RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	LCE3E	Q5T5B0	92 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	GUSBP11	Q6P575	273 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ATP11AUN	Q6ZP68	121 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	C7orf65	Q6ZTY9	151 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LINC00643	Q86TS7	51 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	DIRC1	Q969H9	104 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	SPTSSA	Q969W0	71 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	NPCDR1	Q9BY65	106 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	NXT2	Q9NPJ8	142 aa	Known RBP	3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ABRACL	Q9P1F3	81 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	NLRC5	Q86WI3	1866 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LRP4	O75096	1905 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	MIA3	Q5JRA6	1907 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	MRC1	P22897	1456 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	AHDC1	Q5TGY3	1603 aa	Predicted RBP	3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	MON2	Q7Z3U7	1717 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	KIDINS220	Q9ULH0	1771 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	PATJ	Q8NI35	1801 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TET2	Q6N021	2002 aa	Predicted RBP	3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	IGKV2D-24	A0A075B6R9	120 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	IGHV1-24	A0A0C4DH33	117 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	hADV29S1	A0JD25	119 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909		F2Z2F3	143 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	CCL16	O15467	120 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TIMM17B	O60830	172 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LTA	P01374	205 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	HIST1H4A	P62805	103 aa	Known RBP	3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	PRNT	Q86SH4	94 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909		Q8N2B8	174 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TMEM256	Q8N2U0	113 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	SMIM4	Q8WVI0	70 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	EPDR1	Q9UM22	224 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	HHLA3	Q9XRX5	114 aa		3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	KLK5	Q9Y337	293 aa	Predicted RBP	3.84	□□□□□ -1.79
TOM1L1-222	ENST00000575909	CEP170	Q5SW79	1584 aa		3.84	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CDC42BPG	Q6DT37	1551 aa		3.84	□□□□□ -1.8
TOM1L1-222	ENST00000575909	MROH2B	Q7Z745	1585 aa		3.84	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IGKV1-27	A0A075B6S5	117 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IGHV1-45	A0A0A0MS14	117 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	TRAV1-1	A0A0B4J248	108 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IGKV1-5	P01602	117 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IGHV3-11	P01762	117 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	ASAH2B	P0C7U1	165 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	LINC01554	Q52M75	96 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	LINC00483	Q53H64	154 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	RPL7L1	Q6DKI1	246 aa	Known RBP	3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	FP248	Q71RG6	208 aa	Predicted RBP	3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	C6orf201	Q7Z4U5	140 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	GPHB5	Q86YW7	130 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	C8orf17	Q9NRJ1	99 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	TAC3	Q9UHF0	121 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	AGL	P35573	1532 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	PIK3C2A	O00443	1686 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	TET3	O43151	1660 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IQGAP1	P46940	1657 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	DOCK4	Q8N1I0	1966 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	PIKFYVE	Q9Y2I7	2098 aa		3.83	□□□□□ -1.8
TOM1L1-222	ENST00000575909	MYO5A	Q9Y4I1	1855 aa	Known RBP	3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CLTC	Q00610	1675 aa	Known RBP	3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	SAA1	P0DJI8	122 aa	Predicted RBP	3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CCL4	P13236	92 aa		3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	DAP	P51397	102 aa		3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	BLCAP	P62952	87 aa		3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CYP2G1P	Q6ZSU1	146 aa		3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	UPK3B	Q9BT76	320 aa		3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	DYNLRB1	Q9NP97	96 aa		3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IL36B	Q9NZH7	164 aa		3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	ZNF492	Q9P255	531 aa		3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	ARL2-SNX15	V9GYD0	113 aa		3.82	□□□□□ -1.8
TOM1L1-222	ENST00000575909	DOCK1	Q14185	1865 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	TRPM7	Q96QT4	1865 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	ASXL1	Q8IXJ9	1541 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	COL1A1	P02452	1464 aa	Predicted RBP	3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IGHV3-72	A0A0B4J1Y9	119 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IGHV7-4-1	A0A0J9YVY3	117 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IBA57-AS1	B1ANH7	110 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	BUB1B-PAK6	H3BSN5	160 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	C1QA	P02745	245 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	RPL30	P62888	115 aa	Known RBP	3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CIRBP	Q14011	172 aa	Known RBP	3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	RNASE13	Q5GAN3	156 aa	Known RBP	3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	NOXRED1	Q6NXP6	359 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	ZNF645	Q8N7E2	425 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	LINC01560	Q8TB33	94 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	PPP1R1C	Q8WVI7	109 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	ODF3	Q96PU9	254 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	XAGE1A	Q9HD64	81 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	SIPA1L3	O60292	1781 aa	Predicted RBP	3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	ARHGEF28	Q8N1W1	1705 aa	Known RBP	3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	NWD2	Q9ULI1	1742 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	USP32	Q8NFA0	1604 aa		3.81	□□□□□ -1.8
TOM1L1-222	ENST00000575909	DOCK8	Q8NF50	2099 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IGLV4-60	A0A075B6I1	120 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	IGKV1D-43	A0A0B4J1Z2	117 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	FXYD1	O00168	92 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	CCK	P06307	115 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	FUS	P35637	526 aa	Known RBP eCLIP	3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	KRTAP12-2	P59991	146 aa		3.8	□□□□□ -1.8
TOM1L1-222	ENST00000575909	FGF12	P61328	243 aa		3.8	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms