RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 CCL19Q99731 98 aa0.67□□□□□ -2.3
CDC27-212ENST00000570818 SLC35B3Q9H1N7 401 aa0.67□□□□□ -2.3
CDC27-212ENST00000570818 MRPL36Q9P0J6 103 aaKnown RBP0.67□□□□□ -2.3
CDC27-212ENST00000570818 COMMD3Q9UBI1 195 aa0.67□□□□□ -2.3
CDC27-212ENST00000570818 METTL1Q9UBP6 276 aaKnown RBP0.67□□□□□ -2.3
CDC27-212ENST00000570818 HELZP42694 1942 aaKnown RBP0.67□□□□□ -2.3
CDC27-212ENST00000570818 ARAP1Q96P48 1450 aa0.67□□□□□ -2.3
CDC27-212ENST00000570818 A0A0G2JMM0 328 aa0.66□□□□□ -2.3
CDC27-212ENST00000570818 A0A1B0GW64 132 aa0.66□□□□□ -2.3
CDC27-212ENST00000570818 IGKCP01834 107 aa0.66□□□□□ -2.3
CDC27-212ENST00000570818 RBP4P02753 201 aa0.66□□□□□ -2.3
CDC27-212ENST00000570818 ADCYAP1P18509 176 aa0.66□□□□□ -2.3
CDC27-212ENST00000570818 SPINT3P49223 89 aa0.66□□□□□ -2.3
CDC27-212ENST00000570818 POLR2JP52435 117 aaKnown RBP0.66□□□□□ -2.3
CDC27-212ENST00000570818 CAV3P56539 151 aa0.66□□□□□ -2.3
CDC27-212ENST00000570818 FXYD6P3P58550 94 aa0.66□□□□□ -2.3
CDC27-212ENST00000570818 RHOHQ15669 191 aa0.66□□□□□ -2.3
CDC27-212ENST00000570818 OR4S1Q8NGB4 309 aa0.66□□□□□ -2.3
CDC27-212ENST00000570818 CTTNBP2Q8WZ74 1663 aa0.65□□□□□ -2.3
CDC27-212ENST00000570818 TRAV17A0A0B4J275 112 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 A6NN06 94 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 HIGD1CA8MV81 97 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 HLA-DRB4P13762 266 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 PLGLB1Q02325 96 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 XAF1Q6GPH4 301 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 LYPD5Q6UWN5 251 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 TMEM91Q6ZNR0 172 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 DMAC1Q96GE9 116 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 ATG5Q9H1Y0 275 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 MRPL35Q9NZE8 188 aaKnown RBP0.65□□□□□ -2.31
CDC27-212ENST00000570818 GSKIPQ9P0R6 139 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 HLA-DRB4X5D2U9 266 aa0.65□□□□□ -2.31
CDC27-212ENST00000570818 ARHGAP31Q2M1Z3 1444 aa0.64□□□□□ -2.31
CDC27-212ENST00000570818 YPEL1O60688 119 aa0.64□□□□□ -2.31
CDC27-212ENST00000570818 IGF2P01344 180 aa0.64□□□□□ -2.31
CDC27-212ENST00000570818 CD3DP04234 171 aa0.64□□□□□ -2.31
CDC27-212ENST00000570818 EVI2AP22794 236 aa0.64□□□□□ -2.31
CDC27-212ENST00000570818 SPINK9Q5DT21 86 aa0.64□□□□□ -2.31
CDC27-212ENST00000570818 ARHGEF10O15013 1369 aa0.64□□□□□ -2.31
CDC27-212ENST00000570818 KIDINS220Q9ULH0 1771 aa0.64□□□□□ -2.31
CDC27-212ENST00000570818 AFDNP55196 1824 aaKnown RBP0.64□□□□□ -2.31
CDC27-212ENST00000570818 CDK5RAP2Q96SN8 1893 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 LOC101927531A0A1B0GV80 90 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 FXYD1O00168 92 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 ARPC5O15511 151 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 AKR1D1P51857 326 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 CKS1BP61024 79 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 MORN2Q502X0 79 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 CLLU1Q5K131 121 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 SNX29P2Q8IUI4 249 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 ATOH7Q8N100 152 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 MMGT1Q8N4V1 131 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 TAS2R8Q9NYW2 309 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 DNAJC15Q9Y5T4 150 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 LRP5O75197 1615 aa0.63□□□□□ -2.31
CDC27-212ENST00000570818 ZDBF2Q9HCK1 2354 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 CDK12Q9NYV4 1490 aaPredicted RBP0.62□□□□□ -2.31
CDC27-212ENST00000570818 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
CDC27-212ENST00000570818 J3QR89 54 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 K7EIL1 84 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 APOC1P02654 83 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 ZNF137PP52743 207 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 NCS1P62166 190 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 FXYD3Q14802 87 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 ALX1Q15699 326 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 C6orf52Q5T4I8 152 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 SLC25A26Q70HW3 274 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 PLAC4Q8WY50 150 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 MAFIPQ8WZ33 124 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 LINC00208Q96KT6 92 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 VPS25Q9BRG1 176 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 NOP16Q9Y3C1 178 aaKnown RBP0.62□□□□□ -2.31
CDC27-212ENST00000570818 WDR97A6NE52 1622 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 PTPRGP23470 1445 aa0.62□□□□□ -2.31
CDC27-212ENST00000570818 TRBV10-1A0A0K0K1A3 114 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 CCKP06307 115 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 ZNF56Q15929 161 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 GLYATL3Q5SZD4 288 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 KRTAP19-3Q7Z4W3 81 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 ATP6V0E2Q8NHE4 81 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 PPDPFLQ8WWR9 84 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 SMIM3Q9BZL3 60 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 MYH13Q9UKX3 1938 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 RREB1Q92766 1687 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 FHAD1B1AJZ9 1412 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 CCDC171Q6TFL3 1326 aa0.61□□□□□ -2.31
CDC27-212ENST00000570818 ZCCHC6Q5VYS8 1495 aaKnown RBP0.61□□□□□ -2.31
CDC27-212ENST00000570818 LOC285556D6RIA3 1793 aa0.6□□□□□ -2.31
CDC27-212ENST00000570818 DLEC1Q9Y238 1755 aa0.6□□□□□ -2.31
CDC27-212ENST00000570818 TRAV2A0A0B4J234 112 aa0.6□□□□□ -2.31
CDC27-212ENST00000570818 NBDYA0A0U1RRE5 68 aa0.6□□□□□ -2.31
CDC27-212ENST00000570818 J3QLW9 94 aa0.6□□□□□ -2.31
CDC27-212ENST00000570818 M0R2Z0 102 aa0.6□□□□□ -2.31
CDC27-212ENST00000570818 HIST1H1AQ02539 215 aaPredicted RBP0.6□□□□□ -2.31
CDC27-212ENST00000570818 SMCO1Q147U7 214 aa0.6□□□□□ -2.31
CDC27-212ENST00000570818 SPINK13Q1W4C9 94 aa0.6□□□□□ -2.31
CDC27-212ENST00000570818 C10orf99Q6UWK7 81 aa0.6□□□□□ -2.31
CDC27-212ENST00000570818 C5orf56Q8N8D9 126 aa0.6□□□□□ -2.31
CDC27-212ENST00000570818 DYNLRB2Q8TF09 96 aa0.6□□□□□ -2.31
CDC27-212ENST00000570818 OVOS2A0A0J9YW53 1432 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms