RNA–Protein interactions for RNA: ENST00000570276.5

ULK3-222, Transcript of unc-51 like kinase 3, human

TSL 1 (best)

Gene ULK3, Length 2,951 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ULK3-222	ENST00000570276	TRAV4	A0A0B4J268	109 aa		13.23	□□□□□ -0.29
ULK3-222	ENST00000570276	IGF2R	P11717	2491 aa		13.22	□□□□□ -0.29
ULK3-222	ENST00000570276	NBR2	O15453	112 aa		13.22	□□□□□ -0.29
ULK3-222	ENST00000570276	ZNF575	Q86XF7	245 aa		13.22	□□□□□ -0.29
ULK3-222	ENST00000570276	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.22	□□□□□ -0.29
ULK3-222	ENST00000570276		F8W735	103 aa	Predicted RBP	13.22	□□□□□ -0.29
ULK3-222	ENST00000570276	TMEM158	Q8WZ71	300 aa		13.22	□□□□□ -0.29
ULK3-222	ENST00000570276	FAM110A	Q9BQ89	295 aa		13.22	□□□□□ -0.29
ULK3-222	ENST00000570276	KLK15	Q9H2R5	256 aa		13.22	□□□□□ -0.29
ULK3-222	ENST00000570276	ZNF493	Q6ZR52	646 aa		13.21	□□□□□ -0.29
ULK3-222	ENST00000570276	DYNAP	Q8N1N2	210 aa		13.21	□□□□□ -0.29
ULK3-222	ENST00000570276	DEFB104A	Q8WTQ1	72 aa		13.21	□□□□□ -0.29
ULK3-222	ENST00000570276	SMAD5-AS1	Q9Y6J3	95 aa		13.21	□□□□□ -0.29
ULK3-222	ENST00000570276	TRAV26-2	A0A0B4J265	109 aa		13.2	□□□□□ -0.3
ULK3-222	ENST00000570276		Q8NA96	180 aa		13.2	□□□□□ -0.3
ULK3-222	ENST00000570276		J3KRW8	73 aa		13.2	□□□□□ -0.3
ULK3-222	ENST00000570276	EFNA4	P52798	201 aa		13.2	□□□□□ -0.3
ULK3-222	ENST00000570276	FAM159A	Q6UWV7	190 aa		13.2	□□□□□ -0.3
ULK3-222	ENST00000570276	PPDPF	Q9H3Y8	114 aa		13.2	□□□□□ -0.3
ULK3-222	ENST00000570276	HOXA3	O43365	443 aa	Predicted RBP	13.2	□□□□□ -0.3
ULK3-222	ENST00000570276	IGHG4	P01861	327 aa		13.2	□□□□□ -0.3
ULK3-222	ENST00000570276	PTPRQ	Q9UMZ3	2332 aa		13.19	□□□□□ -0.3
ULK3-222	ENST00000570276	LY6L	H3BQJ8	138 aa		13.19	□□□□□ -0.3
ULK3-222	ENST00000570276	DPM2	O94777	84 aa		13.19	□□□□□ -0.3
ULK3-222	ENST00000570276	MFAP4	P55083	255 aa		13.19	□□□□□ -0.3
ULK3-222	ENST00000570276	C21orf62	Q9NYP8	219 aa		13.19	□□□□□ -0.3
ULK3-222	ENST00000570276	MUC6	Q6W4X9	2439 aa		13.19	□□□□□ -0.3
ULK3-222	ENST00000570276	ZNF672	Q499Z4	452 aa	Predicted RBP	13.19	□□□□□ -0.3
ULK3-222	ENST00000570276	DPM3	Q9P2X0	92 aa		13.19	□□□□□ -0.3
ULK3-222	ENST00000570276	DLX4	Q92988	240 aa	Predicted RBP	13.18	□□□□□ -0.3
ULK3-222	ENST00000570276		U3KQK5	164 aa		13.18	□□□□□ -0.3
ULK3-222	ENST00000570276	CD3E	P07766	207 aa		13.18	□□□□□ -0.3
ULK3-222	ENST00000570276	ANKRD29	Q8N6D5	301 aa		13.18	□□□□□ -0.3
ULK3-222	ENST00000570276	RNF185	Q96GF1	192 aa		13.18	□□□□□ -0.3
ULK3-222	ENST00000570276	GAGE12J	A6NER3	117 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	GAGE7	O76087	117 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	GAGE12F	P0CL80	117 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	GAGE12G	P0CL81	117 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	GAGE12I	P0CL82	117 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	GAGE4	Q13068	117 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	LYPD1	Q8N2G4	141 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	NDUFV3	P56181	108 aa	Known RBP	13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	TRBV6-1	A0A0K0K1D8	114 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	TRGV3	P03979	118 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	ATP5J2	P56134	94 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	IL17REL	Q6ZVW7	336 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	CITED1	Q99966	193 aa		13.17	□□□□□ -0.3
ULK3-222	ENST00000570276	TRBV7-3	A0A075B6L6	115 aa		13.16	□□□□□ -0.3
ULK3-222	ENST00000570276	CTSG	P08311	255 aa		13.16	□□□□□ -0.3
ULK3-222	ENST00000570276	GATD1	Q8NB37	220 aa		13.16	□□□□□ -0.3
ULK3-222	ENST00000570276	CFHR4	Q92496	578 aa		13.16	□□□□□ -0.3
ULK3-222	ENST00000570276	IGLV11-55	A0A075B6I3	123 aa		13.16	□□□□□ -0.3
ULK3-222	ENST00000570276	FABP5P3	A8MUU1	101 aa		13.16	□□□□□ -0.3
ULK3-222	ENST00000570276	TNFRSF6B	O95407	300 aa		13.16	□□□□□ -0.3
ULK3-222	ENST00000570276	TCL1B	O95988	128 aa		13.16	□□□□□ -0.3
ULK3-222	ENST00000570276	PPDPFL	Q8WWR9	84 aa		13.16	□□□□□ -0.3
ULK3-222	ENST00000570276		B9A039	149 aa		13.15	□□□□□ -0.3
ULK3-222	ENST00000570276	TRAV8-2	A0A0B4J237	113 aa		13.15	□□□□□ -0.3
ULK3-222	ENST00000570276	CRIP2	P52943	208 aa	Predicted RBP	13.15	□□□□□ -0.3
ULK3-222	ENST00000570276	GAGE2B	Q13066	116 aa		13.15	□□□□□ -0.3
ULK3-222	ENST00000570276	GAGE2E	Q4V326	116 aa		13.15	□□□□□ -0.3
ULK3-222	ENST00000570276	ZMAT4	Q9H898	229 aa		13.15	□□□□□ -0.3
ULK3-222	ENST00000570276	GAGE2D	Q9UEU5	116 aa		13.15	□□□□□ -0.3
ULK3-222	ENST00000570276	ZNF688	P0C7X2	276 aa		13.14	□□□□□ -0.31
ULK3-222	ENST00000570276	CDSN	Q15517	529 aa		13.14	□□□□□ -0.31
ULK3-222	ENST00000570276	ECSCR	Q19T08	205 aa		13.14	□□□□□ -0.31
ULK3-222	ENST00000570276	PLEKHB2	Q96CS7	222 aa		13.14	□□□□□ -0.31
ULK3-222	ENST00000570276	C11orf21	Q9P2W6	132 aa		13.14	□□□□□ -0.31
ULK3-222	ENST00000570276		H7C2G1	150 aa		13.14	□□□□□ -0.31
ULK3-222	ENST00000570276	MAP1LC3A	Q9H492	121 aa		13.14	□□□□□ -0.31
ULK3-222	ENST00000570276	RPL7	P18124	248 aa	Known RBP	13.14	□□□□□ -0.31
ULK3-222	ENST00000570276	TTC32	Q5I0X7	151 aa		13.14	□□□□□ -0.31
ULK3-222	ENST00000570276	TEN1	Q86WV5	123 aa		13.14	□□□□□ -0.31
ULK3-222	ENST00000570276	KLHL30-AS1	Q8NEE0	82 aa		13.14	□□□□□ -0.31
ULK3-222	ENST00000570276	IGLC6	P0CF74	106 aa		13.13	□□□□□ -0.31
ULK3-222	ENST00000570276	DTX2	Q86UW9	622 aa		13.13	□□□□□ -0.31
ULK3-222	ENST00000570276	ARL3	P36405	182 aa		13.13	□□□□□ -0.31
ULK3-222	ENST00000570276	TNFRSF18	Q9Y5U5	241 aa		13.13	□□□□□ -0.31
ULK3-222	ENST00000570276		M0QXV9	152 aa		13.12	□□□□□ -0.31
ULK3-222	ENST00000570276	DEFB1	P60022	68 aa		13.12	□□□□□ -0.31
ULK3-222	ENST00000570276	VKORC1	Q9BQB6	163 aa		13.12	□□□□□ -0.31
ULK3-222	ENST00000570276	RAB1B	Q9H0U4	201 aa		13.12	□□□□□ -0.31
ULK3-222	ENST00000570276	EMP1	P54849	157 aa		13.11	□□□□□ -0.31
ULK3-222	ENST00000570276	PDE6H	Q13956	83 aa		13.11	□□□□□ -0.31
ULK3-222	ENST00000570276		A0A087WX48	190 aa		13.11	□□□□□ -0.31
ULK3-222	ENST00000570276	SCGB1C2	P0DMR2	95 aa		13.11	□□□□□ -0.31
ULK3-222	ENST00000570276	LINC00527	Q9UJ94	153 aa		13.11	□□□□□ -0.31
ULK3-222	ENST00000570276	VPS13C	Q709C8	3753 aa		13.11	□□□□□ -0.31
ULK3-222	ENST00000570276	IGKV3D-20	A0A0C4DH25	116 aa		13.11	□□□□□ -0.31
ULK3-222	ENST00000570276	SCGB1D4	Q6XE38	83 aa		13.11	□□□□□ -0.31
ULK3-222	ENST00000570276	TRPT1	Q86TN4	253 aa	Known RBP	13.11	□□□□□ -0.31
ULK3-222	ENST00000570276	MEIG1	Q5JSS6	88 aa		13.1	□□□□□ -0.31
ULK3-222	ENST00000570276		G3V318	75 aa		13.1	□□□□□ -0.31
ULK3-222	ENST00000570276	SNCG	O76070	127 aa		13.1	□□□□□ -0.31
ULK3-222	ENST00000570276	IGF1	P05019	195 aa		13.1	□□□□□ -0.31
ULK3-222	ENST00000570276	C15orf32	Q32M92	178 aa		13.1	□□□□□ -0.31
ULK3-222	ENST00000570276	RHOD	O00212	210 aa		13.09	□□□□□ -0.31
ULK3-222	ENST00000570276	LGALS1	P09382	135 aa	Known RBP	13.09	□□□□□ -0.31
ULK3-222	ENST00000570276	SPG11	Q96JI7	2443 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms