RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 KIR2DL5BA0A0G2JPC4 375 aa12.51□□□□□ -0.41
RAB40B-206ENST00000571995 ID1P41134 155 aa12.51□□□□□ -0.41
RAB40B-206ENST00000571995 SCGB1D4Q6XE38 83 aa12.51□□□□□ -0.41
RAB40B-206ENST00000571995 KIR2DL5AQ8N109 375 aa12.51□□□□□ -0.41
RAB40B-206ENST00000571995 JMJD8Q96S16 334 aa12.51□□□□□ -0.41
RAB40B-206ENST00000571995 C20orf144Q9BQM9 153 aa12.51□□□□□ -0.41
RAB40B-206ENST00000571995 SLC50A1Q9BRV3 221 aa12.51□□□□□ -0.41
RAB40B-206ENST00000571995 SMAD5-AS1Q9Y6J3 95 aa12.51□□□□□ -0.41
RAB40B-206ENST00000571995 ASIPP42127 132 aa12.5□□□□□ -0.41
RAB40B-206ENST00000571995 IGHV3-64A0A075B6Q5 118 aa12.5□□□□□ -0.41
RAB40B-206ENST00000571995 WI2-2373I1.2A0A1W2PRP0 233 aa12.5□□□□□ -0.41
RAB40B-206ENST00000571995 Q5PR19 223 aa12.5□□□□□ -0.41
RAB40B-206ENST00000571995 TRBV7-1A0A0A6YYK4 115 aa12.5□□□□□ -0.41
RAB40B-206ENST00000571995 RAB9AP51151 201 aa12.5□□□□□ -0.41
RAB40B-206ENST00000571995 RIPPLY3P57055 190 aa12.5□□□□□ -0.41
RAB40B-206ENST00000571995 TMEM158Q8WZ71 300 aa12.5□□□□□ -0.41
RAB40B-206ENST00000571995 ITPR2Q14571 2701 aa12.49□□□□□ -0.41
RAB40B-206ENST00000571995 HOXA3O43365 443 aaPredicted RBP12.49□□□□□ -0.41
RAB40B-206ENST00000571995 HBDP02042 147 aa12.49□□□□□ -0.41
RAB40B-206ENST00000571995 LYPD1Q8N2G4 141 aa12.49□□□□□ -0.41
RAB40B-206ENST00000571995 C10orf105Q8TEF2 133 aa12.49□□□□□ -0.41
RAB40B-206ENST00000571995 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
RAB40B-206ENST00000571995 RPS20P60866 119 aaKnown RBP12.49□□□□□ -0.41
RAB40B-206ENST00000571995 AJUBAQ96IF1 538 aa12.49□□□□□ -0.41
RAB40B-206ENST00000571995 PDE6HQ13956 83 aa12.48□□□□□ -0.41
RAB40B-206ENST00000571995 RASL11AQ6T310 242 aa12.48□□□□□ -0.41
RAB40B-206ENST00000571995 PRSS22Q9GZN4 317 aa12.48□□□□□ -0.41
RAB40B-206ENST00000571995 CHCHD1Q96BP2 118 aaKnown RBP12.48□□□□□ -0.41
RAB40B-206ENST00000571995 TNFRSF6BO95407 300 aa12.48□□□□□ -0.41
RAB40B-206ENST00000571995 KRTAP10-9P60411 292 aa12.48□□□□□ -0.41
RAB40B-206ENST00000571995 SNRPD3P62318 126 aaKnown RBP12.48□□□□□ -0.41
RAB40B-206ENST00000571995 SRSF8Q9BRL6 282 aaKnown RBP12.48□□□□□ -0.41
RAB40B-206ENST00000571995 PRORYQ9H606 182 aa12.48□□□□□ -0.41
RAB40B-206ENST00000571995 YAE1D1Q9NRH1 226 aa12.48□□□□□ -0.41
RAB40B-206ENST00000571995 ANXA2RQ3ZCQ2 193 aa12.47□□□□□ -0.41
RAB40B-206ENST00000571995 A0A1B0GXF2 115 aa12.47□□□□□ -0.41
RAB40B-206ENST00000571995 F8W735 103 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-206ENST00000571995 H7C2G1 150 aa12.47□□□□□ -0.41
RAB40B-206ENST00000571995 LBHQ53QV2 105 aaPredicted RBP12.47□□□□□ -0.41
RAB40B-206ENST00000571995 IGKV3OR2-268A0A0C4DH90 116 aa12.47□□□□□ -0.41
RAB40B-206ENST00000571995 UBE2E2Q96LR5 201 aa12.47□□□□□ -0.41
RAB40B-206ENST00000571995 IGKV3D-20A0A0C4DH25 116 aa12.46□□□□□ -0.41
RAB40B-206ENST00000571995 PEF1Q9UBV8 284 aaKnown RBP12.46□□□□□ -0.41
RAB40B-206ENST00000571995 NBEAL2Q6ZNJ1 2754 aa12.46□□□□□ -0.41
RAB40B-206ENST00000571995 Q6AWC8 147 aa12.46□□□□□ -0.41
RAB40B-206ENST00000571995 C2orf70A6NJV1 201 aa12.46□□□□□ -0.42
RAB40B-206ENST00000571995 CT83Q5H943 113 aa12.46□□□□□ -0.42
RAB40B-206ENST00000571995 SCGB3A1Q96QR1 104 aa12.46□□□□□ -0.42
RAB40B-206ENST00000571995 VPS25Q9BRG1 176 aa12.46□□□□□ -0.42
RAB40B-206ENST00000571995 GFRA4Q9GZZ7 299 aa12.45□□□□□ -0.42
RAB40B-206ENST00000571995 DAZ1Q9NQZ3 744 aaKnown RBP12.45□□□□□ -0.42
RAB40B-206ENST00000571995 JPT2Q9H910 190 aa12.45□□□□□ -0.42
RAB40B-206ENST00000571995 URB1-AS1Q96HZ7 61 aa12.45□□□□□ -0.42
RAB40B-206ENST00000571995 PRM2P04554 102 aa12.44□□□□□ -0.42
RAB40B-206ENST00000571995 SRSF2Q01130 221 aaKnown RBP12.44□□□□□ -0.42
RAB40B-206ENST00000571995 SRSF9Q13242 221 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAB40B-206ENST00000571995 TRAV21A0A0B4J279 112 aa12.44□□□□□ -0.42
RAB40B-206ENST00000571995 DLEU1O43261 78 aa12.44□□□□□ -0.42
RAB40B-206ENST00000571995 DNLZQ5SXM8 178 aa12.43□□□□□ -0.42
RAB40B-206ENST00000571995 PCP2Q8IVA1 136 aa12.43□□□□□ -0.42
RAB40B-206ENST00000571995 LINC01356Q8N9X3 169 aa12.43□□□□□ -0.42
RAB40B-206ENST00000571995 DEFB131AP59861 70 aa12.43□□□□□ -0.42
RAB40B-206ENST00000571995 ANKRD39Q53RE8 183 aa12.43□□□□□ -0.42
RAB40B-206ENST00000571995 TMEM170BQ5T4T1 132 aa12.43□□□□□ -0.42
RAB40B-206ENST00000571995 ZNF124Q15973 351 aa12.43□□□□□ -0.42
RAB40B-206ENST00000571995 AMMECR1LQ6DCA0 310 aa12.43□□□□□ -0.42
RAB40B-206ENST00000571995 PET117Q6UWS5 81 aa12.43□□□□□ -0.42
RAB40B-206ENST00000571995 KLHL30-AS1Q8NEE0 82 aa12.43□□□□□ -0.42
RAB40B-206ENST00000571995 ZNF747Q9BV97 191 aa12.43□□□□□ -0.42
RAB40B-206ENST00000571995 H3BUT2 72 aa12.42□□□□□ -0.42
RAB40B-206ENST00000571995 IGHV3-53P01767 116 aa12.42□□□□□ -0.42
RAB40B-206ENST00000571995 RPL24P83731 157 aaKnown RBP12.42□□□□□ -0.42
RAB40B-206ENST00000571995 CD300EQ496F6 205 aaPredicted RBP12.42□□□□□ -0.42
RAB40B-206ENST00000571995 RPL39LQ96EH5 51 aaKnown RBP12.42□□□□□ -0.42
RAB40B-206ENST00000571995 UBR5O95071 2799 aaPredicted RBP12.42□□□□□ -0.42
RAB40B-206ENST00000571995 ZC2HC1BQ5TFG8 222 aa12.42□□□□□ -0.42
RAB40B-206ENST00000571995 LURAP1LQ8IV03 231 aa12.42□□□□□ -0.42
RAB40B-206ENST00000571995 IGHV3-16A0A0C4DH30 117 aa12.41□□□□□ -0.42
RAB40B-206ENST00000571995 NSUN5P1Q3KNT7 163 aa12.41□□□□□ -0.42
RAB40B-206ENST00000571995 BBC3Q96PG8 261 aaPredicted RBP12.41□□□□□ -0.42
RAB40B-206ENST00000571995 C11orf21Q9P2W6 132 aa12.41□□□□□ -0.42
RAB40B-206ENST00000571995 SLURP1P55000 103 aa12.41□□□□□ -0.42
RAB40B-206ENST00000571995 TMEM97Q5BJF2 176 aa12.41□□□□□ -0.42
RAB40B-206ENST00000571995 OR2K2Q8NGT1 345 aa12.41□□□□□ -0.42
RAB40B-206ENST00000571995 KLF5Q13887 457 aaPredicted RBP12.41□□□□□ -0.42
RAB40B-206ENST00000571995 C9orf139Q6ZV77 190 aa12.41□□□□□ -0.42
RAB40B-206ENST00000571995 SMIM12Q96EX1 92 aa12.41□□□□□ -0.42
RAB40B-206ENST00000571995 C20orf173Q96LM9 149 aa12.41□□□□□ -0.42
RAB40B-206ENST00000571995 C12orf54Q6X4T0 127 aa12.4□□□□□ -0.42
RAB40B-206ENST00000571995 DGAT2L7PQ6IED9 249 aa12.4□□□□□ -0.42
RAB40B-206ENST00000571995 Q8N976 141 aa12.4□□□□□ -0.42
RAB40B-206ENST00000571995 LINC01587Q99440 93 aa12.4□□□□□ -0.42
RAB40B-206ENST00000571995 OR11H1Q8NG94 326 aa12.4□□□□□ -0.42
RAB40B-206ENST00000571995 HIST1H4GQ99525 98 aa12.39□□□□□ -0.43
RAB40B-206ENST00000571995 ESDP10768 282 aa12.39□□□□□ -0.43
RAB40B-206ENST00000571995 XCL2Q9UBD3 114 aa12.39□□□□□ -0.43
RAB40B-206ENST00000571995 A0A0U1RRA0 63 aa12.39□□□□□ -0.43
RAB40B-206ENST00000571995 FAM231BA6NCW3 169 aa12.39□□□□□ -0.43
RAB40B-206ENST00000571995 MTURNQ8N3F0 131 aa12.39□□□□□ -0.43
RAB40B-206ENST00000571995 ZFAND3Q9H8U3 227 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms