RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 PLA2G2CQ5R387 149 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 ZFAND6Q6FIF0 208 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 C21orf62Q9NYP8 219 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 POLEQ07864 2286 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 IGHV3-66A0A0C4DH42 116 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 IGHV7-4-1A0A0J9YVY3 117 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 GAGE5Q13069 117 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 GAGE6Q13070 117 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 ANKRD29Q8N6D5 301 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 TEX29Q8N6K0 151 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 NEXN-AS1Q8NBZ9 246 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 GVINP1Q7Z2Y8 2422 aa11.08□□□□□ -0.64
SMG6-215ENST00000574501 ZNF883P0CG24 379 aa11.07□□□□□ -0.64
SMG6-215ENST00000574501 PCNX1Q96RV3 2341 aa11.07□□□□□ -0.64
SMG6-215ENST00000574501 CNOT1A5YKK6 2376 aaKnown RBP11.07□□□□□ -0.64
SMG6-215ENST00000574501 IGLV11-55A0A075B6I3 123 aa11.07□□□□□ -0.64
SMG6-215ENST00000574501 A8MWV9 139 aa11.07□□□□□ -0.64
SMG6-215ENST00000574501 LYNX1G3V0Z9 82 aa11.07□□□□□ -0.64
SMG6-215ENST00000574501 CD7P09564 240 aa11.07□□□□□ -0.64
SMG6-215ENST00000574501 LYNX1P0DP58 116 aa11.07□□□□□ -0.64
SMG6-215ENST00000574501 IGFL2Q6UWQ7 119 aa11.07□□□□□ -0.64
SMG6-215ENST00000574501 SMIM2Q9BVW6 85 aa11.07□□□□□ -0.64
SMG6-215ENST00000574501 KAAG1Q9UBP8 84 aa11.07□□□□□ -0.64
SMG6-215ENST00000574501 NBR2O15453 112 aa11.06□□□□□ -0.64
SMG6-215ENST00000574501 NDUFA11Q86Y39 141 aa11.06□□□□□ -0.64
SMG6-215ENST00000574501 BAALCQ8WXS3 180 aa11.06□□□□□ -0.64
SMG6-215ENST00000574501 RASL10AQ92737 203 aa11.06□□□□□ -0.64
SMG6-215ENST00000574501 IGHV3OR16-13A0A075B7E8 117 aa11.06□□□□□ -0.64
SMG6-215ENST00000574501 IGHV3-74A0A0B4J1X5 117 aa11.06□□□□□ -0.64
SMG6-215ENST00000574501 EMP1P54849 157 aa11.06□□□□□ -0.64
SMG6-215ENST00000574501 HES1Q14469 280 aa11.06□□□□□ -0.64
SMG6-215ENST00000574501 SCGB1C2P0DMR2 95 aa11.05□□□□□ -0.64
SMG6-215ENST00000574501 PRTN3P24158 256 aa11.05□□□□□ -0.64
SMG6-215ENST00000574501 DEFB104AQ8WTQ1 72 aa11.05□□□□□ -0.64
SMG6-215ENST00000574501 TOMM6Q96B49 74 aa11.05□□□□□ -0.64
SMG6-215ENST00000574501 AGPAT4-IT1Q9H0P7 198 aa11.05□□□□□ -0.64
SMG6-215ENST00000574501 CTSGP08311 255 aa11.05□□□□□ -0.64
SMG6-215ENST00000574501 NHLRC4P0CG21 123 aaPredicted RBP11.05□□□□□ -0.64
SMG6-215ENST00000574501 COX6B1P14854 86 aa11.05□□□□□ -0.64
SMG6-215ENST00000574501 DEFB109BQ30KR1 87 aa11.05□□□□□ -0.64
SMG6-215ENST00000574501 RPL39LQ96EH5 51 aaKnown RBP11.05□□□□□ -0.64
SMG6-215ENST00000574501 CDX4O14627 284 aaPredicted RBP11.04□□□□□ -0.64
SMG6-215ENST00000574501 OR11H6Q8NGC7 330 aa11.04□□□□□ -0.64
SMG6-215ENST00000574501 DYNLRB1Q9NP97 96 aa11.04□□□□□ -0.64
SMG6-215ENST00000574501 TRBV20-1A0A075B6N2 111 aa11.04□□□□□ -0.64
SMG6-215ENST00000574501 NDPQ00604 133 aa11.04□□□□□ -0.64
SMG6-215ENST00000574501 RNASE6Q93091 150 aaKnown RBP11.04□□□□□ -0.64
SMG6-215ENST00000574501 ARHGAP32A7KAX9 2087 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 LY6LH3BQJ8 138 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 J3KRW8 73 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 CFC1BP0CG36 223 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 CFC1P0CG37 223 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 ORMDL2Q53FV1 153 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 C2orf66Q6UXQ4 117 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 Q6ZS46 218 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 AJUBAQ96IF1 538 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 RNF5Q99942 180 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 NBL1P41271 181 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 SUMO2P61956 95 aaKnown RBP11.03□□□□□ -0.64
SMG6-215ENST00000574501 LYRM7Q5U5X0 104 aa11.03□□□□□ -0.64
SMG6-215ENST00000574501 IGHV3-49A0A0A0MS15 119 aa11.02□□□□□ -0.65
SMG6-215ENST00000574501 CRIP2P52943 208 aaPredicted RBP11.02□□□□□ -0.65
SMG6-215ENST00000574501 SBSPONQ8IVN8 264 aa11.02□□□□□ -0.65
SMG6-215ENST00000574501 CITED1Q99966 193 aa11.02□□□□□ -0.65
SMG6-215ENST00000574501 VCX2Q9H322 139 aa11.02□□□□□ -0.65
SMG6-215ENST00000574501 MSRB2Q9Y3D2 182 aa11.02□□□□□ -0.65
SMG6-215ENST00000574501 A0A0J9YY99 117 aa11.01□□□□□ -0.65
SMG6-215ENST00000574501 M0R381 172 aa11.01□□□□□ -0.65
SMG6-215ENST00000574501 BSNQ9UPA5 3926 aa11.01□□□□□ -0.65
SMG6-215ENST00000574501 TRAV8-2A0A0B4J237 113 aa11.01□□□□□ -0.65
SMG6-215ENST00000574501 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.01□□□□□ -0.65
SMG6-215ENST00000574501 TRPT1Q86TN4 253 aaKnown RBP11.01□□□□□ -0.65
SMG6-215ENST00000574501 RAX2Q96IS3 184 aa11.01□□□□□ -0.65
SMG6-215ENST00000574501 ASH1LQ9NR48 2969 aaKnown RBP11.01□□□□□ -0.65
SMG6-215ENST00000574501 TRAV4A0A0B4J268 109 aa11□□□□□ -0.65
SMG6-215ENST00000574501 TMEM262E9PQX1 116 aa11□□□□□ -0.65
SMG6-215ENST00000574501 CRLF1O75462 422 aa11□□□□□ -0.65
SMG6-215ENST00000574501 SLC50A1Q9BRV3 221 aa11□□□□□ -0.65
SMG6-215ENST00000574501 C11orf86A6NJI1 115 aa11□□□□□ -0.65
SMG6-215ENST00000574501 C9JAW5 83 aa11□□□□□ -0.65
SMG6-215ENST00000574501 CCDC179H3BU77 68 aa11□□□□□ -0.65
SMG6-215ENST00000574501 SLC25A20O43772 301 aa11□□□□□ -0.65
SMG6-215ENST00000574501 C14orf178Q8N769 122 aaPredicted RBP11□□□□□ -0.65
SMG6-215ENST00000574501 ZFHX3Q15911 3703 aa11□□□□□ -0.65
SMG6-215ENST00000574501 C10orf126Q8N4M7 172 aa10.99□□□□□ -0.65
SMG6-215ENST00000574501 HIF1ANQ9NWT6 349 aa10.99□□□□□ -0.65
SMG6-215ENST00000574501 H7C2G1 150 aa10.99□□□□□ -0.65
SMG6-215ENST00000574501 DUSP14O95147 198 aaKnown RBP10.99□□□□□ -0.65
SMG6-215ENST00000574501 IGHV3-30P01768 117 aa10.99□□□□□ -0.65
SMG6-215ENST00000574501 CRYGDP07320 174 aa10.99□□□□□ -0.65
SMG6-215ENST00000574501 MGPP08493 103 aa10.99□□□□□ -0.65
SMG6-215ENST00000574501 IGHV3-30-5P0DP03 117 aa10.99□□□□□ -0.65
SMG6-215ENST00000574501 NDUFV3P56181 108 aaKnown RBP10.99□□□□□ -0.65
SMG6-215ENST00000574501 GAGE2BQ13066 116 aa10.99□□□□□ -0.65
SMG6-215ENST00000574501 GAGE2EQ4V326 116 aa10.99□□□□□ -0.65
SMG6-215ENST00000574501 GAGE2DQ9UEU5 116 aa10.99□□□□□ -0.65
SMG6-215ENST00000574501 RBAKDNA6NC62 111 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 RHODO00212 210 aa10.98□□□□□ -0.65
SMG6-215ENST00000574501 BUB3O43684 328 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms