RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 Q9H8V8 135 aa9.15□□□□□ -0.94
SPG7-221ENST00000569720 ABCA13Q86UQ4 5058 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 TRAV12-3A0A0B4J271 114 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 TRBV6-1A0A0K0K1D8 114 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 GAGE12BA1L429 117 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 DIRC3C9JPN6 131 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 J3KRW8 73 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 GAGE7O76087 117 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 GAGE12FP0CL80 117 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 GAGE12GP0CL81 117 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 GAGE12IP0CL82 117 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 NDUFA5Q16718 116 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 EIF4E3Q8N5X7 224 aaKnown RBP9.14□□□□□ -0.95
SPG7-221ENST00000569720 LINC00612Q8N6U2 182 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 PYGO2Q9BRQ0 406 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 EIF5A2Q9GZV4 153 aaKnown RBP9.14□□□□□ -0.95
SPG7-221ENST00000569720 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
SPG7-221ENST00000569720 HSPG2P98160 4391 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 A0A0J9YY99 117 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 LINC00862A6NCI5 91 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 NPIPB6E9PJ23 425 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 H3BNG1 76 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 TCRAP04437 139 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 CT45A10P0DMU9 189 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 C9orf47Q6ZRZ4 202 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 EXOC3-AS1Q8N2X6 119 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 CYB561D1Q8N8Q1 229 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 C11orf52Q96A22 123 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 SMIM12Q96EX1 92 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 KLF12Q9Y4X4 402 aa9.13□□□□□ -0.95
SPG7-221ENST00000569720 GGTLC3B5MD39 225 aa9.12□□□□□ -0.95
SPG7-221ENST00000569720 CDK2AP2O75956 126 aa9.12□□□□□ -0.95
SPG7-221ENST00000569720 UBE2G2P60604 165 aa9.12□□□□□ -0.95
SPG7-221ENST00000569720 DAZ2Q13117 558 aaKnown RBP9.12□□□□□ -0.95
SPG7-221ENST00000569720 FAM74A3Q4VXF1 159 aa9.12□□□□□ -0.95
SPG7-221ENST00000569720 SAPCD1Q5SSQ6 148 aa9.12□□□□□ -0.95
SPG7-221ENST00000569720 TMEM75Q8N9X5 138 aa9.12□□□□□ -0.95
SPG7-221ENST00000569720 FMC1Q96HJ9 113 aa9.12□□□□□ -0.95
SPG7-221ENST00000569720 ZFP30Q9Y2G7 519 aa9.12□□□□□ -0.95
SPG7-221ENST00000569720 A0A1B0GV50 99 aa9.11□□□□□ -0.95
SPG7-221ENST00000569720 PEX7O00628 323 aa9.11□□□□□ -0.95
SPG7-221ENST00000569720 EIF3GO75821 320 aaKnown RBP eCLIP9.11□□□□□ -0.95
SPG7-221ENST00000569720 HOXA5P20719 270 aa9.11□□□□□ -0.95
SPG7-221ENST00000569720 TMEM78Q5T7P6 136 aa9.11□□□□□ -0.95
SPG7-221ENST00000569720 UPK3BQ9BT76 320 aa9.11□□□□□ -0.95
SPG7-221ENST00000569720 TRGV2A0A075B6R0 118 aa9.1□□□□□ -0.95
SPG7-221ENST00000569720 A0A1W2PPQ1 181 aa9.1□□□□□ -0.95
SPG7-221ENST00000569720 TMEM183BQ1AE95 376 aa9.1□□□□□ -0.95
SPG7-221ENST00000569720 ESRGQ1W209 222 aa9.1□□□□□ -0.95
SPG7-221ENST00000569720 NDFIP1Q9BT67 221 aa9.1□□□□□ -0.95
SPG7-221ENST00000569720 BIN3Q9NQY0 253 aa9.1□□□□□ -0.95
SPG7-221ENST00000569720 MRPS16Q9Y3D3 137 aaKnown RBP9.1□□□□□ -0.95
SPG7-221ENST00000569720 DNAH5Q8TE73 4624 aa9.1□□□□□ -0.95
SPG7-221ENST00000569720 C7orf71A4D174 169 aa9.09□□□□□ -0.95
SPG7-221ENST00000569720 M0R3E3 92 aa9.09□□□□□ -0.95
SPG7-221ENST00000569720 BTF3P20290 206 aaKnown RBP9.09□□□□□ -0.95
SPG7-221ENST00000569720 ZNF138P52744 262 aa9.09□□□□□ -0.95
SPG7-221ENST00000569720 UBE2G1P62253 170 aa9.09□□□□□ -0.95
SPG7-221ENST00000569720 TOR2AQ5JU69 321 aa9.09□□□□□ -0.95
SPG7-221ENST00000569720 Q6ZTI0 123 aa9.09□□□□□ -0.95
SPG7-221ENST00000569720 SPATA12Q7Z6I5 190 aa9.09□□□□□ -0.95
SPG7-221ENST00000569720 ZNF492Q9P255 531 aa9.09□□□□□ -0.95
SPG7-221ENST00000569720 LY96Q9Y6Y9 160 aa9.09□□□□□ -0.95
SPG7-221ENST00000569720 TRGV1A0A0A0MS02 117 aa9.08□□□□□ -0.96
SPG7-221ENST00000569720 GPX1P07203 203 aa9.08□□□□□ -0.96
SPG7-221ENST00000569720 AKR1C3P42330 323 aa9.08□□□□□ -0.96
SPG7-221ENST00000569720 FLI1Q01543 452 aaPredicted RBP9.08□□□□□ -0.96
SPG7-221ENST00000569720 ERCC8Q13216 396 aa9.08□□□□□ -0.96
SPG7-221ENST00000569720 ANXA2RQ3ZCQ2 193 aa9.08□□□□□ -0.96
SPG7-221ENST00000569720 GOLT1AQ6ZVE7 132 aa9.08□□□□□ -0.96
SPG7-221ENST00000569720 COX8CQ7Z4L0 72 aa9.08□□□□□ -0.96
SPG7-221ENST00000569720 MAPKAPK5-AS1Q8N8E1 139 aa9.08□□□□□ -0.96
SPG7-221ENST00000569720 LINC00467Q9BRT7 94 aa9.08□□□□□ -0.96
SPG7-221ENST00000569720 KRTAP4-5Q9BYR2 181 aa9.08□□□□□ -0.96
SPG7-221ENST00000569720 GSN-AS1Q9NRJ2 163 aa9.08□□□□□ -0.96
SPG7-221ENST00000569720 KLLNB2CW77 178 aa9.07□□□□□ -0.96
SPG7-221ENST00000569720 CRISP2P16562 243 aa9.07□□□□□ -0.96
SPG7-221ENST00000569720 RNASE4P34096 147 aaKnown RBP9.07□□□□□ -0.96
SPG7-221ENST00000569720 C18orf15Q96N68 181 aa9.07□□□□□ -0.96
SPG7-221ENST00000569720 KRTAP1-5Q9BYS1 174 aa9.07□□□□□ -0.96
SPG7-221ENST00000569720 AGPAT4-IT1Q9H0P7 198 aa9.07□□□□□ -0.96
SPG7-221ENST00000569720 APOBP04114 4563 aaKnown RBP9.06□□□□□ -0.96
SPG7-221ENST00000569720 C9JCJ5 164 aa9.06□□□□□ -0.96
SPG7-221ENST00000569720 ZNF324O75467 553 aaPredicted RBP9.06□□□□□ -0.96
SPG7-221ENST00000569720 SRP19P09132 144 aaKnown RBP9.06□□□□□ -0.96
SPG7-221ENST00000569720 BTN1A1Q13410 526 aa9.06□□□□□ -0.96
SPG7-221ENST00000569720 C11orf72Q8NBR9 251 aa9.06□□□□□ -0.96
SPG7-221ENST00000569720 PCNPQ8WW12 178 aaKnown RBP9.06□□□□□ -0.96
SPG7-221ENST00000569720 FAM19A4Q96LR4 140 aa9.06□□□□□ -0.96
SPG7-221ENST00000569720 PSG8Q9UQ74 426 aa9.06□□□□□ -0.96
SPG7-221ENST00000569720 A0A096LPF7 62 aa9.05□□□□□ -0.96
SPG7-221ENST00000569720 SCO2A0A1W2PP80 73 aa9.05□□□□□ -0.96
SPG7-221ENST00000569720 SPINK4O60575 86 aa9.05□□□□□ -0.96
SPG7-221ENST00000569720 LTAP01374 205 aa9.05□□□□□ -0.96
SPG7-221ENST00000569720 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
SPG7-221ENST00000569720 RPL35P42766 123 aaKnown RBP9.05□□□□□ -0.96
SPG7-221ENST00000569720 TCL1AP56279 114 aa9.05□□□□□ -0.96
SPG7-221ENST00000569720 IBA57Q5T440 356 aaKnown RBP9.05□□□□□ -0.96
SPG7-221ENST00000569720 TMEM183AQ8IXX5 376 aa9.05□□□□□ -0.96
SPG7-221ENST00000569720 VSIG2Q96IQ7 327 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms