RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ZFYVE26Q68DK2 2539 aa14.05□□□□□ -0.16
ATPAF1-214ENST00000576409 HLA-DRB4P13762 266 aa14.04□□□□□ -0.16
ATPAF1-214ENST00000576409 AZU1P20160 251 aa14.04□□□□□ -0.16
ATPAF1-214ENST00000576409 HLA-DRB4X5D2U9 266 aa14.04□□□□□ -0.16
ATPAF1-214ENST00000576409 TRAV12-2A0A075B6T6 113 aa14.04□□□□□ -0.16
ATPAF1-214ENST00000576409 CFHR4Q92496 578 aa14.04□□□□□ -0.16
ATPAF1-214ENST00000576409 SCGB1A1P11684 91 aa14.04□□□□□ -0.16
ATPAF1-214ENST00000576409 ANXA2RQ3ZCQ2 193 aa14.04□□□□□ -0.16
ATPAF1-214ENST00000576409 PRAC2D3DTV9 90 aa14.04□□□□□ -0.16
ATPAF1-214ENST00000576409 LINC00310P59036 64 aa14.04□□□□□ -0.16
ATPAF1-214ENST00000576409 PHLDA1Q8WV24 401 aaPredicted RBP14.04□□□□□ -0.16
ATPAF1-214ENST00000576409 PLA2G2CQ5R387 149 aa14.03□□□□□ -0.16
ATPAF1-214ENST00000576409 I3L2K1 104 aa14.03□□□□□ -0.16
ATPAF1-214ENST00000576409 DNAL4O96015 105 aa14.03□□□□□ -0.16
ATPAF1-214ENST00000576409 ADARB2-AS1A8MUL3 147 aa14.03□□□□□ -0.16
ATPAF1-214ENST00000576409 SRSF8Q9BRL6 282 aaKnown RBP14.03□□□□□ -0.16
ATPAF1-214ENST00000576409 MOB4Q9Y3A3 225 aa14.03□□□□□ -0.16
ATPAF1-214ENST00000576409 GAGE2BQ13066 116 aa14.02□□□□□ -0.16
ATPAF1-214ENST00000576409 GAGE2EQ4V326 116 aa14.02□□□□□ -0.16
ATPAF1-214ENST00000576409 GAGE2DQ9UEU5 116 aa14.02□□□□□ -0.16
ATPAF1-214ENST00000576409 VCYO14598 125 aa14.02□□□□□ -0.17
ATPAF1-214ENST00000576409 WFDC2Q14508 124 aa14.02□□□□□ -0.17
ATPAF1-214ENST00000576409 MINOS1Q5TGZ0 78 aa14.02□□□□□ -0.17
ATPAF1-214ENST00000576409 KLK9Q9UKQ9 250 aa14.02□□□□□ -0.17
ATPAF1-214ENST00000576409 MINOS1-NBL1R4GNA1 71 aa14.02□□□□□ -0.17
ATPAF1-214ENST00000576409 CGB3P0DN86 165 aa14.02□□□□□ -0.17
ATPAF1-214ENST00000576409 CGB7P0DN87 165 aa14.02□□□□□ -0.17
ATPAF1-214ENST00000576409 EIF4EBP1Q13541 118 aaPredicted RBP14.02□□□□□ -0.17
ATPAF1-214ENST00000576409 MAPK1IP1LQ8NDC0 245 aa14.02□□□□□ -0.17
ATPAF1-214ENST00000576409 TNRC6AQ8NDV7 1962 aaKnown RBP14.02□□□□□ -0.17
ATPAF1-214ENST00000576409 MUC22E2RYF6 1773 aaPredicted RBP14.02□□□□□ -0.17
ATPAF1-214ENST00000576409 M0R1W7 72 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 C10orf126Q8N4M7 172 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 GNRH2O43555 120 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 SPINK13Q1W4C9 94 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 GAGE12HA6NDE8 117 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 TMEM262E9PQX1 116 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 IGLV2-23P01705 113 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 IGHV3-53P01767 116 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 Q8N7P7 452 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 KLHL30-AS1Q8NEE0 82 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 CHD9Q3L8U1 2897 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 DSCAMO60469 2012 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 C12orf74Q32Q52 190 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 SPATA12Q7Z6I5 190 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 SMIM2Q9BVW6 85 aa14.01□□□□□ -0.17
ATPAF1-214ENST00000576409 F8VRH5 84 aa14□□□□□ -0.17
ATPAF1-214ENST00000576409 CEND1Q8N111 149 aa14□□□□□ -0.17
ATPAF1-214ENST00000576409 KLF12Q9Y4X4 402 aa14□□□□□ -0.17
ATPAF1-214ENST00000576409 POLQO75417 2590 aa14□□□□□ -0.17
ATPAF1-214ENST00000576409 RNASE13Q5GAN3 156 aaKnown RBP14□□□□□ -0.17
ATPAF1-214ENST00000576409 MTORP42345 2549 aa13.99□□□□□ -0.17
ATPAF1-214ENST00000576409 TRBV7-1A0A0A6YYK4 115 aa13.99□□□□□ -0.17
ATPAF1-214ENST00000576409 SDHAF1A6NFY7 115 aa13.99□□□□□ -0.17
ATPAF1-214ENST00000576409 MYMXA0A1B0GTQ4 84 aa13.99□□□□□ -0.17
ATPAF1-214ENST00000576409 CTRLP40313 264 aa13.99□□□□□ -0.17
ATPAF1-214ENST00000576409 RPL39LQ96EH5 51 aaKnown RBP13.99□□□□□ -0.17
ATPAF1-214ENST00000576409 SHISA9B4DS77 424 aa13.98□□□□□ -0.17
ATPAF1-214ENST00000576409 MBD6Q96DN6 1003 aa13.98□□□□□ -0.17
ATPAF1-214ENST00000576409 KAAG1Q9UBP8 84 aa13.98□□□□□ -0.17
ATPAF1-214ENST00000576409 TMEM238C9JI98 176 aa13.98□□□□□ -0.17
ATPAF1-214ENST00000576409 VPS13AQ96RL7 3174 aa13.98□□□□□ -0.17
ATPAF1-214ENST00000576409 SYNJ2BPP57105 145 aa13.98□□□□□ -0.17
ATPAF1-214ENST00000576409 TRBV7-9A0A0J9YWB2 115 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 C19orf71A6NCJ1 209 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 LINC01559Q495D7 138 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 ATG2AQ2TAZ0 1938 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 TRAV8-3A0A0A6YYJ7 113 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 PRSS29PA6NIE9 313 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 OOSP1A8MZH6 123 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 TEX22C9J3V5 150 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 ZFAND6Q6FIF0 208 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 TRGV2A0A075B6R0 118 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 A0A1B0GXF2 115 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 M0R2P5 195 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 IGFL3Q6UXB1 125 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 C1orf159Q96HA4 380 aa13.97□□□□□ -0.17
ATPAF1-214ENST00000576409 IGHV3-16A0A0C4DH30 117 aa13.96□□□□□ -0.17
ATPAF1-214ENST00000576409 CTSGP08311 255 aa13.96□□□□□ -0.17
ATPAF1-214ENST00000576409 FAM110DQ8TAY7 271 aaPredicted RBP13.96□□□□□ -0.17
ATPAF1-214ENST00000576409 C2orf82Q6UX34 121 aa13.96□□□□□ -0.17
ATPAF1-214ENST00000576409 UBE2E2Q96LR5 201 aa13.96□□□□□ -0.17
ATPAF1-214ENST00000576409 PTPRSQ13332 1948 aa13.96□□□□□ -0.17
ATPAF1-214ENST00000576409 TRAV13-1A0A0B4J241 112 aa13.95□□□□□ -0.18
ATPAF1-214ENST00000576409 TRAV8-4A0A0B4J246 113 aa13.95□□□□□ -0.18
ATPAF1-214ENST00000576409 WDFY4Q6ZS81 3184 aa13.95□□□□□ -0.18
ATPAF1-214ENST00000576409 CR1LQ2VPA4 569 aa13.95□□□□□ -0.18
ATPAF1-214ENST00000576409 VWC2LB2RUY7 222 aa13.95□□□□□ -0.18
ATPAF1-214ENST00000576409 FREM2Q5SZK8 3169 aa13.94□□□□□ -0.18
ATPAF1-214ENST00000576409 ZNF80P51504 273 aaPredicted RBP13.94□□□□□ -0.18
ATPAF1-214ENST00000576409 IGHV3-38A0A0C4DH36 116 aa13.93□□□□□ -0.18
ATPAF1-214ENST00000576409 C11orf68Q9H3H3 251 aaKnown RBP13.93□□□□□ -0.18
ATPAF1-214ENST00000576409 IGLV1-47P01700 117 aa13.93□□□□□ -0.18
ATPAF1-214ENST00000576409 MLST8Q9BVC4 326 aa13.93□□□□□ -0.18
ATPAF1-214ENST00000576409 PRSS22Q9GZN4 317 aa13.93□□□□□ -0.18
ATPAF1-214ENST00000576409 TCF15Q12870 199 aa13.93□□□□□ -0.18
ATPAF1-214ENST00000576409 A0A087WX48 190 aa13.93□□□□□ -0.18
ATPAF1-214ENST00000576409 F8W1H4 67 aa13.93□□□□□ -0.18
ATPAF1-214ENST00000576409 DAZ1Q9NQZ3 744 aaKnown RBP13.93□□□□□ -0.18
ATPAF1-214ENST00000576409 LRRK2Q5S007 2527 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms