RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 ZFAND2AQ8N6M9 145 aa12.66□□□□□ -0.38
SREBF1-218ENST00000578469 FER1L6-AS1Q8NA97 138 aa12.66□□□□□ -0.38
SREBF1-218ENST00000578469 SPAG8Q99932 426 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-218ENST00000578469 TPPP3Q9BW30 176 aa12.66□□□□□ -0.38
SREBF1-218ENST00000578469 APRG1Q8IVJ8 170 aa12.65□□□□□ -0.38
SREBF1-218ENST00000578469 ADARB2-AS1A8MUL3 147 aa12.64□□□□□ -0.39
SREBF1-218ENST00000578469 F2Z2F3 143 aa12.64□□□□□ -0.39
SREBF1-218ENST00000578469 J3KRW8 73 aa12.64□□□□□ -0.39
SREBF1-218ENST00000578469 TSPOP30536 169 aa12.64□□□□□ -0.39
SREBF1-218ENST00000578469 CD300EQ496F6 205 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-218ENST00000578469 COA6Q5JTJ3 125 aaKnown RBP12.64□□□□□ -0.39
SREBF1-218ENST00000578469 LYZL1Q6UWQ5 148 aa12.64□□□□□ -0.39
SREBF1-218ENST00000578469 GRIFINA4D1Z8 144 aa12.63□□□□□ -0.39
SREBF1-218ENST00000578469 ARMS2P0C7Q2 107 aa12.63□□□□□ -0.39
SREBF1-218ENST00000578469 IGLC6P0CF74 106 aa12.63□□□□□ -0.39
SREBF1-218ENST00000578469 CD33P20138 364 aa12.63□□□□□ -0.39
SREBF1-218ENST00000578469 RNASE4P34096 147 aaKnown RBP12.63□□□□□ -0.39
SREBF1-218ENST00000578469 CTRLP40313 264 aa12.63□□□□□ -0.39
SREBF1-218ENST00000578469 AKR1D1P51857 326 aa12.63□□□□□ -0.39
SREBF1-218ENST00000578469 DEFB131AP59861 70 aa12.63□□□□□ -0.39
SREBF1-218ENST00000578469 PRR9Q5T870 116 aa12.63□□□□□ -0.39
SREBF1-218ENST00000578469 GDF5OSQ5U4N7 250 aa12.63□□□□□ -0.39
SREBF1-218ENST00000578469 IGKV3D-20A0A0C4DH25 116 aa12.62□□□□□ -0.39
SREBF1-218ENST00000578469 KLLNB2CW77 178 aa12.61□□□□□ -0.39
SREBF1-218ENST00000578469 S100A2P29034 98 aa12.61□□□□□ -0.39
SREBF1-218ENST00000578469 CMC4P56277 68 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-218ENST00000578469 KRTAP10-3P60369 221 aa12.61□□□□□ -0.39
SREBF1-218ENST00000578469 SLAQ13239 276 aa12.61□□□□□ -0.39
SREBF1-218ENST00000578469 GATD1Q8NB37 220 aa12.61□□□□□ -0.39
SREBF1-218ENST00000578469 CITED1Q99966 193 aa12.61□□□□□ -0.39
SREBF1-218ENST00000578469 C11orf21Q9P2W6 132 aa12.61□□□□□ -0.39
SREBF1-218ENST00000578469 NAGKQ9UJ70 344 aa12.61□□□□□ -0.39
SREBF1-218ENST00000578469 C7orf71A4D174 169 aa12.6□□□□□ -0.39
SREBF1-218ENST00000578469 SAP30O75446 220 aa12.6□□□□□ -0.39
SREBF1-218ENST00000578469 PF4P02776 101 aa12.6□□□□□ -0.39
SREBF1-218ENST00000578469 KIAA1644Q3SXP7 199 aa12.6□□□□□ -0.39
SREBF1-218ENST00000578469 HIST3H2BBQ8N257 126 aa12.6□□□□□ -0.39
SREBF1-218ENST00000578469 OR2K2Q8NGT1 345 aa12.6□□□□□ -0.39
SREBF1-218ENST00000578469 SSBP4Q9BWG4 385 aaPredicted RBP12.6□□□□□ -0.39
SREBF1-218ENST00000578469 IGKV3-20P01619 116 aa12.59□□□□□ -0.39
SREBF1-218ENST00000578469 SRIP30626 198 aa12.59□□□□□ -0.39
SREBF1-218ENST00000578469 Q0VG73 95 aa12.59□□□□□ -0.39
SREBF1-218ENST00000578469 OR10J3Q5JRS4 329 aa12.59□□□□□ -0.39
SREBF1-218ENST00000578469 BAGE3Q86Y29 109 aa12.59□□□□□ -0.39
SREBF1-218ENST00000578469 MAP6D1Q9H9H5 199 aa12.59□□□□□ -0.39
SREBF1-218ENST00000578469 HLA-DRB4P13762 266 aa12.58□□□□□ -0.4
SREBF1-218ENST00000578469 CDKN1BP46527 198 aa12.58□□□□□ -0.4
SREBF1-218ENST00000578469 CACNG7P62955 275 aa12.58□□□□□ -0.4
SREBF1-218ENST00000578469 TWIST1Q15672 202 aa12.58□□□□□ -0.4
SREBF1-218ENST00000578469 KCNS1Q96KK3 526 aa12.58□□□□□ -0.4
SREBF1-218ENST00000578469 HLA-DRB4X5D2U9 266 aa12.58□□□□□ -0.4
SREBF1-218ENST00000578469 KNCNA6PVL3 124 aa12.57□□□□□ -0.4
SREBF1-218ENST00000578469 MED14OSP0DP75 135 aa12.57□□□□□ -0.4
SREBF1-218ENST00000578469 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
SREBF1-218ENST00000578469 ASIPP42127 132 aa12.57□□□□□ -0.4
SREBF1-218ENST00000578469 ANXA2RQ3ZCQ2 193 aa12.57□□□□□ -0.4
SREBF1-218ENST00000578469 GFI1BQ5VTD9 330 aa12.57□□□□□ -0.4
SREBF1-218ENST00000578469 FAM159AQ6UWV7 190 aa12.57□□□□□ -0.4
SREBF1-218ENST00000578469 ZNF493Q6ZR52 646 aa12.57□□□□□ -0.4
SREBF1-218ENST00000578469 ZNF575Q86XF7 245 aa12.57□□□□□ -0.4
SREBF1-218ENST00000578469 CNFNQ9BYD5 112 aa12.57□□□□□ -0.4
SREBF1-218ENST00000578469 ZNF256Q9Y2P7 627 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-218ENST00000578469 LOC102724200A0A096LPH7 203 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-218ENST00000578469 H3BMM0 161 aa12.56□□□□□ -0.4
SREBF1-218ENST00000578469 OR5AL1P0C617 328 aa12.56□□□□□ -0.4
SREBF1-218ENST00000578469 NTF3P20783 257 aa12.56□□□□□ -0.4
SREBF1-218ENST00000578469 SSTP61278 116 aa12.56□□□□□ -0.4
SREBF1-218ENST00000578469 PDZD11Q5EBL8 140 aa12.56□□□□□ -0.4
SREBF1-218ENST00000578469 ALKBH7Q9BT30 221 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-218ENST00000578469 TRAV12-3A0A0B4J271 114 aa12.55□□□□□ -0.4
SREBF1-218ENST00000578469 A8MTW9 85 aa12.55□□□□□ -0.4
SREBF1-218ENST00000578469 SNAI2O43623 268 aa12.55□□□□□ -0.4
SREBF1-218ENST00000578469 KIR3DS1Q14943 382 aa12.55□□□□□ -0.4
SREBF1-218ENST00000578469 MUC21Q5SSG8 566 aa12.55□□□□□ -0.4
SREBF1-218ENST00000578469 AMTNQ6UX39 209 aa12.55□□□□□ -0.4
SREBF1-218ENST00000578469 Q6ZQT7 251 aa12.55□□□□□ -0.4
SREBF1-218ENST00000578469 SMIM15Q7Z3B0 74 aa12.55□□□□□ -0.4
SREBF1-218ENST00000578469 MUC21A0A0G2JKD1 596 aa12.54□□□□□ -0.4
SREBF1-218ENST00000578469 MUC21A0A140T8X8 626 aa12.54□□□□□ -0.4
SREBF1-218ENST00000578469 OR11H12B2RN74 326 aa12.54□□□□□ -0.4
SREBF1-218ENST00000578469 IGLV1-51P01701 117 aa12.54□□□□□ -0.4
SREBF1-218ENST00000578469 SPINK13Q1W4C9 94 aa12.54□□□□□ -0.4
SREBF1-218ENST00000578469 DNLZQ5SXM8 178 aa12.54□□□□□ -0.4
SREBF1-218ENST00000578469 SPANXN1Q5VSR9 72 aa12.54□□□□□ -0.4
SREBF1-218ENST00000578469 LINC00482Q8N8I6 264 aa12.54□□□□□ -0.4
SREBF1-218ENST00000578469 TMEM18Q96B42 140 aa12.54□□□□□ -0.4
SREBF1-218ENST00000578469 H3BVH4 76 aa12.53□□□□□ -0.4
SREBF1-218ENST00000578469 M0R2Z0 102 aa12.53□□□□□ -0.4
SREBF1-218ENST00000578469 FAM104BQ5XKR9 115 aa12.53□□□□□ -0.4
SREBF1-218ENST00000578469 CLUHP3Q96NS8 147 aa12.53□□□□□ -0.4
SREBF1-218ENST00000578469 TMEM191AQ9H0A3 160 aa12.53□□□□□ -0.4
SREBF1-218ENST00000578469 IGHV4-4A0A075B6R2 117 aa12.52□□□□□ -0.41
SREBF1-218ENST00000578469 ZNF324O75467 553 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-218ENST00000578469 ESDP10768 282 aa12.52□□□□□ -0.41
SREBF1-218ENST00000578469 FABP4P15090 132 aa12.52□□□□□ -0.41
SREBF1-218ENST00000578469 TMEM256Q8N2U0 113 aa12.52□□□□□ -0.41
SREBF1-218ENST00000578469 C18orf32Q8TCD1 76 aa12.52□□□□□ -0.41
SREBF1-218ENST00000578469 TIMM8BQ9Y5J9 83 aaPredicted RBP12.52□□□□□ -0.41
SREBF1-218ENST00000578469 TRAV12-2A0A075B6T6 113 aa12.51□□□□□ -0.41
SREBF1-218ENST00000578469 IFITM10A6NMD0 228 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 850.6 ms