RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 IGHV3-30P01768 117 aa6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 IGHV3-33P01772 117 aa6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 ORM1P02763 201 aa6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 IGHV3-30-3P0DP02 117 aa6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 IGHV3-30-5P0DP03 117 aa6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 TPT1P13693 172 aaKnown RBP6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 CAMLGP49069 296 aa6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 LRRC37A5PQ49AS3 106 aa6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 MUC21Q5SSG8 566 aa6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 EIF5AL1Q6IS14 154 aaKnown RBP6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 C9orf47Q6ZRZ4 202 aa6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 MRPL53Q96EL3 112 aaKnown RBP6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 TXNDC17Q9BRA2 123 aa6.7□□□□□ -1.34
NPLOC4-220ENST00000576940 IGKV2-40A0A087WW87 121 aaPredicted RBP6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 LECT2O14960 151 aa6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 ZNF253O75346 499 aa6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 IGKV2D-40P01614 121 aaPredicted RBP6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 S100A10P60903 97 aa6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 ZNF266Q14584 549 aa6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 LINC01556Q5JQF7 62 aa6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 SCXQ7RTU7 201 aa6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 TMEM252Q8N6L7 170 aa6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 OR10G4Q8NGN3 311 aa6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 RASL10AQ92737 203 aa6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 GGACTQ9BVM4 153 aa6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 TIMM9Q9Y5J7 89 aa6.69□□□□□ -1.34
NPLOC4-220ENST00000576940 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 IGHV3-16A0A0C4DH30 117 aa6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 C9JCJ5 164 aa6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 NMBP08949 121 aa6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 SEC11BP0C7V7 166 aa6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 PYYP10082 97 aa6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 HIST1H1EP10412 219 aaKnown RBP6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 SULT1A1P50225 295 aa6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 FAM122CQ6P4D5 195 aa6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 NHLRC2Q8NBF2 726 aa6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 OR1L4Q8NGR5 311 aa6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 ZNF492Q9P255 531 aa6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 PRELID1Q9Y255 219 aa6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 LSM5Q9Y4Y9 91 aaKnown RBP6.68□□□□□ -1.34
NPLOC4-220ENST00000576940 BORCS7-ASMTA0A0B4J1R7 106 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 PPT1P50897 306 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 RAB5CP51148 216 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 VAMP2P63027 116 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 ATP6V1FQ16864 119 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 VWC2Q2TAL6 325 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 OR10J3Q5JRS4 329 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 TMEM78Q5T7P6 136 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 STX12Q86Y82 276 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 OR4C5Q8NGB2 326 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 Q8TAT8 98 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 ZNF471Q9BX82 626 aaPredicted RBP6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 LRP2P98164 4655 aa6.67□□□□□ -1.34
NPLOC4-220ENST00000576940 TRAV8-6A0A0B4J262 113 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 TRAV4A0A0B4J268 109 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 IGSF23A1L1A6 192 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 GNRH2O43555 120 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 TIRAPP58753 221 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 RAB14P61106 215 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 HBG1P69891 147 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 HBG2P69892 147 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 RAB31Q13636 194 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 TMEM183BQ1AE95 376 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 TMEM183AQ8IXX5 376 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 Q8N3U1 123 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 LYPD6BQ8NI32 183 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 PFDN5Q99471 154 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 SLC39A9Q9NUM3 307 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 TMEM14CQ9P0S9 112 aa6.66□□□□□ -1.34
NPLOC4-220ENST00000576940 FAM24AA6NFZ4 105 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 UMAD1C9J7I0 102 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 CST7O76096 145 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 S100A1P23297 94 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 RPL29P47914 159 aaKnown RBP6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 SULT1A2P50226 295 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 ZNF138P52744 262 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 PDE6HQ13956 83 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 CIRBP-AS1Q8TBR5 109 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 BAALCQ8WXS3 180 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 ATP5SQ99766 215 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 SPXQ9BT56 116 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 PSMG3Q9BT73 122 aaPredicted RBP6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 CHAC1Q9BUX1 264 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 TM2D2Q9BX73 214 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 AAMDCQ9H7C9 122 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 WDR83OSQ9Y284 106 aa6.65□□□□□ -1.34
NPLOC4-220ENST00000576940 GATA1P15976 413 aaPredicted RBP6.64□□□□□ -1.35
NPLOC4-220ENST00000576940 CAV2P51636 162 aa6.64□□□□□ -1.35
NPLOC4-220ENST00000576940 NHLH2Q02577 135 aa6.64□□□□□ -1.35
NPLOC4-220ENST00000576940 GCSAMLQ5JQS6 135 aa6.64□□□□□ -1.35
NPLOC4-220ENST00000576940 RPL7L1Q6DKI1 246 aaKnown RBP6.64□□□□□ -1.35
NPLOC4-220ENST00000576940 FAM159AQ6UWV7 190 aa6.64□□□□□ -1.35
NPLOC4-220ENST00000576940 DPPA3Q6W0C5 159 aa6.64□□□□□ -1.35
NPLOC4-220ENST00000576940 SH2D6Q7Z4S9 175 aa6.64□□□□□ -1.35
NPLOC4-220ENST00000576940 OR2G3Q8NGZ4 309 aa6.64□□□□□ -1.35
NPLOC4-220ENST00000576940 SLC25A2Q9BXI2 301 aa6.64□□□□□ -1.35
NPLOC4-220ENST00000576940 RBFOX3A6NFN3 312 aa6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 ATP6V1G1O75348 118 aa6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 NDUFS6O75380 124 aaKnown RBP6.63□□□□□ -1.35
NPLOC4-220ENST00000576940 IGLV2-8P01709 118 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms