RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 GNG13Q9P2W3 67 aa9.56□□□□□ -0.88
CIITA-210ENST00000575513 TRGV11A0A075B6L2 103 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 GAGE12BA1L429 117 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 GAGE7O76087 117 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 IFNA1P01562 189 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 GAGE12FP0CL80 117 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 GAGE12GP0CL81 117 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 GAGE12IP0CL82 117 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 Q6ZTI0 123 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 POM121L12Q8N7R1 296 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 FMC1Q96HJ9 113 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 KCNS1Q96KK3 526 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 SGK494Q96LW2 274 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 LINC00479Q96M42 142 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 SPXQ9BT56 116 aa9.55□□□□□ -0.88
CIITA-210ENST00000575513 TRAV34A0A0B4J273 112 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 H3BNG1 76 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 S100A9P06702 114 aaKnown RBP9.54□□□□□ -0.88
CIITA-210ENST00000575513 BCL2P10415 239 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 AKR1C3P42330 323 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 ZNF415Q09FC8 603 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 TMEM183BQ1AE95 376 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 RNF212Q495C1 297 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 COX8CQ7Z4L0 72 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 PRNTQ86SH4 94 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 Q86TA4 180 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 C11orf52Q96A22 123 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 ZFP30Q9Y2G7 519 aa9.54□□□□□ -0.88
CIITA-210ENST00000575513 DNAH6Q9C0G6 4158 aa9.53□□□□□ -0.88
CIITA-210ENST00000575513 TRGV2A0A075B6R0 118 aa9.53□□□□□ -0.88
CIITA-210ENST00000575513 TRGV1A0A0A0MS02 117 aa9.53□□□□□ -0.88
CIITA-210ENST00000575513 PFN1P07737 140 aaKnown RBP9.53□□□□□ -0.88
CIITA-210ENST00000575513 SMUG1Q53HV7 270 aa9.53□□□□□ -0.88
CIITA-210ENST00000575513 MUC21Q5SSG8 566 aa9.53□□□□□ -0.88
CIITA-210ENST00000575513 TEX261Q6UWH6 196 aa9.53□□□□□ -0.88
CIITA-210ENST00000575513 SCO2A0A1W2PP80 73 aa9.52□□□□□ -0.89
CIITA-210ENST00000575513 LTAP01374 205 aa9.52□□□□□ -0.89
CIITA-210ENST00000575513 FAM3BP58499 235 aaPredicted RBP9.52□□□□□ -0.89
CIITA-210ENST00000575513 UBE2G1P62253 170 aa9.52□□□□□ -0.89
CIITA-210ENST00000575513 MEF2BQ02080 365 aaPredicted RBP9.52□□□□□ -0.89
CIITA-210ENST00000575513 TMEM183AQ8IXX5 376 aa9.52□□□□□ -0.89
CIITA-210ENST00000575513 RASL10AQ92737 203 aa9.52□□□□□ -0.89
CIITA-210ENST00000575513 C8orf49Q96NF6 230 aa9.52□□□□□ -0.89
CIITA-210ENST00000575513 SDF2L1Q9HCN8 221 aa9.52□□□□□ -0.89
CIITA-210ENST00000575513 MDFICQ9P1T7 246 aa9.52□□□□□ -0.89
CIITA-210ENST00000575513 VAX2Q9UIW0 290 aa9.52□□□□□ -0.89
CIITA-210ENST00000575513 IGHV3-16A0A0C4DH30 117 aa9.51□□□□□ -0.89
CIITA-210ENST00000575513 GCGP01275 180 aa9.51□□□□□ -0.89
CIITA-210ENST00000575513 OR5I1Q13606 314 aa9.51□□□□□ -0.89
CIITA-210ENST00000575513 GNRH2O43555 120 aa9.5□□□□□ -0.89
CIITA-210ENST00000575513 PDE6DO43924 150 aa9.5□□□□□ -0.89
CIITA-210ENST00000575513 HOXA5P20719 270 aa9.5□□□□□ -0.89
CIITA-210ENST00000575513 ZNF80P51504 273 aaPredicted RBP9.5□□□□□ -0.89
CIITA-210ENST00000575513 SLAQ13239 276 aa9.5□□□□□ -0.89
CIITA-210ENST00000575513 NAGKQ9UJ70 344 aa9.5□□□□□ -0.89
CIITA-210ENST00000575513 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
CIITA-210ENST00000575513 FABP5P3A8MUU1 101 aa9.49□□□□□ -0.89
CIITA-210ENST00000575513 M0R2P5 195 aa9.49□□□□□ -0.89
CIITA-210ENST00000575513 NDUFS6O75380 124 aaKnown RBP9.49□□□□□ -0.89
CIITA-210ENST00000575513 TYMSP04818 313 aa9.49□□□□□ -0.89
CIITA-210ENST00000575513 ZNF506Q5JVG8 444 aa9.49□□□□□ -0.89
CIITA-210ENST00000575513 RBFOX3A6NFN3 312 aa9.48□□□□□ -0.89
CIITA-210ENST00000575513 NUDT3O95989 172 aa9.48□□□□□ -0.89
CIITA-210ENST00000575513 RPL35P42766 123 aaKnown RBP9.48□□□□□ -0.89
CIITA-210ENST00000575513 BAGE2Q86Y30 109 aa9.48□□□□□ -0.89
CIITA-210ENST00000575513 UBE2DNLQ8IWF7 75 aa9.48□□□□□ -0.89
CIITA-210ENST00000575513 PTH2Q96A98 100 aa9.48□□□□□ -0.89
CIITA-210ENST00000575513 MRPL16Q9NX20 251 aaKnown RBP9.48□□□□□ -0.89
CIITA-210ENST00000575513 C11orf21Q9P2W6 132 aa9.48□□□□□ -0.89
CIITA-210ENST00000575513 CCL18P55774 89 aa9.47□□□□□ -0.89
CIITA-210ENST00000575513 ZNF674Q2M3X9 581 aa9.47□□□□□ -0.89
CIITA-210ENST00000575513 ZC2HC1AQ96GY0 325 aa9.47□□□□□ -0.89
CIITA-210ENST00000575513 MLST8Q9BVC4 326 aa9.47□□□□□ -0.89
CIITA-210ENST00000575513 TMEM250H0YL14 139 aa9.46□□□□□ -0.9
CIITA-210ENST00000575513 CIDEAO60543 219 aa9.46□□□□□ -0.9
CIITA-210ENST00000575513 CRIP1P50238 77 aa9.46□□□□□ -0.9
CIITA-210ENST00000575513 FHL2Q14192 279 aa9.46□□□□□ -0.9
CIITA-210ENST00000575513 FAM162BQ5T6X4 162 aa9.46□□□□□ -0.9
CIITA-210ENST00000575513 SMIM12Q96EX1 92 aa9.46□□□□□ -0.9
CIITA-210ENST00000575513 VSIG2Q96IQ7 327 aa9.46□□□□□ -0.9
CIITA-210ENST00000575513 FAM210AQ96ND0 272 aa9.46□□□□□ -0.9
CIITA-210ENST00000575513 MED9Q9NWA0 146 aa9.46□□□□□ -0.9
CIITA-210ENST00000575513 PRO0255Q9UI72 69 aa9.46□□□□□ -0.9
CIITA-210ENST00000575513 HHLA3Q9XRX5 114 aa9.46□□□□□ -0.9
CIITA-210ENST00000575513 TRAV4A0A0B4J268 109 aa9.45□□□□□ -0.9
CIITA-210ENST00000575513 IGKV3D-20A0A0C4DH25 116 aa9.45□□□□□ -0.9
CIITA-210ENST00000575513 A0A0J9YY99 117 aa9.45□□□□□ -0.9
CIITA-210ENST00000575513 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
CIITA-210ENST00000575513 C9orf85Q96MD7 179 aa9.45□□□□□ -0.9
CIITA-210ENST00000575513 DERL1Q9BUN8 251 aa9.45□□□□□ -0.9
CIITA-210ENST00000575513 MUC4Q99102 2169 aa9.45□□□□□ -0.9
CIITA-210ENST00000575513 DNAH10Q8IVF4 4471 aa9.44□□□□□ -0.9
CIITA-210ENST00000575513 PAX4O43316 350 aa9.44□□□□□ -0.9
CIITA-210ENST00000575513 SH2D1AO60880 128 aa9.44□□□□□ -0.9
CIITA-210ENST00000575513 CRYBA4P53673 196 aa9.44□□□□□ -0.9
CIITA-210ENST00000575513 TOR2AQ5JU69 321 aa9.44□□□□□ -0.9
CIITA-210ENST00000575513 DNLZQ5SXM8 178 aa9.44□□□□□ -0.9
CIITA-210ENST00000575513 RAB19A4D1S5 217 aa9.43□□□□□ -0.9
CIITA-210ENST00000575513 IGHV3-53P01767 116 aa9.43□□□□□ -0.9
CIITA-210ENST00000575513 ORM1P02763 201 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms