RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 AP5S1Q9NUS5 200 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 RIPPLY3P57055 190 aa7.77□□□□□ -1.16
SMG6-213ENST00000573166 ZNF415Q09FC8 603 aa7.77□□□□□ -1.16
SMG6-213ENST00000573166 IGKV1D-37A0A075B6S9 117 aa7.77□□□□□ -1.17
SMG6-213ENST00000573166 IZUMO1RA6ND01 250 aa7.77□□□□□ -1.17
SMG6-213ENST00000573166 SERF1AO75920 110 aa7.77□□□□□ -1.17
SMG6-213ENST00000573166 BTF3P20290 206 aaKnown RBP7.77□□□□□ -1.17
SMG6-213ENST00000573166 TSKUQ8WUA8 353 aa7.77□□□□□ -1.17
SMG6-213ENST00000573166 VGLL1Q99990 258 aa7.77□□□□□ -1.17
SMG6-213ENST00000573166 MUC3AQ02505 3323 aa7.77□□□□□ -1.17
SMG6-213ENST00000573166 PFN1P07737 140 aaKnown RBP7.77□□□□□ -1.17
SMG6-213ENST00000573166 PSMB8P28062 276 aa7.77□□□□□ -1.17
SMG6-213ENST00000573166 APOC4P55056 127 aa7.77□□□□□ -1.17
SMG6-213ENST00000573166 KIR2DL4Q99706 377 aa7.77□□□□□ -1.17
SMG6-213ENST00000573166 A0A1B0GV72 72 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 F2Z2F3 143 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 SHISA2Q6UWI4 295 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 TMEM75Q8N9X5 138 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 PRR25Q96S07 402 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 UBE2L6O14933 153 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 APOHP02749 345 aaPredicted RBP7.76□□□□□ -1.17
SMG6-213ENST00000573166 DEFB130BP0DP73 79 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 DEFB130AP0DP74 79 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 FABP2P12104 132 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 FOXI2Q6ZQN5 318 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 MRAPQ8TCY5 172 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 KLK9Q9UKQ9 250 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 BAHCC1Q9P281 2608 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 PIFOQ8TCI5 191 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 UNC79Q9P2D8 2635 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 PSMB2P49721 201 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 C8orf49Q96NF6 230 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 MIEN1Q9BRT3 115 aa7.76□□□□□ -1.17
SMG6-213ENST00000573166 A0A1B0GW15 77 aa7.75□□□□□ -1.17
SMG6-213ENST00000573166 C7orf71A4D174 169 aa7.75□□□□□ -1.17
SMG6-213ENST00000573166 NUPR1O60356 82 aa7.75□□□□□ -1.17
SMG6-213ENST00000573166 AGPAT4-IT1Q9H0P7 198 aa7.75□□□□□ -1.17
SMG6-213ENST00000573166 LY96Q9Y6Y9 160 aa7.75□□□□□ -1.17
SMG6-213ENST00000573166 IGHV3-53P01767 116 aa7.75□□□□□ -1.17
SMG6-213ENST00000573166 EGR2P11161 476 aaPredicted RBP7.75□□□□□ -1.17
SMG6-213ENST00000573166 SMAGPQ0VAQ4 97 aa7.75□□□□□ -1.17
SMG6-213ENST00000573166 LYZL1Q6UWQ5 148 aa7.75□□□□□ -1.17
SMG6-213ENST00000573166 PRELID3AQ96N28 172 aa7.75□□□□□ -1.17
SMG6-213ENST00000573166 CACNG7P62955 275 aa7.75□□□□□ -1.17
SMG6-213ENST00000573166 FAM167A-AS1Q96KT0 104 aa7.75□□□□□ -1.17
SMG6-213ENST00000573166 SSBP4Q9BWG4 385 aaPredicted RBP7.75□□□□□ -1.17
SMG6-213ENST00000573166 INSL3P51460 131 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 A8MWP6 167 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 NUDT3O95989 172 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 PPP1R17O96001 155 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 ARMS2P0C7Q2 107 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 GCSHP23434 173 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 WIPF2Q8TF74 440 aaPredicted RBP7.74□□□□□ -1.17
SMG6-213ENST00000573166 SMIM12Q96EX1 92 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 TMEM160Q9NX00 188 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 ZNF256Q9Y2P7 627 aaPredicted RBP7.74□□□□□ -1.17
SMG6-213ENST00000573166 IGHV3-73A0A0B4J1V6 119 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 TMEM262E9PQX1 116 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 FRMD6-AS1P0C7T7 363 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 PMCHL2Q9BQD1 86 aa7.74□□□□□ -1.17
SMG6-213ENST00000573166 TRAV25A0A0B4J276 109 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 PRSS46E5RG02 174 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 TDRG1Q3Y452 100 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 TMEM238LA0A1B0GVL6 79 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 A6NJY4 79 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 ZNF876PQ49A33 203 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 ORMDL3Q8N138 153 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 RAB37Q96AX2 223 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 SNHG12Q9BXW3 62 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 LAMTOR2Q9Y2Q5 125 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 IGHV1OR15-1A0A075B7D0 117 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 IGLV1-40P01703 118 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 C18orf65Q6ZTR6 163 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 ATMQ13315 3056 aa7.73□□□□□ -1.17
SMG6-213ENST00000573166 IGKV3OR2-268A0A0C4DH90 116 aa7.72□□□□□ -1.17
SMG6-213ENST00000573166 DEFB1P60022 68 aa7.72□□□□□ -1.17
SMG6-213ENST00000573166 MRPL53Q96EL3 112 aaKnown RBP7.72□□□□□ -1.17
SMG6-213ENST00000573166 NDUFA7O95182 113 aa7.72□□□□□ -1.17
SMG6-213ENST00000573166 SNCGO76070 127 aa7.72□□□□□ -1.17
SMG6-213ENST00000573166 ANXA2RQ3ZCQ2 193 aa7.72□□□□□ -1.17
SMG6-213ENST00000573166 C11orf52Q96A22 123 aa7.72□□□□□ -1.17
SMG6-213ENST00000573166 TMEM213A2RRL7 107 aa7.71□□□□□ -1.17
SMG6-213ENST00000573166 OR10J3Q5JRS4 329 aa7.71□□□□□ -1.17
SMG6-213ENST00000573166 C14orf178Q8N769 122 aaPredicted RBP7.71□□□□□ -1.17
SMG6-213ENST00000573166 LGALS9O00182 355 aa7.71□□□□□ -1.18
SMG6-213ENST00000573166 YPEL4Q96NS1 127 aa7.71□□□□□ -1.18
SMG6-213ENST00000573166 ZNF324O75467 553 aaPredicted RBP7.71□□□□□ -1.18
SMG6-213ENST00000573166 CFHR3Q02985 330 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 NUP35Q8NFH5 326 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 ZC2HC1AQ96GY0 325 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 GNB1LQ9BYB4 327 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 ESM1Q9NQ30 184 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 ZNF492Q9P255 531 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 A0A087WWL8 130 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 PRAC2D3DTV9 90 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 ZMAT4Q9H898 229 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 LOC107984156A0A0G2JMH3 177 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 IGLC2P0DOY2 106 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 DEFB114Q30KQ6 69 aa7.7□□□□□ -1.18
SMG6-213ENST00000573166 ARL17AQ8IVW1 177 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms