RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 SPTA1P02549 2419 aa6.78□□□□□ -1.32
NCBP3-204ENST00000574911 ATRXP46100 2492 aa6.78□□□□□ -1.32
NCBP3-204ENST00000574911 IGKV2D-26A0A0A0MRZ7 120 aa6.78□□□□□ -1.32
NCBP3-204ENST00000574911 H3BUX3 64 aa6.78□□□□□ -1.32
NCBP3-204ENST00000574911 DPM2O94777 84 aa6.78□□□□□ -1.32
NCBP3-204ENST00000574911 IGHV3-11P01762 117 aa6.78□□□□□ -1.32
NCBP3-204ENST00000574911 SRSF1Q07955 248 aaKnown RBP eCLIP6.78□□□□□ -1.323e-9■■■■□ 23.5
NCBP3-204ENST00000574911 C9orf118A6NHY6 69 aa6.77□□□□□ -1.33
NCBP3-204ENST00000574911 RBX1P62877 108 aa6.77□□□□□ -1.33
NCBP3-204ENST00000574911 MYOZ3Q8TDC0 251 aa6.77□□□□□ -1.33
NCBP3-204ENST00000574911 TMEM8BA6NDV4 472 aa6.77□□□□□ -1.33
NCBP3-204ENST00000574911 IGLV1-40P01703 118 aa6.77□□□□□ -1.33
NCBP3-204ENST00000574911 MED14OSP0DP75 135 aa6.77□□□□□ -1.33
NCBP3-204ENST00000574911 DEFB1P60022 68 aa6.77□□□□□ -1.33
NCBP3-204ENST00000574911 BLCAPP62952 87 aa6.77□□□□□ -1.33
NCBP3-204ENST00000574911 Q6ZS46 218 aa6.77□□□□□ -1.33
NCBP3-204ENST00000574911 HIGD1BQ9P298 99 aa6.77□□□□□ -1.33
NCBP3-204ENST00000574911 IGHV4-30-2A0A087WSY4 118 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 PF4V1P10720 104 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 HLA-DRB4P13762 266 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 CFHR3Q02985 330 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 CLEC2AQ6UVW9 174 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 SMIM2Q9BVW6 85 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 HLA-DRB4X5D2U9 266 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 TRBV7-9A0A0J9YWB2 115 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 ASIPP42127 132 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 ANXA2RQ3ZCQ2 193 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 GTSCR1Q86UQ5 136 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 JMJD8Q96S16 334 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 RHPN1-AS1Q9BWJ2 59 aa6.76□□□□□ -1.33
NCBP3-204ENST00000574911 WNK2Q9Y3S1 2297 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 A0A087WX48 190 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 MSMBP08118 114 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 UFSP1Q6NVU6 142 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 RASL10AQ92737 203 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 DPH3P1Q9H4G8 78 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 MRPL35Q9NZE8 188 aaKnown RBP6.75□□□□□ -1.33
NCBP3-204ENST00000574911 A0A0G2JLM5 398 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 RNF223E7ERA6 249 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 F6UB75 175 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 M0R381 172 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 SPRY2O43597 315 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 RNASE4P34096 147 aaKnown RBP6.75□□□□□ -1.33
NCBP3-204ENST00000574911 CDKN1BP46527 198 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 ATP5J2P56134 94 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 ZC2HC1BQ5TFG8 222 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 LCNL1Q6ZST4 164 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 C20orf78Q9BR46 151 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 CST9LQ9H4G1 147 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 TMEM160Q9NX00 188 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 ABCA2Q9BZC7 2435 aa6.75□□□□□ -1.33
NCBP3-204ENST00000574911 TRAV12-1A0A0B4J245 112 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 S100A4P26447 101 aaKnown RBP6.74□□□□□ -1.33
NCBP3-204ENST00000574911 RPL11P62913 178 aaKnown RBP6.74□□□□□ -1.33
NCBP3-204ENST00000574911 ORMDL2Q53FV1 153 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 POM121L12Q8N7R1 296 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 TTTY13Q9BZ97 58 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 PHLDA3Q9Y5J5 127 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 VPS13CQ709C8 3753 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 HIVEP3Q5T1R4 2406 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 ASH1LQ9NR48 2969 aaKnown RBP6.74□□□□□ -1.33
NCBP3-204ENST00000574911 GAGE10A6NGK3 116 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 K7EMT4 169 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 GNRH2O43555 120 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 RNASE3P12724 160 aaKnown RBP6.74□□□□□ -1.33
NCBP3-204ENST00000574911 SUMO2P61956 95 aaKnown RBP6.74□□□□□ -1.33
NCBP3-204ENST00000574911 C14orf178Q8N769 122 aaPredicted RBP6.74□□□□□ -1.33
NCBP3-204ENST00000574911 AP1S3Q96PC3 154 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 CHAC1Q9BUX1 264 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 ZNF580Q9UK33 172 aa6.74□□□□□ -1.33
NCBP3-204ENST00000574911 COL6A6A6NMZ7 2263 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 GAGE12BA1L429 117 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 H3BUT2 72 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 K7EMI3 77 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 AVPP01185 164 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 SLC25A16P16260 332 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 TOMM6Q96B49 74 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 RPL39LQ96EH5 51 aaKnown RBP6.73□□□□□ -1.33
NCBP3-204ENST00000574911 DAZ1Q9NQZ3 744 aaKnown RBP6.73□□□□□ -1.33
NCBP3-204ENST00000574911 NBASA2RRP1 2371 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 IGKV3-7A0A075B6H7 116 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 TRBV25-1A0A075B6N4 114 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.73□□□□□ -1.33
NCBP3-204ENST00000574911 NXPH4O95158 308 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 GTF2H5Q6ZYL4 71 aa6.73□□□□□ -1.33
NCBP3-204ENST00000574911 MED13LQ71F56 2210 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 KLLNB2CW77 178 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 H7C1H1 209 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 K7EP34 96 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 EDN2P20800 178 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 PLNP26678 52 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 OCIAD2Q56VL3 154 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 MAPKAPK5-AS1Q8N8E1 139 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 F8VRH5 84 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 SMIM13P0DJ93 91 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 FXYD2P54710 66 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 RAB37Q96AX2 223 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 SCGB3A1Q96QR1 104 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 KIF25-AS1Q9Y6Z4 181 aa6.72□□□□□ -1.33
NCBP3-204ENST00000574911 ITPR1Q14643 2758 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms