RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 GATA1P15976 413 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-220ENST00000569827 CSN1S1P47710 185 aa8.02□□□□□ -1.13
CAPN3-220ENST00000569827 UBE2L3P68036 154 aaKnown RBP8.02□□□□□ -1.13
CAPN3-220ENST00000569827 LRRC37A5PQ49AS3 106 aa8.02□□□□□ -1.13
CAPN3-220ENST00000569827 LINC01556Q5JQF7 62 aa8.02□□□□□ -1.13
CAPN3-220ENST00000569827 CHAC2Q8WUX2 184 aa8.02□□□□□ -1.13
CAPN3-220ENST00000569827 OR5AC2Q9NZP5 309 aa8.02□□□□□ -1.13
CAPN3-220ENST00000569827 UBR4Q5T4S7 5183 aa8.02□□□□□ -1.13
CAPN3-220ENST00000569827 TRAV8-1A0A0A6YYK1 113 aa8.01□□□□□ -1.13
CAPN3-220ENST00000569827 K7EP13 123 aa8.01□□□□□ -1.13
CAPN3-220ENST00000569827 M0R2P5 195 aa8.01□□□□□ -1.13
CAPN3-220ENST00000569827 ATP6V1FQ16864 119 aa8.01□□□□□ -1.13
CAPN3-220ENST00000569827 SLC25A29Q8N8R3 303 aa8.01□□□□□ -1.13
CAPN3-220ENST00000569827 TVP23CQ96ET8 276 aa8.01□□□□□ -1.13
CAPN3-220ENST00000569827 SGK494Q96LW2 274 aa8.01□□□□□ -1.13
CAPN3-220ENST00000569827 RBAKDNA6NC62 111 aa8□□□□□ -1.13
CAPN3-220ENST00000569827 H2AFB2P0C5Z0 115 aa8□□□□□ -1.13
CAPN3-220ENST00000569827 GNG5P63218 68 aa8□□□□□ -1.13
CAPN3-220ENST00000569827 DPPA3Q6W0C5 159 aa8□□□□□ -1.13
CAPN3-220ENST00000569827 WDR61Q9GZS3 305 aaKnown RBP8□□□□□ -1.13
CAPN3-220ENST00000569827 TRAV8-6A0A0B4J262 113 aa7.99□□□□□ -1.13
CAPN3-220ENST00000569827 TRBV7-9A0A0J9YWB2 115 aa7.99□□□□□ -1.13
CAPN3-220ENST00000569827 FBLL1A6NHQ2 334 aaKnown RBP7.99□□□□□ -1.13
CAPN3-220ENST00000569827 PLA2G1BP04054 148 aaKnown RBP7.99□□□□□ -1.13
CAPN3-220ENST00000569827 FFAR4Q5NUL3 377 aa7.99□□□□□ -1.13
CAPN3-220ENST00000569827 GOLT1AQ6ZVE7 132 aa7.99□□□□□ -1.13
CAPN3-220ENST00000569827 DNAJC30Q96LL9 226 aa7.99□□□□□ -1.13
CAPN3-220ENST00000569827 KRTAP29-1A8MX34 341 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-220ENST00000569827 H0YIZ8 118 aa7.98□□□□□ -1.13
CAPN3-220ENST00000569827 CNPY1Q3B7I2 92 aa7.98□□□□□ -1.13
CAPN3-220ENST00000569827 TDRG1Q3Y452 100 aa7.98□□□□□ -1.13
CAPN3-220ENST00000569827 TMEM75Q8N9X5 138 aa7.98□□□□□ -1.13
CAPN3-220ENST00000569827 SMIM3Q9BZL3 60 aa7.98□□□□□ -1.13
CAPN3-220ENST00000569827 C11orf21Q9P2W6 132 aa7.98□□□□□ -1.13
CAPN3-220ENST00000569827 PGPA6NDG6 321 aa7.97□□□□□ -1.13
CAPN3-220ENST00000569827 HMGB3O15347 200 aaKnown RBP7.97□□□□□ -1.13
CAPN3-220ENST00000569827 TIRAPP58753 221 aa7.97□□□□□ -1.13
CAPN3-220ENST00000569827 ZNF876PQ49A33 203 aa7.97□□□□□ -1.13
CAPN3-220ENST00000569827 CFAP126Q5VTH2 177 aa7.97□□□□□ -1.13
CAPN3-220ENST00000569827 Q6ZSA8 131 aa7.97□□□□□ -1.13
CAPN3-220ENST00000569827 SCXQ7RTU7 201 aa7.97□□□□□ -1.13
CAPN3-220ENST00000569827 DAZ4Q86SG3 579 aaKnown RBP7.97□□□□□ -1.13
CAPN3-220ENST00000569827 BAALCQ8WXS3 180 aa7.97□□□□□ -1.13
CAPN3-220ENST00000569827 NMES1Q9C002 83 aa7.97□□□□□ -1.13
CAPN3-220ENST00000569827 SDF2L1Q9HCN8 221 aa7.97□□□□□ -1.13
CAPN3-220ENST00000569827 TREM1Q9NP99 234 aa7.97□□□□□ -1.13
CAPN3-220ENST00000569827 DAZ3Q9NR90 486 aaKnown RBP7.97□□□□□ -1.13
CAPN3-220ENST00000569827 TRAV21A0A0B4J279 112 aa7.96□□□□□ -1.14
CAPN3-220ENST00000569827 PFN1P07737 140 aaKnown RBP7.96□□□□□ -1.14
CAPN3-220ENST00000569827 ZNF80P51504 273 aaPredicted RBP7.96□□□□□ -1.14
CAPN3-220ENST00000569827 RHOHQ15669 191 aa7.96□□□□□ -1.14
CAPN3-220ENST00000569827 KHDC3LQ587J8 217 aa7.96□□□□□ -1.14
CAPN3-220ENST00000569827 LELP1Q5T871 98 aa7.96□□□□□ -1.14
CAPN3-220ENST00000569827 SH2D6Q7Z4S9 175 aa7.96□□□□□ -1.14
CAPN3-220ENST00000569827 ASB13Q8WXK3 278 aa7.96□□□□□ -1.14
CAPN3-220ENST00000569827 OTORQ9NRC9 128 aa7.96□□□□□ -1.14
CAPN3-220ENST00000569827 Q9UF83 564 aa7.96□□□□□ -1.14
CAPN3-220ENST00000569827 FAM240BA0A1B0GVZ2 78 aa7.95□□□□□ -1.14
CAPN3-220ENST00000569827 RS1O15537 224 aa7.95□□□□□ -1.14
CAPN3-220ENST00000569827 ZNF506Q5JVG8 444 aa7.95□□□□□ -1.14
CAPN3-220ENST00000569827 ATP6V0E2Q8NHE4 81 aa7.95□□□□□ -1.14
CAPN3-220ENST00000569827 CMTM2Q8TAZ6 248 aa7.95□□□□□ -1.14
CAPN3-220ENST00000569827 DEFB104AQ8WTQ1 72 aa7.95□□□□□ -1.14
CAPN3-220ENST00000569827 PRADC1Q9BSG0 188 aa7.95□□□□□ -1.14
CAPN3-220ENST00000569827 KCNIP2Q9NS61 270 aa7.95□□□□□ -1.14
CAPN3-220ENST00000569827 MBD2Q9UBB5 411 aa7.95□□□□□ -1.14
CAPN3-220ENST00000569827 LENEPQ9Y5L5 61 aa7.95□□□□□ -1.14
CAPN3-220ENST00000569827 GAGE12JA6NER3 117 aa7.94□□□□□ -1.14
CAPN3-220ENST00000569827 PGPEP1LA6NFU8 196 aa7.94□□□□□ -1.14
CAPN3-220ENST00000569827 C17orf112F2Z3M2 114 aa7.94□□□□□ -1.14
CAPN3-220ENST00000569827 C1QBP02746 253 aa7.94□□□□□ -1.14
CAPN3-220ENST00000569827 KRTAP10-4P60372 401 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-220ENST00000569827 RAB2AP61019 212 aa7.94□□□□□ -1.14
CAPN3-220ENST00000569827 GAGE1Q13065 139 aa7.94□□□□□ -1.14
CAPN3-220ENST00000569827 GAGE4Q13068 117 aa7.94□□□□□ -1.14
CAPN3-220ENST00000569827 GAGE5Q13069 117 aa7.94□□□□□ -1.14
CAPN3-220ENST00000569827 GAGE13Q4V321 117 aa7.94□□□□□ -1.14
CAPN3-220ENST00000569827 ATP5SQ99766 215 aa7.94□□□□□ -1.14
CAPN3-220ENST00000569827 GTSF1LQ9H1H1 148 aa7.94□□□□□ -1.14
CAPN3-220ENST00000569827 TRBV6-4A0A1B0GX49 114 aa7.93□□□□□ -1.14
CAPN3-220ENST00000569827 TAS2R45P59539 299 aa7.93□□□□□ -1.14
CAPN3-220ENST00000569827 TMED6Q8WW62 240 aa7.93□□□□□ -1.14
CAPN3-220ENST00000569827 TM2D2Q9BX73 214 aa7.93□□□□□ -1.14
CAPN3-220ENST00000569827 LAGE3Q14657 143 aa7.92□□□□□ -1.14
CAPN3-220ENST00000569827 OR2T35Q8NGX2 323 aa7.92□□□□□ -1.14
CAPN3-220ENST00000569827 KCNS1Q96KK3 526 aa7.92□□□□□ -1.14
CAPN3-220ENST00000569827 C9orf85Q96MD7 179 aa7.92□□□□□ -1.14
CAPN3-220ENST00000569827 SAMD10Q9BYL1 202 aa7.92□□□□□ -1.14
CAPN3-220ENST00000569827 JPT2Q9H910 190 aa7.92□□□□□ -1.14
CAPN3-220ENST00000569827 WFDC1Q9HC57 220 aa7.92□□□□□ -1.14
CAPN3-220ENST00000569827 HSPB11Q9Y547 144 aa7.92□□□□□ -1.14
CAPN3-220ENST00000569827 GCGP01275 180 aa7.91□□□□□ -1.14
CAPN3-220ENST00000569827 IGLV2-8P01709 118 aa7.91□□□□□ -1.14
CAPN3-220ENST00000569827 RNASE3P12724 160 aaKnown RBP7.91□□□□□ -1.14
CAPN3-220ENST00000569827 H2BFSP57053 126 aa7.91□□□□□ -1.14
CAPN3-220ENST00000569827 C14orf178Q8N769 122 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-220ENST00000569827 PPP1R1CQ8WVI7 109 aa7.91□□□□□ -1.14
CAPN3-220ENST00000569827 IGKV2D-24A0A075B6R9 120 aa7.9□□□□□ -1.14
CAPN3-220ENST00000569827 RBFOX3A6NFN3 312 aa7.9□□□□□ -1.14
CAPN3-220ENST00000569827 ARL14EPLP0DKL9 152 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms