RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 FAM162BQ5T6X4 162 aa7.41□□□□□ -1.22
CRLF3-202ENST00000577725 FAM231DQ6ZW35 169 aa7.41□□□□□ -1.22
CRLF3-202ENST00000577725 SMIM12Q96EX1 92 aa7.41□□□□□ -1.22
CRLF3-202ENST00000577725 CTDSP1Q9GZU7 261 aa7.41□□□□□ -1.22
CRLF3-202ENST00000577725 RPP21Q9H633 154 aaKnown RBP7.41□□□□□ -1.22
CRLF3-202ENST00000577725 C11orf21Q9P2W6 132 aa7.41□□□□□ -1.22
CRLF3-202ENST00000577725 HLA-DRB4X5D2U9 266 aa7.41□□□□□ -1.22
CRLF3-202ENST00000577725 TRAV12-2A0A075B6T6 113 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 TGIF2-C20orf24A0A0A6YYL0 155 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 PRSS47A8MTI9 375 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 RPL35AP18077 110 aaKnown RBP7.4□□□□□ -1.22
CRLF3-202ENST00000577725 LEPP41159 167 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 FAM3BP58499 235 aaPredicted RBP7.4□□□□□ -1.22
CRLF3-202ENST00000577725 AMTNQ6UX39 209 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 COX8CQ7Z4L0 72 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 OR2D3Q8NGH3 330 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 YPEL4Q96NS1 127 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 MCRIP2Q9BUT9 160 aaKnown RBP7.4□□□□□ -1.22
CRLF3-202ENST00000577725 BIN3Q9NQY0 253 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 C19orf73Q9NVV2 129 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 IL36BQ9NZH7 164 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 NAGKQ9UJ70 344 aa7.4□□□□□ -1.22
CRLF3-202ENST00000577725 GRIFINA4D1Z8 144 aa7.39□□□□□ -1.23
CRLF3-202ENST00000577725 GPX1P07203 203 aa7.39□□□□□ -1.23
CRLF3-202ENST00000577725 CXCL1P09341 107 aa7.39□□□□□ -1.23
CRLF3-202ENST00000577725 CRISP2P16562 243 aa7.39□□□□□ -1.23
CRLF3-202ENST00000577725 INSL3P51460 131 aa7.39□□□□□ -1.23
CRLF3-202ENST00000577725 DEFB125Q8N687 156 aa7.39□□□□□ -1.23
CRLF3-202ENST00000577725 TUBA4BQ9H853 241 aa7.39□□□□□ -1.23
CRLF3-202ENST00000577725 LENEPQ9Y5L5 61 aa7.39□□□□□ -1.23
CRLF3-202ENST00000577725 TRAV12-3A0A0B4J271 114 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 C7orf71A4D174 169 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 TMEM189A5PLL7 270 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 A8MTW9 85 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 FABP5P3A8MUU1 101 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 SPINK4O60575 86 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 ORM1P02763 201 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 PFN1P07737 140 aaKnown RBP7.38□□□□□ -1.23
CRLF3-202ENST00000577725 ELOBQ15370 118 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 MUC21Q5SSG8 566 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 GFI1BQ5VTD9 330 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 STHQ8IWL8 128 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 RCHY1Q96PM5 261 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 ODF3Q96PU9 254 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 TMEM242Q9NWH2 141 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 ABCA13Q86UQ4 5058 aa7.38□□□□□ -1.23
CRLF3-202ENST00000577725 A0A1W2PPQ1 181 aa7.37□□□□□ -1.23
CRLF3-202ENST00000577725 CXorf65A6NEN9 183 aa7.37□□□□□ -1.23
CRLF3-202ENST00000577725 COLCA2A8K830 154 aa7.37□□□□□ -1.23
CRLF3-202ENST00000577725 KLLNB2CW77 178 aa7.37□□□□□ -1.23
CRLF3-202ENST00000577725 S100PP25815 95 aa7.37□□□□□ -1.23
CRLF3-202ENST00000577725 CMC4P56277 68 aaPredicted RBP7.37□□□□□ -1.23
CRLF3-202ENST00000577725 TRPT1Q86TN4 253 aaKnown RBP7.37□□□□□ -1.23
CRLF3-202ENST00000577725 PGLYRP4Q96LB8 373 aa7.37□□□□□ -1.23
CRLF3-202ENST00000577725 NEU1Q99519 415 aa7.37□□□□□ -1.23
CRLF3-202ENST00000577725 TRAV21A0A0B4J279 112 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 IGKV3D-20A0A0C4DH25 116 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 MUC21A0A0G2JKD1 596 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 TRBV7-9A0A0J9YWB2 115 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 MUC21A0A140T8X8 626 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 SMIM27A0A1W2PRY6 76 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 SPRY2O43597 315 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 FRMD6-AS1P0C7T7 363 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 RBMY1A1P0DJD3 496 aaKnown RBP7.36□□□□□ -1.23
CRLF3-202ENST00000577725 RBMY1CP0DJD4 496 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 TSPOP30536 169 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 CDKN1BP46527 198 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 RBMY1FQ15415 496 aaKnown RBP7.36□□□□□ -1.23
CRLF3-202ENST00000577725 ANXA2RQ3ZCQ2 193 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 Q6AWC8 147 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 KCNIP4Q6PIL6 250 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 GTSCR1Q86UQ5 136 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 TSKUQ8WUA8 353 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 GTSF1Q8WW33 167 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 TPPP3Q9BW30 176 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 SRD5A3Q9H8P0 318 aa7.36□□□□□ -1.23
CRLF3-202ENST00000577725 TIMM8BQ9Y5J9 83 aaPredicted RBP7.36□□□□□ -1.23
CRLF3-202ENST00000577725 HECTD4Q9Y4D8 3996 aa7.35□□□□□ -1.23
CRLF3-202ENST00000577725 HIGD1CA8MV81 97 aa7.35□□□□□ -1.23
CRLF3-202ENST00000577725 A8MWL6 223 aa7.35□□□□□ -1.23
CRLF3-202ENST00000577725 CRXO43186 299 aaPredicted RBP7.35□□□□□ -1.23
CRLF3-202ENST00000577725 SSTP61278 116 aa7.35□□□□□ -1.23
CRLF3-202ENST00000577725 CT83Q5H943 113 aa7.35□□□□□ -1.23
CRLF3-202ENST00000577725 MRPL54Q6P161 138 aaKnown RBP7.35□□□□□ -1.23
CRLF3-202ENST00000577725 ZNF575Q86XF7 245 aa7.35□□□□□ -1.23
CRLF3-202ENST00000577725 NUP35Q8NFH5 326 aa7.35□□□□□ -1.23
CRLF3-202ENST00000577725 XCL2Q9UBD3 114 aa7.35□□□□□ -1.23
CRLF3-202ENST00000577725 ZMAT5Q9UDW3 170 aaKnown RBP7.35□□□□□ -1.23
CRLF3-202ENST00000577725 HUWE1Q7Z6Z7 4374 aaKnown RBP7.34□□□□□ -1.23
CRLF3-202ENST00000577725 GNRH2O43555 120 aa7.34□□□□□ -1.23
CRLF3-202ENST00000577725 ZNF324O75467 553 aaPredicted RBP7.34□□□□□ -1.23
CRLF3-202ENST00000577725 PRM2P04554 102 aa7.34□□□□□ -1.23
CRLF3-202ENST00000577725 RPS20P60866 119 aaKnown RBP7.34□□□□□ -1.23
CRLF3-202ENST00000577725 CFAP161Q6P656 301 aa7.34□□□□□ -1.23
CRLF3-202ENST00000577725 Q8N1Y9 231 aa7.34□□□□□ -1.23
CRLF3-202ENST00000577725 FAM210BQ96KR6 192 aa7.34□□□□□ -1.23
CRLF3-202ENST00000577725 IMMP2LQ96T52 175 aa7.34□□□□□ -1.23
CRLF3-202ENST00000577725 FAM110AQ9BQ89 295 aa7.34□□□□□ -1.23
CRLF3-202ENST00000577725 TP53TG3Q9ULZ0 132 aa7.34□□□□□ -1.23
CRLF3-202ENST00000577725 H3BVH4 76 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms