RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 GNG13Q9P2W3 67 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 TP53TG3Q9ULZ0 132 aa10.61□□□□□ -0.71
TRAPPC1-207ENST00000575639 TRGV2A0A075B6R0 118 aa10.6□□□□□ -0.71
TRAPPC1-207ENST00000575639 TRGV1A0A0A0MS02 117 aa10.6□□□□□ -0.71
TRAPPC1-207ENST00000575639 F5H768 121 aa10.6□□□□□ -0.71
TRAPPC1-207ENST00000575639 LY6G6CO95867 125 aa10.6□□□□□ -0.71
TRAPPC1-207ENST00000575639 IFNA1P01562 189 aa10.6□□□□□ -0.71
TRAPPC1-207ENST00000575639 LINC00612Q8N6U2 182 aa10.6□□□□□ -0.71
TRAPPC1-207ENST00000575639 LINC00476Q8WZB0 136 aa10.6□□□□□ -0.71
TRAPPC1-207ENST00000575639 TXNDC17Q9BRA2 123 aa10.6□□□□□ -0.71
TRAPPC1-207ENST00000575639 APLNQ9ULZ1 77 aa10.6□□□□□ -0.71
TRAPPC1-207ENST00000575639 KLF12Q9Y4X4 402 aa10.6□□□□□ -0.71
TRAPPC1-207ENST00000575639 TRBV6-1A0A0K0K1D8 114 aa10.59□□□□□ -0.71
TRAPPC1-207ENST00000575639 SPINK4O60575 86 aa10.59□□□□□ -0.71
TRAPPC1-207ENST00000575639 BLOC1S1P78537 153 aa10.59□□□□□ -0.71
TRAPPC1-207ENST00000575639 CCL20P78556 96 aa10.59□□□□□ -0.71
TRAPPC1-207ENST00000575639 LGALS9BQ3B8N2 356 aa10.59□□□□□ -0.71
TRAPPC1-207ENST00000575639 LGALS9CQ6DKI2 356 aa10.59□□□□□ -0.71
TRAPPC1-207ENST00000575639 Q6ZTI0 123 aa10.59□□□□□ -0.71
TRAPPC1-207ENST00000575639 Q86TA4 180 aa10.59□□□□□ -0.71
TRAPPC1-207ENST00000575639 SPXQ9BT56 116 aa10.59□□□□□ -0.71
TRAPPC1-207ENST00000575639 FABP5P3A8MUU1 101 aa10.58□□□□□ -0.72
TRAPPC1-207ENST00000575639 ZNF80P51504 273 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC1-207ENST00000575639 ALKAL2Q6UX46 152 aa10.58□□□□□ -0.72
TRAPPC1-207ENST00000575639 MDFICQ9P1T7 246 aa10.58□□□□□ -0.72
TRAPPC1-207ENST00000575639 GNRH2O43555 120 aa10.57□□□□□ -0.72
TRAPPC1-207ENST00000575639 TAGLN2P37802 199 aaKnown RBP10.57□□□□□ -0.72
TRAPPC1-207ENST00000575639 TMEM88Q6PEY1 159 aa10.57□□□□□ -0.72
TRAPPC1-207ENST00000575639 C18orf15Q96N68 181 aa10.57□□□□□ -0.72
TRAPPC1-207ENST00000575639 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
TRAPPC1-207ENST00000575639 IGHV3-16A0A0C4DH30 117 aa10.56□□□□□ -0.72
TRAPPC1-207ENST00000575639 SCO2A0A1W2PP80 73 aa10.56□□□□□ -0.72
TRAPPC1-207ENST00000575639 LTAP01374 205 aa10.56□□□□□ -0.72
TRAPPC1-207ENST00000575639 OR5I1Q13606 314 aa10.56□□□□□ -0.72
TRAPPC1-207ENST00000575639 COX8CQ7Z4L0 72 aa10.56□□□□□ -0.72
TRAPPC1-207ENST00000575639 C15orf53Q8NAA6 179 aa10.56□□□□□ -0.72
TRAPPC1-207ENST00000575639 PLECQ15149 4684 aaKnown RBP10.55□□□□□ -0.72
TRAPPC1-207ENST00000575639 PDE6DO43924 150 aa10.55□□□□□ -0.72
TRAPPC1-207ENST00000575639 TYMSP04818 313 aa10.55□□□□□ -0.72
TRAPPC1-207ENST00000575639 P0DMU3 169 aa10.55□□□□□ -0.72
TRAPPC1-207ENST00000575639 FAM231AP0DMU4 169 aa10.55□□□□□ -0.72
TRAPPC1-207ENST00000575639 FAM231CP0DMU5 169 aa10.55□□□□□ -0.72
TRAPPC1-207ENST00000575639 FAM162BQ5T6X4 162 aa10.55□□□□□ -0.72
TRAPPC1-207ENST00000575639 MRPL16Q9NX20 251 aaKnown RBP10.55□□□□□ -0.72
TRAPPC1-207ENST00000575639 PCLOQ9Y6V0 5065 aa10.55□□□□□ -0.72
TRAPPC1-207ENST00000575639 M0R2P5 195 aa10.54□□□□□ -0.72
TRAPPC1-207ENST00000575639 ORM1P02763 201 aa10.54□□□□□ -0.72
TRAPPC1-207ENST00000575639 BCL2P10415 239 aa10.54□□□□□ -0.72
TRAPPC1-207ENST00000575639 MEF2BQ02080 365 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC1-207ENST00000575639 BAGE2Q86Y30 109 aa10.54□□□□□ -0.72
TRAPPC1-207ENST00000575639 RASL10AQ92737 203 aa10.54□□□□□ -0.72
TRAPPC1-207ENST00000575639 ZC2HC1AQ96GY0 325 aa10.54□□□□□ -0.72
TRAPPC1-207ENST00000575639 C11orf21Q9P2W6 132 aa10.54□□□□□ -0.72
TRAPPC1-207ENST00000575639 VAX2Q9UIW0 290 aa10.54□□□□□ -0.72
TRAPPC1-207ENST00000575639 S100A4P26447 101 aaKnown RBP10.53□□□□□ -0.72
TRAPPC1-207ENST00000575639 C11orf52Q96A22 123 aa10.53□□□□□ -0.72
TRAPPC1-207ENST00000575639 B4DEV8 164 aa10.52□□□□□ -0.73
TRAPPC1-207ENST00000575639 SH2D1AO60880 128 aa10.52□□□□□ -0.73
TRAPPC1-207ENST00000575639 NUDT3O95989 172 aa10.52□□□□□ -0.73
TRAPPC1-207ENST00000575639 RPL35P42766 123 aaKnown RBP10.52□□□□□ -0.73
TRAPPC1-207ENST00000575639 SLAQ13239 276 aa10.52□□□□□ -0.73
TRAPPC1-207ENST00000575639 ZNF674Q2M3X9 581 aa10.52□□□□□ -0.73
TRAPPC1-207ENST00000575639 LYSTQ99698 3801 aa10.52□□□□□ -0.73
TRAPPC1-207ENST00000575639 TRAV26-1A0A087WT03 109 aa10.51□□□□□ -0.73
TRAPPC1-207ENST00000575639 HOXA5P20719 270 aa10.51□□□□□ -0.73
TRAPPC1-207ENST00000575639 ASIPP42127 132 aa10.51□□□□□ -0.73
TRAPPC1-207ENST00000575639 CRIP1P50238 77 aa10.51□□□□□ -0.73
TRAPPC1-207ENST00000575639 NHLRC2Q8NBF2 726 aa10.51□□□□□ -0.73
TRAPPC1-207ENST00000575639 MED9Q9NWA0 146 aa10.51□□□□□ -0.73
TRAPPC1-207ENST00000575639 HERC2O95714 4834 aa10.51□□□□□ -0.73
TRAPPC1-207ENST00000575639 IGKV3D-20A0A0C4DH25 116 aa10.5□□□□□ -0.73
TRAPPC1-207ENST00000575639 IGHV3-53P01767 116 aa10.5□□□□□ -0.73
TRAPPC1-207ENST00000575639 ZNF876PQ49A33 203 aa10.5□□□□□ -0.73
TRAPPC1-207ENST00000575639 UBE2DNLQ8IWF7 75 aa10.5□□□□□ -0.73
TRAPPC1-207ENST00000575639 MLST8Q9BVC4 326 aa10.5□□□□□ -0.73
TRAPPC1-207ENST00000575639 A0A0J9YY99 117 aa10.49□□□□□ -0.73
TRAPPC1-207ENST00000575639 KRBOX1C9JBD0 128 aa10.49□□□□□ -0.73
TRAPPC1-207ENST00000575639 C9JCJ5 164 aa10.49□□□□□ -0.73
TRAPPC1-207ENST00000575639 H3BNG1 76 aa10.49□□□□□ -0.73
TRAPPC1-207ENST00000575639 M0R036 132 aa10.49□□□□□ -0.73
TRAPPC1-207ENST00000575639 GNG4P50150 75 aa10.49□□□□□ -0.73
TRAPPC1-207ENST00000575639 POM121L12Q8N7R1 296 aa10.49□□□□□ -0.73
TRAPPC1-207ENST00000575639 OR4C5Q8NGB2 326 aa10.49□□□□□ -0.73
TRAPPC1-207ENST00000575639 LYPD6BQ8NI32 183 aa10.49□□□□□ -0.73
TRAPPC1-207ENST00000575639 C9orf85Q96MD7 179 aa10.49□□□□□ -0.73
TRAPPC1-207ENST00000575639 DERL1Q9BUN8 251 aa10.49□□□□□ -0.73
TRAPPC1-207ENST00000575639 ALMS1Q8TCU4 4167 aa10.48□□□□□ -0.73
TRAPPC1-207ENST00000575639 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
TRAPPC1-207ENST00000575639 TRGV4A0A0C4DH28 118 aa10.48□□□□□ -0.73
TRAPPC1-207ENST00000575639 RBFOX3A6NFN3 312 aa10.48□□□□□ -0.73
TRAPPC1-207ENST00000575639 RNF212Q495C1 297 aa10.48□□□□□ -0.73
TRAPPC1-207ENST00000575639 LINC01559Q495D7 138 aa10.48□□□□□ -0.73
TRAPPC1-207ENST00000575639 PTH2Q96A98 100 aa10.48□□□□□ -0.73
TRAPPC1-207ENST00000575639 PRO0255Q9UI72 69 aa10.48□□□□□ -0.73
TRAPPC1-207ENST00000575639 HHLA3Q9XRX5 114 aa10.48□□□□□ -0.73
TRAPPC1-207ENST00000575639 PAX4O43316 350 aa10.47□□□□□ -0.73
TRAPPC1-207ENST00000575639 RNASE3P12724 160 aaKnown RBP10.47□□□□□ -0.73
TRAPPC1-207ENST00000575639 CCL18P55774 89 aa10.47□□□□□ -0.73
TRAPPC1-207ENST00000575639 CENPWQ5EE01 88 aa10.47□□□□□ -0.73
TRAPPC1-207ENST00000575639 DNLZQ5SXM8 178 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms