□□ -0.87
CDK5RAP3-217ENST00000580287 CD28P10747 220 aa9.64□□□□□ -0.87
CDK5RAP3-217ENST00000580287 SCGB2A2Q13296 93 aa9.64□□□□□ -0.87
CDK5RAP3-217ENST00000580287 PMCHL2Q9BQD1 86 aa9.64□□□□□ -0.87
CDK5RAP3-217ENST00000580287 hDV102S1A0JD36 115 aa9.64□□□□□ -0.87
CDK5RAP3-217ENST00000580287 CRLF1O75462 422 aa9.64□□□□□ -0.87
CDK5RAP3-217ENST00000580287 MYOZ3Q8TDC0 251 aa9.64□□□□□ -0.87
CDK5RAP3-217ENST00000580287 ST20Q9HBF5 79 aa9.64□□□□□ -0.87
CDK5RAP3-217ENST00000580287 F8WDY8 70 aa9.63□□□□□ -0.87
CDK5RAP3-217ENST00000580287 SYNJ2BPP57105 145 aa9.63□□□□□ -0.87
CDK5RAP3-217ENST00000580287 ERCC8Q13216 396 aa9.63□□□□□ -0.87
CDK5RAP3-217ENST00000580287 BVES-AS1Q5T3Y7 98 aa9.63□□□□□ -0.87
CDK5RAP3-217ENST00000580287 UBE2E2Q96LR5 201 aa9.63□□□□□ -0.87
CDK5RAP3-217ENST00000580287 A0A1B0GUT8 65 aa9.63□□□□□ -0.87
CDK5RAP3-217ENST00000580287 TMEM190Q8WZ59 177 aa9.63□□□□□ -0.87
CDK5RAP3-217ENST00000580287 IGHV1-24A0A0C4DH33 117 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 TMEM189A5PLL7 270 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 FAM231BA6NCW3 169 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 SYS1-DBNDD2H3BUS1 97 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 NDUFA4O00483 81 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 CRXO43186 299 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 SH2D1AO60880 128 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 NUDT3O95989 172 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 LGALS1P09382 135 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 SLURP1P55000 103 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 FXYD7P58549 80 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 FAM162BQ5T6X4 162 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 C8orf86Q6ZUL3 223 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 PRR25Q96S07 402 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 CST9LQ9H4G1 147 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 TMEM89A2RUT3 159 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 PRAC2D3DTV9 90 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 KLHL30-AS1Q8NEE0 82 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 OR11H1Q8NG94 326 aa9.62□□□□□ -0.87
CDK5RAP3-217ENST00000580287 CBY3A6NI87 242 aa9.61□□□□□ -0.87
CDK5RAP3-217ENST00000580287 HOXD3P31249 432 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-217ENST00000580287 OCIAD2Q56VL3 154 aa9.61□□□□□ -0.87
CDK5RAP3-217ENST00000580287 DEFB125Q8N687 156 aa9.61□□□□□ -0.87
CDK5RAP3-217ENST00000580287 RPS20P60866 119 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-217ENST00000580287 RIGQ13278 110 aa9.61□□□□□ -0.87
CDK5RAP3-217ENST00000580287 FAM106AQ4KMX7 169 aa9.61□□□□□ -0.87
CDK5RAP3-217ENST00000580287 SLC25A34Q6PIV7 304 aa9.61□□□□□ -0.87
CDK5RAP3-217ENST00000580287 NDFIP1Q9BT67 221 aa9.61□□□□□ -0.87
CDK5RAP3-217ENST00000580287 LOC102724200A0A096LPH7 203 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-217ENST00000580287 TMEM213A2RRL7 107 aa9.6□□□□□ -0.87
CDK5RAP3-217ENST00000580287 VPS25Q9BRG1 176 aa9.6□□□□□ -0.87
CDK5RAP3-217ENST00000580287 VWFP04275 2813 aa9.6□□□□□ -0.87
CDK5RAP3-217ENST00000580287 ORM1P02763 201 aa9.6□□□□□ -0.87
CDK5RAP3-217ENST00000580287 ZNF80P51504 273 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-217ENST00000580287 TCTAP57738 103 aa9.6□□□□□ -0.87
CDK5RAP3-217ENST00000580287 RPL11P62913 178 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms